RNA–Protein interactions for RNA: ENST00000482444.5

SMTN-217, Transcript of smoothelin, humanhuman

TSL 4

Gene SMTN, Length 589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-217ENST00000482444 CEMIPQ8WUJ3 1361 aa23.4■■□□□ 1.34
SMTN-217ENST00000482444 MCM10Q7L590 875 aa23.39■■□□□ 1.33
SMTN-217ENST00000482444 MRC1P22897 1456 aa23.38■■□□□ 1.33
SMTN-217ENST00000482444 SMARCC1Q92922 1105 aaPredicted RBP23.38■■□□□ 1.33
SMTN-217ENST00000482444 CAMKK2Q96RR4 588 aa23.38■■□□□ 1.33
SMTN-217ENST00000482444 DCTN1Q14203 1278 aa23.37■■□□□ 1.33
SMTN-217ENST00000482444 RGPD3A6NKT7 1758 aaPredicted RBP23.37■■□□□ 1.33
SMTN-217ENST00000482444 RGPD4Q7Z3J3 1758 aa23.37■■□□□ 1.33
SMTN-217ENST00000482444 EZH2Q15910 746 aaKnown RBP23.36■■□□□ 1.33
SMTN-217ENST00000482444 ATG3Q9NT62 314 aa23.35■■□□□ 1.33
SMTN-217ENST00000482444 ASAP1Q9ULH1 1129 aa23.35■■□□□ 1.33
SMTN-217ENST00000482444 PALLDQ8WX93 1383 aa23.33■■□□□ 1.33
SMTN-217ENST00000482444 NCBP3Q53F19 620 aaKnown RBP23.33■■□□□ 1.33
SMTN-217ENST00000482444 TRIM35Q9UPQ4 493 aa23.33■■□□□ 1.33
SMTN-217ENST00000482444 SIPA1L3O60292 1781 aaPredicted RBP23.32■■□□□ 1.32
SMTN-217ENST00000482444 TXNRD1Q16881 649 aa23.32■■□□□ 1.32
SMTN-217ENST00000482444 LY75O60449 1722 aa23.31■■□□□ 1.32
SMTN-217ENST00000482444 TAF7Q15545 349 aaPredicted RBP23.31■■□□□ 1.32
SMTN-217ENST00000482444 SLC27A3Q5K4L6 730 aa23.31■■□□□ 1.32
SMTN-217ENST00000482444 PROM2Q8N271 834 aa23.31■■□□□ 1.32
SMTN-217ENST00000482444 THUMPD2Q9BTF0 503 aaKnown RBP23.31■■□□□ 1.32
SMTN-217ENST00000482444 BTBD11A6QL63 1104 aa23.3■■□□□ 1.32
SMTN-217ENST00000482444 CCDC27Q2M243 656 aa23.29■■□□□ 1.32
SMTN-217ENST00000482444 NGEFQ8N5V2 710 aa23.29■■□□□ 1.32
SMTN-217ENST00000482444 HMGB2P26583 209 aaKnown RBP23.28■■□□□ 1.32
SMTN-217ENST00000482444 SLC39A6Q13433 755 aa23.28■■□□□ 1.32
SMTN-217ENST00000482444 TTC5Q8N0Z6 440 aa23.28■■□□□ 1.32
SMTN-217ENST00000482444 CCNL1Q9UK58 526 aaPredicted RBP23.28■■□□□ 1.32
SMTN-217ENST00000482444 RREB1Q92766 1687 aa23.28■■□□□ 1.32
SMTN-217ENST00000482444 LOC102724428A0A0B4J2F2 783 aa23.27■■□□□ 1.32
SMTN-217ENST00000482444 SIK1P57059 783 aa23.27■■□□□ 1.32
SMTN-217ENST00000482444 ZNF790Q6PG37 636 aa23.27■■□□□ 1.32
SMTN-217ENST00000482444 RBM42Q9BTD8 480 aaKnown RBP23.27■■□□□ 1.32
SMTN-217ENST00000482444 PAPPAQ13219 1627 aa23.26■■□□□ 1.31
SMTN-217ENST00000482444 CALD1Q05682 793 aaKnown RBP23.26■■□□□ 1.31
SMTN-217ENST00000482444 SENP3-EIF4A1A0A087X0R7 540 aa23.25■■□□□ 1.31
SMTN-217ENST00000482444 PTCD1O75127 700 aaKnown RBP23.25■■□□□ 1.31
SMTN-217ENST00000482444 LRRC4BQ9NT99 713 aa23.25■■□□□ 1.31
SMTN-217ENST00000482444 BABAM1Q9NWV8 329 aa23.25■■□□□ 1.31
SMTN-217ENST00000482444 ATP6V1AP38606 617 aa23.24■■□□□ 1.31
SMTN-217ENST00000482444 WWC1Q8IX03 1113 aa23.24■■□□□ 1.31
SMTN-217ENST00000482444 SALL2Q9Y467 1007 aaPredicted RBP23.24■■□□□ 1.31
SMTN-217ENST00000482444 MIS18AQ9NYP9 233 aa23.23■■□□□ 1.31
SMTN-217ENST00000482444 NUP188Q5SRE5 1749 aa23.22■■□□□ 1.31
SMTN-217ENST00000482444 KCNQ4P56696 695 aa23.22■■□□□ 1.31
SMTN-217ENST00000482444 ZNF831Q5JPB2 1677 aa23.22■■□□□ 1.31
SMTN-217ENST00000482444 UBR2Q8IWV8 1755 aa23.22■■□□□ 1.31
SMTN-217ENST00000482444 NBPF14Q5TI25 921 aa23.21■■□□□ 1.31
SMTN-217ENST00000482444 VSIG10Q8N0Z9 540 aa23.21■■□□□ 1.31
SMTN-217ENST00000482444 FMNL2Q96PY5 1086 aa23.21■■□□□ 1.31
SMTN-217ENST00000482444 TSPYL4Q9UJ04 414 aa23.21■■□□□ 1.31
SMTN-217ENST00000482444 KCPQ6ZWJ8 1503 aa23.2■■□□□ 1.3
SMTN-217ENST00000482444 KCNQ3O43525 872 aa23.2■■□□□ 1.3
SMTN-217ENST00000482444 ZNF496Q96IT1 587 aaPredicted RBP23.2■■□□□ 1.3
SMTN-217ENST00000482444 CFAP44Q96MT7 982 aa23.2■■□□□ 1.3
SMTN-217ENST00000482444 SLC4A9Q96Q91 983 aa23.2■■□□□ 1.3
SMTN-217ENST00000482444 LAS1LQ9Y4W2 734 aaKnown RBP23.2■■□□□ 1.3
SMTN-217ENST00000482444 KDM3BQ7LBC6 1761 aa23.19■■□□□ 1.3
SMTN-217ENST00000482444 CHL1O00533 1208 aa23.19■■□□□ 1.3
SMTN-217ENST00000482444 TAF1LQ8IZX4 1826 aa23.18■■□□□ 1.3
SMTN-217ENST00000482444 GNAI1P63096 354 aa23.18■■□□□ 1.3
SMTN-217ENST00000482444 ITPK1Q13572 414 aa23.18■■□□□ 1.3
SMTN-217ENST00000482444 WDR63Q8IWG1 891 aa23.18■■□□□ 1.3
SMTN-217ENST00000482444 IFT57Q9NWB7 429 aa23.18■■□□□ 1.3
SMTN-217ENST00000482444 HEG1Q9ULI3 1381 aa23.17■■□□□ 1.3
SMTN-217ENST00000482444 C5P01031 1676 aa23.17■■□□□ 1.3
SMTN-217ENST00000482444 IL16Q14005 1332 aa23.16■■□□□ 1.3
SMTN-217ENST00000482444 ZNF853P0CG23 659 aa23.16■■□□□ 1.3
SMTN-217ENST00000482444 TEX13AQ9BXU3 409 aaPredicted RBP23.16■■□□□ 1.3
SMTN-217ENST00000482444 STK32BQ9NY57 414 aa23.16■■□□□ 1.3
SMTN-217ENST00000482444 EIF4A1P60842 406 aaKnown RBP23.15■■□□□ 1.3
SMTN-217ENST00000482444 LINC00116Q8NCU8 138 aa23.15■■□□□ 1.3
SMTN-217ENST00000482444 CICQ96RK0 1608 aaPredicted RBP23.15■■□□□ 1.3
SMTN-217ENST00000482444 SNRPA1P09661 255 aaKnown RBP23.14■■□□□ 1.29
SMTN-217ENST00000482444 SLC15A2Q16348 729 aa23.14■■□□□ 1.29
SMTN-217ENST00000482444 TJP1Q07157 1748 aa23.13■■□□□ 1.29
SMTN-217ENST00000482444 DNAJC10Q8IXB1 793 aa23.13■■□□□ 1.29
SMTN-217ENST00000482444 AKT1S1Q96B36 256 aa23.13■■□□□ 1.29
SMTN-217ENST00000482444 C4BP0C0L5 1744 aa23.12■■□□□ 1.29
SMTN-217ENST00000482444 COL5A3P25940 1745 aaPredicted RBP23.12■■□□□ 1.29
SMTN-217ENST00000482444 ANO8Q9HCE9 1232 aaPredicted RBP23.12■■□□□ 1.29
SMTN-217ENST00000482444 MBIPQ9NS73 344 aa23.12■■□□□ 1.29
SMTN-217ENST00000482444 ZNF521Q96K83 1311 aa23.11■■□□□ 1.29
SMTN-217ENST00000482444 STARD3NLO95772 234 aa23.11■■□□□ 1.29
SMTN-217ENST00000482444 RC3H1Q5TC82 1133 aaKnown RBP23.11■■□□□ 1.29
SMTN-217ENST00000482444 AK7Q96M32 723 aa23.11■■□□□ 1.29
SMTN-217ENST00000482444 CYP19A1P11511 503 aaPredicted RBP23.1■■□□□ 1.29
SMTN-217ENST00000482444 ZNF827Q17R98 1081 aa23.1■■□□□ 1.29
SMTN-217ENST00000482444 TFCP2L1Q9NZI6 479 aa23.1■■□□□ 1.29
SMTN-217ENST00000482444 CNTNAP4Q9C0A0 1308 aa23.09■■□□□ 1.29
SMTN-217ENST00000482444 GIGYF1O75420 1035 aaPredicted RBP23.09■■□□□ 1.29
SMTN-217ENST00000482444 CRKLP46109 303 aaKnown RBP23.08■■□□□ 1.29
SMTN-217ENST00000482444 HNRNPUQ00839 825 aaKnown RBP eCLIP23.08■■□□□ 1.29
SMTN-217ENST00000482444 R3HDM1Q15032 1099 aaKnown RBP23.08■■□□□ 1.29
SMTN-217ENST00000482444 GOLGA2Q08379 1002 aa23.07■■□□□ 1.28
SMTN-217ENST00000482444 USP16Q9Y5T5 823 aa23.07■■□□□ 1.28
SMTN-217ENST00000482444 PRAMEF22A3QJZ6 481 aa23.06■■□□□ 1.28
SMTN-217ENST00000482444 MYH16Q9H6N6 1097 aa23.06■■□□□ 1.28
SMTN-217ENST00000482444 CCDC87Q9NVE4 849 aa23.06■■□□□ 1.28
SMTN-217ENST00000482444 MYH14Q7Z406 1995 aaKnown RBP23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms