RNA–Protein interactions for RNA: ENST00000482257.1

HLA-F-225, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 585 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-225ENST00000482257 SCN11AQ9UI33 1791 aa20.23■□□□□ 0.83
HLA-F-225ENST00000482257 PLSCR1O15162 318 aa20.22■□□□□ 0.83
HLA-F-225ENST00000482257 RNMTO43148 476 aaKnown RBP20.22■□□□□ 0.83
HLA-F-225ENST00000482257 PROM2Q8N271 834 aa20.22■□□□□ 0.83
HLA-F-225ENST00000482257 KAT6BQ8WYB5 2073 aa20.22■□□□□ 0.83
HLA-F-225ENST00000482257 MCM10Q7L590 875 aa20.21■□□□□ 0.83
HLA-F-225ENST00000482257 CEMIPQ8WUJ3 1361 aa20.21■□□□□ 0.83
HLA-F-225ENST00000482257 ADAMTS7Q9UKP4 1686 aa20.2■□□□□ 0.82
HLA-F-225ENST00000482257 ERVV-2B6SEH9 535 aa20.2■□□□□ 0.82
HLA-F-225ENST00000482257 TEFQ10587 303 aa20.2■□□□□ 0.82
HLA-F-225ENST00000482257 IL17REQ8NFR9 667 aa20.2■□□□□ 0.82
HLA-F-225ENST00000482257 IL16Q14005 1332 aa20.2■□□□□ 0.82
HLA-F-225ENST00000482257 ZNF521Q96K83 1311 aa20.2■□□□□ 0.82
HLA-F-225ENST00000482257 BTAF1O14981 1849 aa20.2■□□□□ 0.82
HLA-F-225ENST00000482257 GOLGA2Q08379 1002 aa20.19■□□□□ 0.82
HLA-F-225ENST00000482257 DCTN1Q14203 1278 aa20.19■□□□□ 0.82
HLA-F-225ENST00000482257 ANO8Q9HCE9 1232 aaPredicted RBP20.19■□□□□ 0.82
HLA-F-225ENST00000482257 KDM6AO15550 1401 aaPredicted RBP20.19■□□□□ 0.82
HLA-F-225ENST00000482257 LRP5O75197 1615 aa20.18■□□□□ 0.82
HLA-F-225ENST00000482257 LGR6Q9HBX8 967 aa20.18■□□□□ 0.82
HLA-F-225ENST00000482257 DOT1LQ8TEK3 1739 aa20.17■□□□□ 0.82
HLA-F-225ENST00000482257 CABP4P57796 275 aa20.17■□□□□ 0.82
HLA-F-225ENST00000482257 GNAI1P63096 354 aa20.17■□□□□ 0.82
HLA-F-225ENST00000482257 TAF7Q15545 349 aaPredicted RBP20.16■□□□□ 0.82
HLA-F-225ENST00000482257 THUMPD2Q9BTF0 503 aaKnown RBP20.16■□□□□ 0.82
HLA-F-225ENST00000482257 SLC52A2Q9HAB3 445 aa20.16■□□□□ 0.82
HLA-F-225ENST00000482257 IFT57Q9NWB7 429 aa20.16■□□□□ 0.82
HLA-F-225ENST00000482257 BABAM1Q9NWV8 329 aa20.16■□□□□ 0.82
HLA-F-225ENST00000482257 E9PSI1 815 aa20.15■□□□□ 0.82
HLA-F-225ENST00000482257 MYH16Q9H6N6 1097 aa20.15■□□□□ 0.82
HLA-F-225ENST00000482257 MRC1P22897 1456 aa20.14■□□□□ 0.81
HLA-F-225ENST00000482257 CFAP44Q96MT7 982 aa20.14■□□□□ 0.81
HLA-F-225ENST00000482257 TMOD3Q9NYL9 352 aa20.14■□□□□ 0.81
HLA-F-225ENST00000482257 TXNRD1Q16881 649 aa20.13■□□□□ 0.81
HLA-F-225ENST00000482257 LAS1LQ9Y4W2 734 aaKnown RBP20.13■□□□□ 0.81
HLA-F-225ENST00000482257 ITGB4P16144 1822 aa20.13■□□□□ 0.81
HLA-F-225ENST00000482257 SIPA1L3O60292 1781 aaPredicted RBP20.13■□□□□ 0.81
HLA-F-225ENST00000482257 TOGARAM1Q9Y4F4 1720 aa20.13■□□□□ 0.81
HLA-F-225ENST00000482257 NFATC2IPQ8NCF5 419 aa20.12■□□□□ 0.81
HLA-F-225ENST00000482257 PAPPAQ13219 1627 aa20.12■□□□□ 0.81
HLA-F-225ENST00000482257 BTBD11A6QL63 1104 aa20.11■□□□□ 0.81
HLA-F-225ENST00000482257 SYTL4Q96C24 671 aaPredicted RBP20.11■□□□□ 0.81
HLA-F-225ENST00000482257 CHL1O00533 1208 aa20.1■□□□□ 0.81
HLA-F-225ENST00000482257 ZNF853P0CG23 659 aa20.1■□□□□ 0.81
HLA-F-225ENST00000482257 PRIM1P49642 420 aaKnown RBP20.1■□□□□ 0.81
HLA-F-225ENST00000482257 SLFN5Q08AF3 891 aa20.1■□□□□ 0.81
HLA-F-225ENST00000482257 TSPYL4Q9UJ04 414 aa20.1■□□□□ 0.81
HLA-F-225ENST00000482257 NBPF14Q5TI25 921 aa20.09■□□□□ 0.81
HLA-F-225ENST00000482257 CASZ1Q86V15 1759 aa20.08■□□□□ 0.81
HLA-F-225ENST00000482257 PDGFDQ9GZP0 370 aaPredicted RBP20.08■□□□□ 0.81
HLA-F-225ENST00000482257 LRRC4BQ9NT99 713 aa20.08■□□□□ 0.81
HLA-F-225ENST00000482257 TTC5Q8N0Z6 440 aa20.07■□□□□ 0.8
HLA-F-225ENST00000482257 CDCA7LQ96GN5 454 aa20.07■□□□□ 0.8
HLA-F-225ENST00000482257 MBIPQ9NS73 344 aa20.07■□□□□ 0.8
HLA-F-225ENST00000482257 KDM3BQ7LBC6 1761 aa20.06■□□□□ 0.8
HLA-F-225ENST00000482257 PIGBQ92521 554 aa20.06■□□□□ 0.8
HLA-F-225ENST00000482257 FANCIQ9NVI1 1328 aa20.05■□□□□ 0.8
HLA-F-225ENST00000482257 LY75O60449 1722 aa20.05■□□□□ 0.8
HLA-F-225ENST00000482257 TRMT2AQ8IZ69 625 aaKnown RBP20.05■□□□□ 0.8
HLA-F-225ENST00000482257 SPINK5Q9NQ38 1064 aaPredicted RBP20.05■□□□□ 0.8
HLA-F-225ENST00000482257 MIS18AQ9NYP9 233 aa20.05■□□□□ 0.8
HLA-F-225ENST00000482257 ZNF790Q6PG37 636 aa20.04■□□□□ 0.8
HLA-F-225ENST00000482257 SMARCC1Q92922 1105 aaPredicted RBP20.04■□□□□ 0.8
HLA-F-225ENST00000482257 KCNQ4P56696 695 aa20.03■□□□□ 0.8
HLA-F-225ENST00000482257 DUSP27Q5VZP5 1158 aa20.03■□□□□ 0.8
HLA-F-225ENST00000482257 TSR2Q969E8 191 aaKnown RBP20.03■□□□□ 0.8
HLA-F-225ENST00000482257 SLC15A2Q16348 729 aa20.02■□□□□ 0.8
HLA-F-225ENST00000482257 ZNF827Q17R98 1081 aa20.02■□□□□ 0.8
HLA-F-225ENST00000482257 SLC39A6Q13433 755 aa20.01■□□□□ 0.79
HLA-F-225ENST00000482257 FMNL2Q96PY5 1086 aa20.01■□□□□ 0.79
HLA-F-225ENST00000482257 SOS1Q07889 1333 aaPredicted RBP20.01■□□□□ 0.79
HLA-F-225ENST00000482257 CHMP4AQ9BY43 222 aa20■□□□□ 0.79
HLA-F-225ENST00000482257 ATG3Q9NT62 314 aa20■□□□□ 0.79
HLA-F-225ENST00000482257 STK32BQ9NY57 414 aa20■□□□□ 0.79
HLA-F-225ENST00000482257 UBR2Q8IWV8 1755 aa19.99■□□□□ 0.79
HLA-F-225ENST00000482257 CT47B1P0C2W7 299 aaPredicted RBP19.99■□□□□ 0.79
HLA-F-225ENST00000482257 EIF4A1P60842 406 aaKnown RBP19.99■□□□□ 0.79
HLA-F-225ENST00000482257 EXOSC9Q06265 439 aaKnown RBP19.99■□□□□ 0.79
HLA-F-225ENST00000482257 ASAP1Q9ULH1 1129 aa19.99■□□□□ 0.79
HLA-F-225ENST00000482257 TUBGCP6Q96RT7 1819 aa19.98■□□□□ 0.79
HLA-F-225ENST00000482257 KCNQ3O43525 872 aa19.98■□□□□ 0.79
HLA-F-225ENST00000482257 CENPBP07199 599 aaPredicted RBP19.98■□□□□ 0.79
HLA-F-225ENST00000482257 HOXB7P09629 217 aa19.97■□□□□ 0.79
HLA-F-225ENST00000482257 SLC27A3Q5K4L6 730 aa19.97■□□□□ 0.79
HLA-F-225ENST00000482257 AKT1S1Q96B36 256 aa19.97■□□□□ 0.79
HLA-F-225ENST00000482257 PALLDQ8WX93 1383 aa19.96■□□□□ 0.79
HLA-F-225ENST00000482257 SNRPA1P09661 255 aaKnown RBP19.96■□□□□ 0.79
HLA-F-225ENST00000482257 HMGB2P26583 209 aaKnown RBP19.96■□□□□ 0.79
HLA-F-225ENST00000482257 VSIG10Q8N0Z9 540 aa19.96■□□□□ 0.79
HLA-F-225ENST00000482257 ZNF496Q96IT1 587 aaPredicted RBP19.96■□□□□ 0.79
HLA-F-225ENST00000482257 HEG1Q9ULI3 1381 aa19.95■□□□□ 0.79
HLA-F-225ENST00000482257 PTCD1O75127 700 aaKnown RBP19.95■□□□□ 0.78
HLA-F-225ENST00000482257 ZBTB7AO95365 584 aa19.95■□□□□ 0.78
HLA-F-225ENST00000482257 TWISTNBQ3B726 338 aaPredicted RBP19.95■□□□□ 0.78
HLA-F-225ENST00000482257 ZNF428Q96B54 188 aa19.95■□□□□ 0.78
HLA-F-225ENST00000482257 RBM42Q9BTD8 480 aaKnown RBP19.95■□□□□ 0.78
HLA-F-225ENST00000482257 TEX13AQ9BXU3 409 aaPredicted RBP19.95■□□□□ 0.78
HLA-F-225ENST00000482257 KCPQ6ZWJ8 1503 aa19.95■□□□□ 0.78
HLA-F-225ENST00000482257 C8orf58Q8NAV2 365 aa19.94■□□□□ 0.78
HLA-F-225ENST00000482257 SPON1Q9HCB6 807 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms