RNA–Protein interactions for RNA: ENST00000481205.5

RTN1-206, Transcript of reticulon 1, humanhuman

TSL 2

Gene RTN1, Length 3,169 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-206ENST00000481205 HMOX1P09601 288 aa6.9□□□□□ -1.3
RTN1-206ENST00000481205 RLBP1P12271 317 aa6.9□□□□□ -1.3
RTN1-206ENST00000481205 AXDND1Q5T1B0 1012 aaPredicted RBP6.9□□□□□ -1.3
RTN1-206ENST00000481205 ZKSCAN2Q63HK3 967 aa6.9□□□□□ -1.3
RTN1-206ENST00000481205 TSR2Q969E8 191 aaKnown RBP6.9□□□□□ -1.3
RTN1-206ENST00000481205 PLEKHF1Q96S99 279 aa6.9□□□□□ -1.3
RTN1-206ENST00000481205 SMC4Q9NTJ3 1288 aa6.9□□□□□ -1.3
RTN1-206ENST00000481205 PCDHB15Q9Y5E8 787 aa6.9□□□□□ -1.3
RTN1-206ENST00000481205 CPSF1Q10570 1443 aaKnown RBP6.9□□□□□ -1.3
RTN1-206ENST00000481205 ATP7BP35670 1465 aa6.9□□□□□ -1.3
RTN1-206ENST00000481205 CLCN1P35523 988 aa6.9□□□□□ -1.31
RTN1-206ENST00000481205 POLR3EQ9NVU0 708 aa6.9□□□□□ -1.31
RTN1-206ENST00000481205 EID1Q9Y6B2 187 aa6.9□□□□□ -1.31
RTN1-206ENST00000481205 STRCQ7RTU9 1775 aa6.9□□□□□ -1.31
RTN1-206ENST00000481205 OS9Q13438 667 aaPredicted RBP6.9□□□□□ -1.31
RTN1-206ENST00000481205 MCM6Q14566 821 aa6.9□□□□□ -1.31
RTN1-206ENST00000481205 FAM135BQ49AJ0 1406 aa6.9□□□□□ -1.31
RTN1-206ENST00000481205 DZIP1LQ8IYY4 767 aaKnown RBP6.9□□□□□ -1.31
RTN1-206ENST00000481205 THEMISQ8N1K5 641 aaPredicted RBP6.9□□□□□ -1.31
RTN1-206ENST00000481205 ZNF526Q8TF50 670 aaPredicted RBP6.9□□□□□ -1.31
RTN1-206ENST00000481205 ANKRD26Q9UPS8 1709 aa6.9□□□□□ -1.31
RTN1-206ENST00000481205 PHF14O94880 888 aa6.89□□□□□ -1.31
RTN1-206ENST00000481205 DSG3P32926 999 aa6.89□□□□□ -1.31
RTN1-206ENST00000481205 PHACTR3Q96KR7 559 aa6.89□□□□□ -1.31
RTN1-206ENST00000481205 NRKQ7Z2Y5 1582 aa6.89□□□□□ -1.31
RTN1-206ENST00000481205 DIAPH1O60610 1272 aaKnown RBP6.89□□□□□ -1.31
RTN1-206ENST00000481205 KCNA6P17658 529 aa6.89□□□□□ -1.31
RTN1-206ENST00000481205 ITPRIPQ8IWB1 547 aa6.89□□□□□ -1.31
RTN1-206ENST00000481205 TRIM35Q9UPQ4 493 aa6.89□□□□□ -1.31
RTN1-206ENST00000481205 ACEP12821 1306 aa6.89□□□□□ -1.31
RTN1-206ENST00000481205 KIF20BQ96Q89 1820 aa6.88□□□□□ -1.31
RTN1-206ENST00000481205 TMPOP42166 694 aaKnown RBP6.88□□□□□ -1.31
RTN1-206ENST00000481205 MVPQ14764 893 aaKnown RBP6.88□□□□□ -1.31
RTN1-206ENST00000481205 PROCA1Q8NCQ7 364 aaPredicted RBP6.88□□□□□ -1.31
RTN1-206ENST00000481205 THUMPD2Q9BTF0 503 aaKnown RBP6.88□□□□□ -1.31
RTN1-206ENST00000481205 AKAP12Q02952 1782 aa6.88□□□□□ -1.31
RTN1-206ENST00000481205 CCDC27Q2M243 656 aa6.88□□□□□ -1.31
RTN1-206ENST00000481205 MAP7D2Q96T17 732 aa6.88□□□□□ -1.31
RTN1-206ENST00000481205 CREBZFQ9NS37 354 aa6.88□□□□□ -1.31
RTN1-206ENST00000481205 PNPLA6Q8IY17 1366 aa6.88□□□□□ -1.31
RTN1-206ENST00000481205 SETD1BQ9UPS6 1966 aaKnown RBP6.88□□□□□ -1.31
RTN1-206ENST00000481205 PRKAR2BP31323 418 aa6.87□□□□□ -1.31
RTN1-206ENST00000481205 EXOSC9Q06265 439 aaKnown RBP6.87□□□□□ -1.31
RTN1-206ENST00000481205 DMTNQ08495 405 aa6.87□□□□□ -1.31
RTN1-206ENST00000481205 MAP2P11137 1827 aaKnown RBP6.87□□□□□ -1.31
RTN1-206ENST00000481205 EDC4Q6P2E9 1401 aaKnown RBP6.87□□□□□ -1.31
RTN1-206ENST00000481205 PSEN1P49768 467 aa6.87□□□□□ -1.31
RTN1-206ENST00000481205 SIRT1Q96EB6 747 aa6.87□□□□□ -1.31
RTN1-206ENST00000481205 PRDM16Q9HAZ2 1276 aa6.87□□□□□ -1.31
RTN1-206ENST00000481205 XIRP1Q702N8 1843 aaKnown RBP6.87□□□□□ -1.31
RTN1-206ENST00000481205 USP19O94966 1318 aa6.87□□□□□ -1.31
RTN1-206ENST00000481205 CDC42BPGQ6DT37 1551 aa6.87□□□□□ -1.31
RTN1-206ENST00000481205 RIPK4P57078 832 aa6.87□□□□□ -1.31
RTN1-206ENST00000481205 NUTM2GQ5VZR2 741 aa6.87□□□□□ -1.31
RTN1-206ENST00000481205 CERS3Q8IU89 383 aa6.87□□□□□ -1.31
RTN1-206ENST00000481205 TBX22Q9Y458 520 aa6.87□□□□□ -1.31
RTN1-206ENST00000481205 STRCP1A6NGW2 1772 aa6.87□□□□□ -1.31
RTN1-206ENST00000481205 COG3Q96JB2 828 aa6.86□□□□□ -1.31
RTN1-206ENST00000481205 DDX19BQ9UMR2 479 aa6.86□□□□□ -1.31
RTN1-206ENST00000481205 TTC21BQ7Z4L5 1316 aa6.86□□□□□ -1.31
RTN1-206ENST00000481205 MON2Q7Z3U7 1717 aa6.86□□□□□ -1.31
RTN1-206ENST00000481205 IL13P35225 146 aa6.86□□□□□ -1.31
RTN1-206ENST00000481205 LRRC7Q96NW7 1537 aa6.86□□□□□ -1.31
RTN1-206ENST00000481205 LMTK3Q96Q04 1460 aa6.86□□□□□ -1.31
RTN1-206ENST00000481205 CT47B1P0C2W7 299 aaPredicted RBP6.85□□□□□ -1.31
RTN1-206ENST00000481205 TBC1D32Q96NH3 1257 aa6.85□□□□□ -1.31
RTN1-206ENST00000481205 IPO8O15397 1037 aaKnown RBP6.85□□□□□ -1.31
RTN1-206ENST00000481205 SSH1Q8WYL5 1049 aa6.85□□□□□ -1.31
RTN1-206ENST00000481205 TBC1D2Q9BYX2 928 aa6.85□□□□□ -1.31
RTN1-206ENST00000481205 RGPD8O14715 1765 aaPredicted RBP6.85□□□□□ -1.31
RTN1-206ENST00000481205 FMN2Q9NZ56 1722 aa6.85□□□□□ -1.31
RTN1-206ENST00000481205 MARF1Q9Y4F3 1742 aaKnown RBP6.85□□□□□ -1.31
RTN1-206ENST00000481205 PTCH1Q13635 1447 aa6.85□□□□□ -1.31
RTN1-206ENST00000481205 FAM83GA6ND36 823 aa6.85□□□□□ -1.31
RTN1-206ENST00000481205 TRIM27P14373 513 aa6.85□□□□□ -1.31
RTN1-206ENST00000481205 HSP90AB2PQ58FF8 381 aa6.85□□□□□ -1.31
RTN1-206ENST00000481205 ATF7IPQ6VMQ6 1270 aa6.85□□□□□ -1.31
RTN1-206ENST00000481205 CCDC97Q96F63 343 aaPredicted RBP6.85□□□□□ -1.31
RTN1-206ENST00000481205 C22orf23Q9BZE7 217 aa6.85□□□□□ -1.31
RTN1-206ENST00000481205 NOB1Q9ULX3 412 aaKnown RBP6.85□□□□□ -1.31
RTN1-206ENST00000481205 ZBTB12Q9Y330 459 aaPredicted RBP6.85□□□□□ -1.31
RTN1-206ENST00000481205 KIF20AO95235 890 aa6.84□□□□□ -1.31
RTN1-206ENST00000481205 DCTN1Q14203 1278 aa6.84□□□□□ -1.31
RTN1-206ENST00000481205 TAF3Q5VWG9 929 aa6.84□□□□□ -1.31
RTN1-206ENST00000481205 DDX27Q96GQ7 796 aaKnown RBP6.84□□□□□ -1.31
RTN1-206ENST00000481205 RYDENQ9NUL5 291 aaKnown RBP6.84□□□□□ -1.31
RTN1-206ENST00000481205 ITSN1Q15811 1721 aa6.84□□□□□ -1.31
RTN1-206ENST00000481205 NALCNQ8IZF0 1738 aa6.84□□□□□ -1.31
RTN1-206ENST00000481205 GPR37O15354 613 aa6.84□□□□□ -1.31
RTN1-206ENST00000481205 RNF39Q9H2S5 420 aa6.84□□□□□ -1.31
RTN1-206ENST00000481205 EMILIN3Q9NT22 766 aa6.84□□□□□ -1.31
RTN1-206ENST00000481205 USP6P35125 1406 aa6.84□□□□□ -1.31
RTN1-206ENST00000481205 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.83□□□□□ -1.32
RTN1-206ENST00000481205 SETQ01105 290 aaPredicted RBP6.83□□□□□ -1.32
RTN1-206ENST00000481205 HSCBQ8IWL3 235 aa6.83□□□□□ -1.32
RTN1-206ENST00000481205 NGDNQ8NEJ9 315 aaKnown RBP6.83□□□□□ -1.32
RTN1-206ENST00000481205 KIF16BQ96L93 1317 aa6.83□□□□□ -1.32
RTN1-206ENST00000481205 POM121CA8CG34 1229 aa6.83□□□□□ -1.32
RTN1-206ENST00000481205 FCHSD2O94868 740 aa6.83□□□□□ -1.32
RTN1-206ENST00000481205 EIF4A2Q14240 407 aaKnown RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms