RNA–Protein interactions for RNA: ENST00000482310.5

HDAC1-208, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-208ENST00000482310 TEFQ10587 303 aa17.36■□□□□ 0.37
HDAC1-208ENST00000482310 NFATC2IPQ8NCF5 419 aa17.35■□□□□ 0.37
HDAC1-208ENST00000482310 LAS1LQ9Y4W2 734 aaKnown RBP17.35■□□□□ 0.37
HDAC1-208ENST00000482310 LRP5O75197 1615 aa17.35■□□□□ 0.37
HDAC1-208ENST00000482310 PSDA5PKW4 1024 aaPredicted RBP17.34■□□□□ 0.37
HDAC1-208ENST00000482310 BCL9O00512 1426 aa17.34■□□□□ 0.37
HDAC1-208ENST00000482310 LY75O60449 1722 aa17.34■□□□□ 0.37
HDAC1-208ENST00000482310 UBR2Q8IWV8 1755 aa17.34■□□□□ 0.37
HDAC1-208ENST00000482310 SLC52A2Q9HAB3 445 aa17.34■□□□□ 0.37
HDAC1-208ENST00000482310 CEMIPQ8WUJ3 1361 aa17.33■□□□□ 0.36
HDAC1-208ENST00000482310 ERVV-2B6SEH9 535 aa17.33■□□□□ 0.36
HDAC1-208ENST00000482310 HTATSF1O43719 755 aaKnown RBP17.33■□□□□ 0.36
HDAC1-208ENST00000482310 PIGBQ92521 554 aa17.33■□□□□ 0.36
HDAC1-208ENST00000482310 MIS18AQ9NYP9 233 aa17.33■□□□□ 0.36
HDAC1-208ENST00000482310 SLC39A6Q13433 755 aa17.32■□□□□ 0.36
HDAC1-208ENST00000482310 EN1Q05925 392 aaPredicted RBP17.31■□□□□ 0.36
HDAC1-208ENST00000482310 SF3B2Q13435 895 aaKnown RBP17.31■□□□□ 0.36
HDAC1-208ENST00000482310 WWC1Q8IX03 1113 aa17.31■□□□□ 0.36
HDAC1-208ENST00000482310 BCL11BQ9C0K0 894 aaPredicted RBP17.31■□□□□ 0.36
HDAC1-208ENST00000482310 C5P01031 1676 aa17.31■□□□□ 0.36
HDAC1-208ENST00000482310 BTBD11A6QL63 1104 aa17.3■□□□□ 0.36
HDAC1-208ENST00000482310 APBA3O96018 575 aa17.3■□□□□ 0.36
HDAC1-208ENST00000482310 ASAP1Q9ULH1 1129 aa17.3■□□□□ 0.36
HDAC1-208ENST00000482310 TAF1LQ8IZX4 1826 aa17.3■□□□□ 0.36
HDAC1-208ENST00000482310 RGPD3A6NKT7 1758 aaPredicted RBP17.29■□□□□ 0.36
HDAC1-208ENST00000482310 RGPD4Q7Z3J3 1758 aa17.29■□□□□ 0.36
HDAC1-208ENST00000482310 KCNQ3O43525 872 aa17.28■□□□□ 0.36
HDAC1-208ENST00000482310 TSPYL4Q9UJ04 414 aa17.28■□□□□ 0.36
HDAC1-208ENST00000482310 TJP1Q07157 1748 aa17.27■□□□□ 0.36
HDAC1-208ENST00000482310 BAG6P46379 1132 aa17.27■□□□□ 0.36
HDAC1-208ENST00000482310 TAF7Q15545 349 aaPredicted RBP17.27■□□□□ 0.36
HDAC1-208ENST00000482310 CCDC27Q2M243 656 aa17.27■□□□□ 0.36
HDAC1-208ENST00000482310 RBM42Q9BTD8 480 aaKnown RBP17.27■□□□□ 0.36
HDAC1-208ENST00000482310 ATG3Q9NT62 314 aa17.27■□□□□ 0.36
HDAC1-208ENST00000482310 PALLDQ8WX93 1383 aa17.27■□□□□ 0.35
HDAC1-208ENST00000482310 KCPQ6ZWJ8 1503 aa17.26■□□□□ 0.35
HDAC1-208ENST00000482310 RREB1Q92766 1687 aa17.26■□□□□ 0.35
HDAC1-208ENST00000482310 LAMB4A4D0S4 1761 aa17.26■□□□□ 0.35
HDAC1-208ENST00000482310 PTCD1O75127 700 aaKnown RBP17.26■□□□□ 0.35
HDAC1-208ENST00000482310 KCNQ4P56696 695 aa17.26■□□□□ 0.35
HDAC1-208ENST00000482310 TTC5Q8N0Z6 440 aa17.26■□□□□ 0.35
HDAC1-208ENST00000482310 NUP188Q5SRE5 1749 aa17.26■□□□□ 0.35
HDAC1-208ENST00000482310 CALD1Q05682 793 aaKnown RBP17.25■□□□□ 0.35
HDAC1-208ENST00000482310 TSR2Q969E8 191 aaKnown RBP17.25■□□□□ 0.35
HDAC1-208ENST00000482310 COL5A3P25940 1745 aaPredicted RBP17.24■□□□□ 0.35
HDAC1-208ENST00000482310 EZH2Q15910 746 aaKnown RBP17.23■□□□□ 0.35
HDAC1-208ENST00000482310 ZNF790Q6PG37 636 aa17.23■□□□□ 0.35
HDAC1-208ENST00000482310 SPINK5Q9NQ38 1064 aaPredicted RBP17.23■□□□□ 0.35
HDAC1-208ENST00000482310 MBIPQ9NS73 344 aa17.23■□□□□ 0.35
HDAC1-208ENST00000482310 ZNF521Q96K83 1311 aa17.22■□□□□ 0.35
HDAC1-208ENST00000482310 TUBGCP6Q96RT7 1819 aa17.22■□□□□ 0.35
HDAC1-208ENST00000482310 GNAI1P63096 354 aa17.22■□□□□ 0.35
HDAC1-208ENST00000482310 R3HDM1Q15032 1099 aaKnown RBP17.22■□□□□ 0.35
HDAC1-208ENST00000482310 WDR63Q8IWG1 891 aa17.22■□□□□ 0.35
HDAC1-208ENST00000482310 NGEFQ8N5V2 710 aa17.22■□□□□ 0.35
HDAC1-208ENST00000482310 SMARCC1Q92922 1105 aaPredicted RBP17.22■□□□□ 0.35
HDAC1-208ENST00000482310 CDCA7LQ96GN5 454 aa17.22■□□□□ 0.35
HDAC1-208ENST00000482310 CFAP44Q96MT7 982 aa17.22■□□□□ 0.35
HDAC1-208ENST00000482310 IFT57Q9NWB7 429 aa17.22■□□□□ 0.35
HDAC1-208ENST00000482310 KRT24Q2M2I5 525 aa17.21■□□□□ 0.35
HDAC1-208ENST00000482310 CAMKK2Q96RR4 588 aa17.21■□□□□ 0.35
HDAC1-208ENST00000482310 ZBED9Q6R2W3 1325 aa17.21■□□□□ 0.34
HDAC1-208ENST00000482310 MYH14Q7Z406 1995 aaKnown RBP17.2■□□□□ 0.34
HDAC1-208ENST00000482310 CHL1O00533 1208 aa17.2■□□□□ 0.34
HDAC1-208ENST00000482310 GOLGA2Q08379 1002 aa17.2■□□□□ 0.34
HDAC1-208ENST00000482310 NCBP3Q53F19 620 aaKnown RBP17.2■□□□□ 0.34
HDAC1-208ENST00000482310 ZNF496Q96IT1 587 aaPredicted RBP17.2■□□□□ 0.34
HDAC1-208ENST00000482310 CCNL1Q9UK58 526 aaPredicted RBP17.2■□□□□ 0.34
HDAC1-208ENST00000482310 FANCIQ9NVI1 1328 aa17.2■□□□□ 0.34
HDAC1-208ENST00000482310 ZNF831Q5JPB2 1677 aa17.2■□□□□ 0.34
HDAC1-208ENST00000482310 C4BP0C0L5 1744 aa17.19■□□□□ 0.34
HDAC1-208ENST00000482310 LOC102724428A0A0B4J2F2 783 aa17.19■□□□□ 0.34
HDAC1-208ENST00000482310 PRAMEF22A3QJZ6 481 aa17.19■□□□□ 0.34
HDAC1-208ENST00000482310 ATP6V1AP38606 617 aa17.19■□□□□ 0.34
HDAC1-208ENST00000482310 SIK1P57059 783 aa17.19■□□□□ 0.34
HDAC1-208ENST00000482310 FMNL2Q96PY5 1086 aa17.19■□□□□ 0.34
HDAC1-208ENST00000482310 IL16Q14005 1332 aa17.19■□□□□ 0.34
HDAC1-208ENST00000482310 CICQ96RK0 1608 aaPredicted RBP17.18■□□□□ 0.34
HDAC1-208ENST00000482310 ZNF853P0CG23 659 aa17.18■□□□□ 0.34
HDAC1-208ENST00000482310 TXNRD1Q16881 649 aa17.18■□□□□ 0.34
HDAC1-208ENST00000482310 SLC4A9Q96Q91 983 aa17.18■□□□□ 0.34
HDAC1-208ENST00000482310 HEG1Q9ULI3 1381 aa17.17■□□□□ 0.34
HDAC1-208ENST00000482310 ELL2O00472 640 aaPredicted RBP17.17■□□□□ 0.34
HDAC1-208ENST00000482310 EIF4A1P60842 406 aaKnown RBP17.17■□□□□ 0.34
HDAC1-208ENST00000482310 PLSCR1O15162 318 aa17.16■□□□□ 0.34
HDAC1-208ENST00000482310 ITPK1Q13572 414 aa17.16■□□□□ 0.34
HDAC1-208ENST00000482310 DNAJC10Q8IXB1 793 aa17.16■□□□□ 0.34
HDAC1-208ENST00000482310 NECTIN2Q92692 538 aa17.16■□□□□ 0.34
HDAC1-208ENST00000482310 MYH16Q9H6N6 1097 aa17.16■□□□□ 0.34
HDAC1-208ENST00000482310 LRRC4BQ9NT99 713 aa17.16■□□□□ 0.34
HDAC1-208ENST00000482310 UBR3Q6ZT12 1888 aa17.16■□□□□ 0.34
HDAC1-208ENST00000482310 E9PSI1 815 aa17.15■□□□□ 0.34
HDAC1-208ENST00000482310 SLFN5Q08AF3 891 aa17.15■□□□□ 0.34
HDAC1-208ENST00000482310 PROM2Q8N271 834 aa17.15■□□□□ 0.34
HDAC1-208ENST00000482310 BABAM1Q9NWV8 329 aa17.15■□□□□ 0.34
HDAC1-208ENST00000482310 EXOSC9Q06265 439 aaKnown RBP17.14■□□□□ 0.33
HDAC1-208ENST00000482310 C8orf58Q8NAV2 365 aa17.14■□□□□ 0.33
HDAC1-208ENST00000482310 LINC00116Q8NCU8 138 aa17.14■□□□□ 0.33
HDAC1-208ENST00000482310 EIF2S2P20042 333 aaKnown RBP17.13■□□□□ 0.33
HDAC1-208ENST00000482310 PIP4K2AP48426 406 aaPredicted RBP17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms