RNA–Protein interactions for RNA: ENST00000482507.5

ATG4B-220, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4B, Length 2,414 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-220ENST00000482507 CEP85Q6P2H3 762 aa18.45■□□□□ 0.54
ATG4B-220ENST00000482507 KIF1AQ12756 1690 aa18.45■□□□□ 0.54
ATG4B-220ENST00000482507 MEIS3Q99687 375 aa18.44■□□□□ 0.54
ATG4B-220ENST00000482507 MIS18AQ9NYP9 233 aa18.44■□□□□ 0.54
ATG4B-220ENST00000482507 CRB1P82279 1406 aa18.44■□□□□ 0.54
ATG4B-220ENST00000482507 RGPD1P0DJD0 1748 aa18.44■□□□□ 0.54
ATG4B-220ENST00000482507 RTL1A6NKG5 1358 aa18.43■□□□□ 0.54
ATG4B-220ENST00000482507 SMARCA5O60264 1052 aaPredicted RBP18.43■□□□□ 0.54
ATG4B-220ENST00000482507 TOM1O60784 492 aa18.43■□□□□ 0.54
ATG4B-220ENST00000482507 SBNO1A3KN83 1393 aa18.43■□□□□ 0.54
ATG4B-220ENST00000482507 KIAA0232Q92628 1395 aa18.43■□□□□ 0.54
ATG4B-220ENST00000482507 HOXC9P31274 260 aa18.43■□□□□ 0.54
ATG4B-220ENST00000482507 KCNH5Q8NCM2 988 aa18.43■□□□□ 0.54
ATG4B-220ENST00000482507 TNS3Q68CZ2 1445 aa18.42■□□□□ 0.54
ATG4B-220ENST00000482507 TRPM3Q9HCF6 1732 aaPredicted RBP18.41■□□□□ 0.54
ATG4B-220ENST00000482507 AXIN2Q9Y2T1 843 aa18.41■□□□□ 0.54
ATG4B-220ENST00000482507 APBB1O00213 710 aa18.41■□□□□ 0.54
ATG4B-220ENST00000482507 CHRNA2Q15822 529 aa18.41■□□□□ 0.54
ATG4B-220ENST00000482507 RPAP2Q8IXW5 612 aaPredicted RBP18.41■□□□□ 0.54
ATG4B-220ENST00000482507 SSFA2P28290 1259 aa18.4■□□□□ 0.54
ATG4B-220ENST00000482507 ARHGEF25Q86VW2 580 aa18.4■□□□□ 0.54
ATG4B-220ENST00000482507 MARF1Q9Y4F3 1742 aaKnown RBP18.4■□□□□ 0.54
ATG4B-220ENST00000482507 HSP90AA1P07900 732 aaKnown RBP18.4■□□□□ 0.54
ATG4B-220ENST00000482507 G2E3Q7L622 706 aa18.4■□□□□ 0.54
ATG4B-220ENST00000482507 CERKQ8TCT0 537 aa18.4■□□□□ 0.54
ATG4B-220ENST00000482507 USP26Q9BXU7 913 aa18.4■□□□□ 0.54
ATG4B-220ENST00000482507 SLC4A2P04920 1241 aa18.39■□□□□ 0.53
ATG4B-220ENST00000482507 GAS2L3Q86XJ1 694 aa18.39■□□□□ 0.53
ATG4B-220ENST00000482507 PTPRCP08575 1304 aa18.39■□□□□ 0.53
ATG4B-220ENST00000482507 FLT4P35916 1363 aa18.39■□□□□ 0.53
ATG4B-220ENST00000482507 SDSP20132 328 aa18.39■□□□□ 0.53
ATG4B-220ENST00000482507 MRE11P49959 708 aa18.38■□□□□ 0.53
ATG4B-220ENST00000482507 MTHFSDQ2M296 383 aaKnown RBP18.38■□□□□ 0.53
ATG4B-220ENST00000482507 GBP4Q96PP9 640 aa18.38■□□□□ 0.53
ATG4B-220ENST00000482507 HAP1P54257 671 aaPredicted RBP18.38■□□□□ 0.53
ATG4B-220ENST00000482507 IP6K1Q92551 441 aa18.38■□□□□ 0.53
ATG4B-220ENST00000482507 GRPEL1Q9HAV7 217 aa18.38■□□□□ 0.53
ATG4B-220ENST00000482507 F6X3S4 739 aa18.37■□□□□ 0.53
ATG4B-220ENST00000482507 USHBP1Q8N6Y0 703 aa18.37■□□□□ 0.53
ATG4B-220ENST00000482507 MED1Q15648 1581 aaPredicted RBP18.37■□□□□ 0.53
ATG4B-220ENST00000482507 EYA1Q99502 592 aa18.37■□□□□ 0.53
ATG4B-220ENST00000482507 ROBO1Q9Y6N7 1651 aa18.36■□□□□ 0.53
ATG4B-220ENST00000482507 ARHGEF10O15013 1369 aa18.36■□□□□ 0.53
ATG4B-220ENST00000482507 NFAT5O94916 1531 aa18.36■□□□□ 0.53
ATG4B-220ENST00000482507 RABEP1Q15276 862 aa18.35■□□□□ 0.53
ATG4B-220ENST00000482507 LRRC59Q96AG4 307 aaKnown RBP18.35■□□□□ 0.53
ATG4B-220ENST00000482507 ALS2Q96Q42 1657 aa18.35■□□□□ 0.53
ATG4B-220ENST00000482507 SLC4A10Q6U841 1118 aa18.33■□□□□ 0.53
ATG4B-220ENST00000482507 TSPYL4Q9UJ04 414 aa18.33■□□□□ 0.53
ATG4B-220ENST00000482507 NBPF6Q5VWK0 638 aa18.32■□□□□ 0.52
ATG4B-220ENST00000482507 CLEC17AQ6ZS10 378 aa18.32■□□□□ 0.52
ATG4B-220ENST00000482507 NBPF4Q96M43 638 aa18.32■□□□□ 0.52
ATG4B-220ENST00000482507 SLIT3O75094 1523 aa18.32■□□□□ 0.52
ATG4B-220ENST00000482507 BAG4O95429 457 aaKnown RBP18.31■□□□□ 0.52
ATG4B-220ENST00000482507 PKP1Q13835 747 aa18.31■□□□□ 0.52
ATG4B-220ENST00000482507 ANKRD24Q8TF21 1146 aa18.31■□□□□ 0.52
ATG4B-220ENST00000482507 KDRP35968 1356 aa18.31■□□□□ 0.52
ATG4B-220ENST00000482507 AK9Q5TCS8 1911 aa18.31■□□□□ 0.52
ATG4B-220ENST00000482507 SKOR2Q2VWA4 1001 aaPredicted RBP18.3■□□□□ 0.52
ATG4B-220ENST00000482507 PRDM11Q9NQV5 511 aa18.3■□□□□ 0.52
ATG4B-220ENST00000482507 TSHZ3Q63HK5 1081 aa18.29■□□□□ 0.52
ATG4B-220ENST00000482507 RTF1Q92541 710 aaKnown RBP18.29■□□□□ 0.52
ATG4B-220ENST00000482507 ISY1Q9ULR0 285 aaKnown RBP18.29■□□□□ 0.52
ATG4B-220ENST00000482507 IGSF1Q8N6C5 1336 aa18.29■□□□□ 0.52
ATG4B-220ENST00000482507 CYP2E1P05181 493 aaPredicted RBP18.29■□□□□ 0.52
ATG4B-220ENST00000482507 PDE1AP54750 535 aa18.29■□□□□ 0.52
ATG4B-220ENST00000482507 USP54Q70EL1 1684 aa18.28■□□□□ 0.52
ATG4B-220ENST00000482507 NUTM2BA6NNL0 878 aaPredicted RBP18.28■□□□□ 0.52
ATG4B-220ENST00000482507 NUTM2EB1AL46 878 aaPredicted RBP18.28■□□□□ 0.52
ATG4B-220ENST00000482507 NUTM2AQ8IVF1 878 aaPredicted RBP18.28■□□□□ 0.52
ATG4B-220ENST00000482507 EXOC6BQ9Y2D4 811 aa18.28■□□□□ 0.52
ATG4B-220ENST00000482507 CCT4P50991 539 aaKnown RBP18.28■□□□□ 0.52
ATG4B-220ENST00000482507 ZGPATQ8N5A5 531 aaKnown RBP18.28■□□□□ 0.52
ATG4B-220ENST00000482507 NHSL1Q5SYE7 1610 aa18.28■□□□□ 0.52
ATG4B-220ENST00000482507 OSBPL3Q9H4L5 887 aa18.27■□□□□ 0.52
ATG4B-220ENST00000482507 HMMRO75330 724 aa18.27■□□□□ 0.51
ATG4B-220ENST00000482507 ADAMTS2O95450 1211 aa18.27■□□□□ 0.51
ATG4B-220ENST00000482507 ERBB4Q15303 1308 aa18.26■□□□□ 0.51
ATG4B-220ENST00000482507 SALL3Q9BXA9 1300 aa18.26■□□□□ 0.51
ATG4B-220ENST00000482507 LTN1O94822 1766 aa18.26■□□□□ 0.51
ATG4B-220ENST00000482507 EIF5BO60841 1220 aaKnown RBP18.26■□□□□ 0.51
ATG4B-220ENST00000482507 CSB-PGBD3P0DP91 1061 aa18.26■□□□□ 0.51
ATG4B-220ENST00000482507 NECTIN2Q92692 538 aa18.26■□□□□ 0.51
ATG4B-220ENST00000482507 PTMSP20962 102 aa18.25■□□□□ 0.51
ATG4B-220ENST00000482507 CASC1Q6TDU7 716 aa18.25■□□□□ 0.51
ATG4B-220ENST00000482507 NLRP2Q9NX02 1062 aa18.25■□□□□ 0.51
ATG4B-220ENST00000482507 PNMA6EA0A0J9YXQ4 647 aa18.25■□□□□ 0.51
ATG4B-220ENST00000482507 ERC2O15083 957 aa18.25■□□□□ 0.51
ATG4B-220ENST00000482507 GNAI2P04899 355 aa18.25■□□□□ 0.51
ATG4B-220ENST00000482507 KLHL40Q2TBA0 621 aa18.24■□□□□ 0.51
ATG4B-220ENST00000482507 ERBB3P21860 1342 aa18.24■□□□□ 0.51
ATG4B-220ENST00000482507 CLCN1P35523 988 aa18.24■□□□□ 0.51
ATG4B-220ENST00000482507 FLIIQ13045 1269 aa18.24■□□□□ 0.51
ATG4B-220ENST00000482507 MCTP1Q6DN14 999 aa18.24■□□□□ 0.51
ATG4B-220ENST00000482507 STRN4Q9NRL3 753 aa18.24■□□□□ 0.51
ATG4B-220ENST00000482507 ZDHHC9Q9Y397 364 aa18.24■□□□□ 0.51
ATG4B-220ENST00000482507 DDX49Q9Y6V7 483 aaKnown RBP18.24■□□□□ 0.51
ATG4B-220ENST00000482507 LRRC37A3O60309 1634 aa18.24■□□□□ 0.51
ATG4B-220ENST00000482507 REC8O95072 547 aa18.23■□□□□ 0.51
ATG4B-220ENST00000482507 GOLGA6L22H0YM25 854 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms