RNA–Protein interactions for RNA: ENST00000482645.1

TRAPPC12-220, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 1,538 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-220ENST00000482645 APBA3O96018 575 aa26.11■■□□□ 1.77
TRAPPC12-220ENST00000482645 TNS1Q9HBL0 1735 aaKnown RBP26.11■■□□□ 1.77
TRAPPC12-220ENST00000482645 MRC1P22897 1456 aa26.1■■□□□ 1.77
TRAPPC12-220ENST00000482645 UPF1Q92900 1129 aaKnown RBP eCLIP26.09■■□□□ 1.77
TRAPPC12-220ENST00000482645 ASAP1Q9ULH1 1129 aa26.07■■□□□ 1.76
TRAPPC12-220ENST00000482645 SIPA1L3O60292 1781 aaPredicted RBP26.05■■□□□ 1.76
TRAPPC12-220ENST00000482645 WWC1Q8IX03 1113 aa26.05■■□□□ 1.76
TRAPPC12-220ENST00000482645 LAS1LQ9Y4W2 734 aaKnown RBP26.05■■□□□ 1.76
TRAPPC12-220ENST00000482645 BTBD11A6QL63 1104 aa26.04■■□□□ 1.76
TRAPPC12-220ENST00000482645 SLC39A6Q13433 755 aa26.04■■□□□ 1.76
TRAPPC12-220ENST00000482645 CCDC125Q86Z20 511 aa26.04■■□□□ 1.76
TRAPPC12-220ENST00000482645 MIS18AQ9NYP9 233 aa26.04■■□□□ 1.76
TRAPPC12-220ENST00000482645 TAF7Q15545 349 aaPredicted RBP26.04■■□□□ 1.76
TRAPPC12-220ENST00000482645 CCDC27Q2M243 656 aa26.04■■□□□ 1.76
TRAPPC12-220ENST00000482645 DEFB132Q7Z7B7 95 aa26.04■■□□□ 1.76
TRAPPC12-220ENST00000482645 ATG3Q9NT62 314 aa26.04■■□□□ 1.76
TRAPPC12-220ENST00000482645 BAG6P46379 1132 aa26.03■■□□□ 1.76
TRAPPC12-220ENST00000482645 EN1Q05925 392 aaPredicted RBP26.02■■□□□ 1.76
TRAPPC12-220ENST00000482645 ZBED9Q6R2W3 1325 aa26.02■■□□□ 1.76
TRAPPC12-220ENST00000482645 PALLDQ8WX93 1383 aa26.02■■□□□ 1.76
TRAPPC12-220ENST00000482645 CALD1Q05682 793 aaKnown RBP26■■□□□ 1.75
TRAPPC12-220ENST00000482645 TTC5Q8N0Z6 440 aa26■■□□□ 1.75
TRAPPC12-220ENST00000482645 NGEFQ8N5V2 710 aa26■■□□□ 1.75
TRAPPC12-220ENST00000482645 SMARCC1Q92922 1105 aaPredicted RBP26■■□□□ 1.75
TRAPPC12-220ENST00000482645 PTCD1O75127 700 aaKnown RBP25.99■■□□□ 1.75
TRAPPC12-220ENST00000482645 NCBP3Q53F19 620 aaKnown RBP25.99■■□□□ 1.75
TRAPPC12-220ENST00000482645 RBM42Q9BTD8 480 aaKnown RBP25.99■■□□□ 1.75
TRAPPC12-220ENST00000482645 TSPYL4Q9UJ04 414 aa25.99■■□□□ 1.75
TRAPPC12-220ENST00000482645 PAPPAQ13219 1627 aa25.98■■□□□ 1.75
TRAPPC12-220ENST00000482645 KCNQ3O43525 872 aa25.98■■□□□ 1.75
TRAPPC12-220ENST00000482645 ZNF790Q6PG37 636 aa25.98■■□□□ 1.75
TRAPPC12-220ENST00000482645 PLSCR1O15162 318 aa25.97■■□□□ 1.75
TRAPPC12-220ENST00000482645 EZH2Q15910 746 aaKnown RBP25.97■■□□□ 1.75
TRAPPC12-220ENST00000482645 KCNQ4P56696 695 aa25.96■■□□□ 1.75
TRAPPC12-220ENST00000482645 CFAP44Q96MT7 982 aa25.94■■□□□ 1.74
TRAPPC12-220ENST00000482645 LY75O60449 1722 aa25.94■■□□□ 1.74
TRAPPC12-220ENST00000482645 LOC102724428A0A0B4J2F2 783 aa25.93■■□□□ 1.74
TRAPPC12-220ENST00000482645 SIK1P57059 783 aa25.93■■□□□ 1.74
TRAPPC12-220ENST00000482645 TXNRD1Q16881 649 aa25.93■■□□□ 1.74
TRAPPC12-220ENST00000482645 WDR63Q8IWG1 891 aa25.93■■□□□ 1.74
TRAPPC12-220ENST00000482645 CAMKK2Q96RR4 588 aa25.93■■□□□ 1.74
TRAPPC12-220ENST00000482645 IFT57Q9NWB7 429 aa25.93■■□□□ 1.74
TRAPPC12-220ENST00000482645 CCNL1Q9UK58 526 aaPredicted RBP25.93■■□□□ 1.74
TRAPPC12-220ENST00000482645 KDM3BQ7LBC6 1761 aa25.93■■□□□ 1.74
TRAPPC12-220ENST00000482645 GNAI1P63096 354 aa25.93■■□□□ 1.74
TRAPPC12-220ENST00000482645 RGPD3A6NKT7 1758 aaPredicted RBP25.92■■□□□ 1.74
TRAPPC12-220ENST00000482645 RGPD4Q7Z3J3 1758 aa25.92■■□□□ 1.74
TRAPPC12-220ENST00000482645 KCPQ6ZWJ8 1503 aa25.92■■□□□ 1.74
TRAPPC12-220ENST00000482645 CHL1O00533 1208 aa25.92■■□□□ 1.74
TRAPPC12-220ENST00000482645 SOCS7O14512 581 aa25.92■■□□□ 1.74
TRAPPC12-220ENST00000482645 ZNF496Q96IT1 587 aaPredicted RBP25.92■■□□□ 1.74
TRAPPC12-220ENST00000482645 MBIPQ9NS73 344 aa25.92■■□□□ 1.74
TRAPPC12-220ENST00000482645 UBR2Q8IWV8 1755 aa25.91■■□□□ 1.74
TRAPPC12-220ENST00000482645 ZNF521Q96K83 1311 aa25.91■■□□□ 1.74
TRAPPC12-220ENST00000482645 ATP6V1AP38606 617 aa25.91■■□□□ 1.74
TRAPPC12-220ENST00000482645 PROM2Q8N271 834 aa25.91■■□□□ 1.74
TRAPPC12-220ENST00000482645 TSR2Q969E8 191 aaKnown RBP25.9■■□□□ 1.74
TRAPPC12-220ENST00000482645 FMNL2Q96PY5 1086 aa25.9■■□□□ 1.74
TRAPPC12-220ENST00000482645 BABAM1Q9NWV8 329 aa25.9■■□□□ 1.74
TRAPPC12-220ENST00000482645 IL16Q14005 1332 aa25.9■■□□□ 1.74
TRAPPC12-220ENST00000482645 ZNF853P0CG23 659 aa25.89■■□□□ 1.74
TRAPPC12-220ENST00000482645 SPINK5Q9NQ38 1064 aaPredicted RBP25.89■■□□□ 1.74
TRAPPC12-220ENST00000482645 GOLGA2Q08379 1002 aa25.88■■□□□ 1.73
TRAPPC12-220ENST00000482645 SLC4A9Q96Q91 983 aa25.88■■□□□ 1.73
TRAPPC12-220ENST00000482645 LRRC4BQ9NT99 713 aa25.88■■□□□ 1.73
TRAPPC12-220ENST00000482645 SLC27A3Q5K4L6 730 aa25.88■■□□□ 1.73
TRAPPC12-220ENST00000482645 EIF4A1P60842 406 aaKnown RBP25.87■■□□□ 1.73
TRAPPC12-220ENST00000482645 HEG1Q9ULI3 1381 aa25.86■■□□□ 1.73
TRAPPC12-220ENST00000482645 ITPK1Q13572 414 aa25.86■■□□□ 1.73
TRAPPC12-220ENST00000482645 CDCA7LQ96GN5 454 aa25.85■■□□□ 1.73
TRAPPC12-220ENST00000482645 RREB1Q92766 1687 aa25.85■■□□□ 1.73
TRAPPC12-220ENST00000482645 KRT24Q2M2I5 525 aa25.84■■□□□ 1.73
TRAPPC12-220ENST00000482645 MYH16Q9H6N6 1097 aa25.84■■□□□ 1.73
TRAPPC12-220ENST00000482645 FANCIQ9NVI1 1328 aa25.84■■□□□ 1.73
TRAPPC12-220ENST00000482645 PRAMEF22A3QJZ6 481 aa25.83■■□□□ 1.73
TRAPPC12-220ENST00000482645 DNAJC10Q8IXB1 793 aa25.83■■□□□ 1.73
TRAPPC12-220ENST00000482645 C5P01031 1676 aa25.83■■□□□ 1.73
TRAPPC12-220ENST00000482645 TJP1Q07157 1748 aa25.82■■□□□ 1.72
TRAPPC12-220ENST00000482645 NUP188Q5SRE5 1749 aa25.82■■□□□ 1.72
TRAPPC12-220ENST00000482645 E9PSI1 815 aa25.82■■□□□ 1.72
TRAPPC12-220ENST00000482645 SNRPA1P09661 255 aaKnown RBP25.82■■□□□ 1.72
TRAPPC12-220ENST00000482645 VSIG10Q8N0Z9 540 aa25.82■■□□□ 1.72
TRAPPC12-220ENST00000482645 LINC00116Q8NCU8 138 aa25.82■■□□□ 1.72
TRAPPC12-220ENST00000482645 TAF1LQ8IZX4 1826 aa25.81■■□□□ 1.72
TRAPPC12-220ENST00000482645 ELL2O00472 640 aaPredicted RBP25.8■■□□□ 1.72
TRAPPC12-220ENST00000482645 ZNF831Q5JPB2 1677 aa25.8■■□□□ 1.72
TRAPPC12-220ENST00000482645 GIGYF1O75420 1035 aaPredicted RBP25.79■■□□□ 1.72
TRAPPC12-220ENST00000482645 SLFN5Q08AF3 891 aa25.78■■□□□ 1.72
TRAPPC12-220ENST00000482645 CENPBP07199 599 aaPredicted RBP25.78■■□□□ 1.72
TRAPPC12-220ENST00000482645 USP16Q9Y5T5 823 aa25.78■■□□□ 1.72
TRAPPC12-220ENST00000482645 COL5A3P25940 1745 aaPredicted RBP25.78■■□□□ 1.72
TRAPPC12-220ENST00000482645 C4BP0C0L5 1744 aa25.77■■□□□ 1.72
TRAPPC12-220ENST00000482645 STARD3NLO95772 234 aa25.77■■□□□ 1.72
TRAPPC12-220ENST00000482645 C8orf58Q8NAV2 365 aa25.77■■□□□ 1.72
TRAPPC12-220ENST00000482645 TEX13AQ9BXU3 409 aaPredicted RBP25.77■■□□□ 1.72
TRAPPC12-220ENST00000482645 EIF2S2P20042 333 aaKnown RBP25.76■■□□□ 1.71
TRAPPC12-220ENST00000482645 DUSP27Q5VZP5 1158 aa25.76■■□□□ 1.71
TRAPPC12-220ENST00000482645 AK7Q96M32 723 aa25.76■■□□□ 1.71
TRAPPC12-220ENST00000482645 ANO8Q9HCE9 1232 aaPredicted RBP25.76■■□□□ 1.71
TRAPPC12-220ENST00000482645 CICQ96RK0 1608 aaPredicted RBP25.75■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms