RNA–Protein interactions for RNA: ENST00000482632.5

SPTLC1-206, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 837 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-206ENST00000482632 TOGARAM1Q9Y4F4 1720 aa13.39□□□□□ -0.27
SPTLC1-206ENST00000482632 EVX2Q03828 476 aa13.38□□□□□ -0.27
SPTLC1-206ENST00000482632 RALBP1Q15311 655 aa13.38□□□□□ -0.27
SPTLC1-206ENST00000482632 C1orf141Q5JVX7 400 aa13.38□□□□□ -0.27
SPTLC1-206ENST00000482632 IFNL2Q8IZJ0 200 aa13.38□□□□□ -0.27
SPTLC1-206ENST00000482632 ZBTB47Q9UFB7 747 aaPredicted RBP13.38□□□□□ -0.27
SPTLC1-206ENST00000482632 RGPD3A6NKT7 1758 aaPredicted RBP13.37□□□□□ -0.27
SPTLC1-206ENST00000482632 RGPD4Q7Z3J3 1758 aa13.37□□□□□ -0.27
SPTLC1-206ENST00000482632 U2AF1L5P0DN76 240 aaPredicted RBP13.37□□□□□ -0.27
SPTLC1-206ENST00000482632 U2AF1Q01081 240 aaKnown RBP eCLIP13.37□□□□□ -0.27
SPTLC1-206ENST00000482632 CAMKK2Q96RR4 588 aa13.37□□□□□ -0.27
SPTLC1-206ENST00000482632 PHKG2P15735 406 aa13.36□□□□□ -0.27
SPTLC1-206ENST00000482632 AMOTQ4VCS5 1084 aa13.36□□□□□ -0.27
SPTLC1-206ENST00000482632 MPRIPQ6WCQ1 1025 aa13.36□□□□□ -0.27
SPTLC1-206ENST00000482632 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.36□□□□□ -0.272e-12■■■□□ 18.4
SPTLC1-206ENST00000482632 KDRP35968 1356 aa13.35□□□□□ -0.27
SPTLC1-206ENST00000482632 PRR29P0C7W0 189 aa13.35□□□□□ -0.27
SPTLC1-206ENST00000482632 MYBBP1AQ9BQG0 1328 aaKnown RBP13.35□□□□□ -0.27
SPTLC1-206ENST00000482632 PLSCR1O15162 318 aa13.34□□□□□ -0.27
SPTLC1-206ENST00000482632 SCN11AQ9UI33 1791 aa13.33□□□□□ -0.28
SPTLC1-206ENST00000482632 HSP90AB1P08238 724 aaKnown RBP13.33□□□□□ -0.28
SPTLC1-206ENST00000482632 YY1P25490 414 aa13.33□□□□□ -0.28
SPTLC1-206ENST00000482632 PRKAR2BP31323 418 aa13.33□□□□□ -0.28
SPTLC1-206ENST00000482632 R3HDM1Q15032 1099 aaKnown RBP13.33□□□□□ -0.28
SPTLC1-206ENST00000482632 TXNRD1Q16881 649 aa13.33□□□□□ -0.28
SPTLC1-206ENST00000482632 NBPF14Q5TI25 921 aa13.33□□□□□ -0.28
SPTLC1-206ENST00000482632 TMOD3Q9NYL9 352 aa13.33□□□□□ -0.28
SPTLC1-206ENST00000482632 NEFMP07197 916 aa13.32□□□□□ -0.28
SPTLC1-206ENST00000482632 PLEKHG2Q9H7P9 1386 aa13.32□□□□□ -0.28
SPTLC1-206ENST00000482632 LY75O60449 1722 aa13.31□□□□□ -0.28
SPTLC1-206ENST00000482632 DCAF5Q96JK2 942 aa13.31□□□□□ -0.28
SPTLC1-206ENST00000482632 PRKRIP1Q9H875 184 aaPredicted RBP13.31□□□□□ -0.28
SPTLC1-206ENST00000482632 KCNQ4P56696 695 aa13.3□□□□□ -0.28
SPTLC1-206ENST00000482632 CABP4P57796 275 aa13.3□□□□□ -0.28
SPTLC1-206ENST00000482632 NKX1-1Q15270 411 aaPredicted RBP13.3□□□□□ -0.28
SPTLC1-206ENST00000482632 MTHFSDQ2M296 383 aaKnown RBP13.3□□□□□ -0.28
SPTLC1-206ENST00000482632 AKAP4Q5JQC9 854 aa13.3□□□□□ -0.28
SPTLC1-206ENST00000482632 C19orf67A6NJJ6 358 aa13.29□□□□□ -0.28
SPTLC1-206ENST00000482632 ANP32CO43423 234 aa13.29□□□□□ -0.28
SPTLC1-206ENST00000482632 WDR43Q15061 677 aaKnown RBP eCLIP13.29□□□□□ -0.28
SPTLC1-206ENST00000482632 GAS2L2Q8NHY3 880 aa13.29□□□□□ -0.28
SPTLC1-206ENST00000482632 PIGBQ92521 554 aa13.29□□□□□ -0.28
SPTLC1-206ENST00000482632 RSPH6AQ9H0K4 717 aa13.29□□□□□ -0.28
SPTLC1-206ENST00000482632 STK32BQ9NY57 414 aa13.29□□□□□ -0.28
SPTLC1-206ENST00000482632 CCNL1Q9UK58 526 aaPredicted RBP13.29□□□□□ -0.28
SPTLC1-206ENST00000482632 PALLDQ8WX93 1383 aa13.29□□□□□ -0.28
SPTLC1-206ENST00000482632 KDM6AO15550 1401 aaPredicted RBP13.29□□□□□ -0.28
SPTLC1-206ENST00000482632 DLG5Q8TDM6 1919 aa13.29□□□□□ -0.28
SPTLC1-206ENST00000482632 SMARCC1Q92922 1105 aaPredicted RBP13.28□□□□□ -0.28
SPTLC1-206ENST00000482632 C5P01031 1676 aa13.28□□□□□ -0.28
SPTLC1-206ENST00000482632 ERVV-2B6SEH9 535 aa13.27□□□□□ -0.29
SPTLC1-206ENST00000482632 FCHSD2O94868 740 aa13.27□□□□□ -0.29
SPTLC1-206ENST00000482632 CHADLQ6NUI6 762 aa13.27□□□□□ -0.29
SPTLC1-206ENST00000482632 PHACTR3Q96KR7 559 aa13.27□□□□□ -0.29
SPTLC1-206ENST00000482632 ANO8Q9HCE9 1232 aaPredicted RBP13.27□□□□□ -0.29
SPTLC1-206ENST00000482632 MAPK8IP3Q9UPT6 1336 aa13.27□□□□□ -0.29
SPTLC1-206ENST00000482632 MAP3K5Q99683 1374 aa13.27□□□□□ -0.29
SPTLC1-206ENST00000482632 TAF1LQ8IZX4 1826 aa13.27□□□□□ -0.29
SPTLC1-206ENST00000482632 RNMTO43148 476 aaKnown RBP13.26□□□□□ -0.29
SPTLC1-206ENST00000482632 LGR6Q9HBX8 967 aa13.26□□□□□ -0.29
SPTLC1-206ENST00000482632 ASAP1Q9ULH1 1129 aa13.26□□□□□ -0.29
SPTLC1-206ENST00000482632 TUBGCP6Q96RT7 1819 aa13.25□□□□□ -0.29
SPTLC1-206ENST00000482632 GNAT3A8MTJ3 354 aa13.25□□□□□ -0.29
SPTLC1-206ENST00000482632 SLC27A3Q5K4L6 730 aa13.25□□□□□ -0.29
SPTLC1-206ENST00000482632 NFATC2IPQ8NCF5 419 aa13.25□□□□□ -0.29
SPTLC1-206ENST00000482632 RTF1Q92541 710 aaKnown RBP13.25□□□□□ -0.29
SPTLC1-206ENST00000482632 PNNQ9H307 717 aaKnown RBP13.25□□□□□ -0.29
SPTLC1-206ENST00000482632 LRRC4BQ9NT99 713 aa13.25□□□□□ -0.29
SPTLC1-206ENST00000482632 TEFQ10587 303 aa13.24□□□□□ -0.29
SPTLC1-206ENST00000482632 CREBZFQ9NS37 354 aa13.24□□□□□ -0.29
SPTLC1-206ENST00000482632 PAPPAQ13219 1627 aa13.24□□□□□ -0.29
SPTLC1-206ENST00000482632 UTRNP46939 3433 aa13.23□□□□□ -0.29
SPTLC1-206ENST00000482632 PTCD1O75127 700 aaKnown RBP13.23□□□□□ -0.29
SPTLC1-206ENST00000482632 SLC15A2Q16348 729 aa13.23□□□□□ -0.29
SPTLC1-206ENST00000482632 CCDC146Q8IYE0 955 aa13.23□□□□□ -0.29
SPTLC1-206ENST00000482632 SLC52A2Q9HAB3 445 aa13.23□□□□□ -0.29
SPTLC1-206ENST00000482632 ATG3Q9NT62 314 aa13.23□□□□□ -0.29
SPTLC1-206ENST00000482632 TFCP2L1Q9NZI6 479 aa13.23□□□□□ -0.29
SPTLC1-206ENST00000482632 LOC102724428A0A0B4J2F2 783 aa13.22□□□□□ -0.29
SPTLC1-206ENST00000482632 ATP6V1AP38606 617 aa13.22□□□□□ -0.29
SPTLC1-206ENST00000482632 SIK1P57059 783 aa13.22□□□□□ -0.29
SPTLC1-206ENST00000482632 ZNF827Q17R98 1081 aa13.22□□□□□ -0.29
SPTLC1-206ENST00000482632 IFFO2Q5TF58 517 aa13.22□□□□□ -0.29
SPTLC1-206ENST00000482632 SLC39A6Q13433 755 aa13.21□□□□□ -0.29
SPTLC1-206ENST00000482632 MCM10Q7L590 875 aa13.21□□□□□ -0.29
SPTLC1-206ENST00000482632 AK7Q96M32 723 aa13.21□□□□□ -0.29
SPTLC1-206ENST00000482632 SIPA1L3O60292 1781 aaPredicted RBP13.21□□□□□ -0.29
SPTLC1-206ENST00000482632 C4BP0C0L5 1744 aa13.21□□□□□ -0.3
SPTLC1-206ENST00000482632 ADAMTS7Q9UKP4 1686 aa13.21□□□□□ -0.3
SPTLC1-206ENST00000482632 DCTN1Q14203 1278 aa13.2□□□□□ -0.3
SPTLC1-206ENST00000482632 TTC5Q8N0Z6 440 aa13.2□□□□□ -0.3
SPTLC1-206ENST00000482632 MRS2Q9HD23 443 aa13.2□□□□□ -0.3
SPTLC1-206ENST00000482632 MRC1P22897 1456 aa13.2□□□□□ -0.3
SPTLC1-206ENST00000482632 CASZ1Q86V15 1759 aa13.2□□□□□ -0.3
SPTLC1-206ENST00000482632 QSER1Q2KHR3 1735 aa13.19□□□□□ -0.3
SPTLC1-206ENST00000482632 PHF14O94880 888 aa13.19□□□□□ -0.3
SPTLC1-206ENST00000482632 NEUROD2Q15784 382 aa13.19□□□□□ -0.3
SPTLC1-206ENST00000482632 NFE2L2Q16236 605 aa13.19□□□□□ -0.3
SPTLC1-206ENST00000482632 IL17REQ8NFR9 667 aa13.19□□□□□ -0.3
SPTLC1-206ENST00000482632 ZBTB7AO95365 584 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms