RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 SPRYD3Q8NCJ5 442 aa23.41■■□□□ 1.34
CCM2-214ENST00000481194 ANO2Q9NQ90 1003 aa23.41■■□□□ 1.34
CCM2-214ENST00000481194 RNMTO43148 476 aaKnown RBP23.4■■□□□ 1.34
CCM2-214ENST00000481194 TOMM22Q9NS69 142 aa23.4■■□□□ 1.34
CCM2-214ENST00000481194 MYD88Q99836 296 aa23.4■■□□□ 1.34
CCM2-214ENST00000481194 PHACTR3Q96KR7 559 aa23.4■■□□□ 1.34
CCM2-214ENST00000481194 FSD1Q9BTV5 496 aa23.39■■□□□ 1.34
CCM2-214ENST00000481194 ISY1Q9ULR0 285 aaKnown RBP23.39■■□□□ 1.34
CCM2-214ENST00000481194 PRR36Q9H6K5 1346 aa23.39■■□□□ 1.34
CCM2-214ENST00000481194 DIP2AQ14689 1571 aa23.39■■□□□ 1.33
CCM2-214ENST00000481194 HOXB7P09629 217 aa23.38■■□□□ 1.33
CCM2-214ENST00000481194 ZPR1O75312 459 aa23.38■■□□□ 1.33
CCM2-214ENST00000481194 MRPL50Q8N5N7 158 aaKnown RBP23.38■■□□□ 1.33
CCM2-214ENST00000481194 TTC39AQ5SRH9 613 aa23.38■■□□□ 1.33
CCM2-214ENST00000481194 KIF1BPQ96EK5 621 aa23.37■■□□□ 1.33
CCM2-214ENST00000481194 CDK12Q9NYV4 1490 aaPredicted RBP23.37■■□□□ 1.33
CCM2-214ENST00000481194 BTG4Q9NY30 223 aa23.37■■□□□ 1.33
CCM2-214ENST00000481194 FAM177BA6PVY3 158 aa23.37■■□□□ 1.33
CCM2-214ENST00000481194 C8orf37Q96NL8 207 aa23.37■■□□□ 1.33
CCM2-214ENST00000481194 MPHOSPH8Q99549 860 aa23.37■■□□□ 1.33
CCM2-214ENST00000481194 TRDNQ13061 729 aa23.37■■□□□ 1.33
CCM2-214ENST00000481194 SYNE3Q6ZMZ3 975 aa23.37■■□□□ 1.33
CCM2-214ENST00000481194 C22orf23Q9BZE7 217 aa23.36■■□□□ 1.33
CCM2-214ENST00000481194 RIMS1Q86UR5 1692 aaKnown RBP23.36■■□□□ 1.33
CCM2-214ENST00000481194 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.36■■□□□ 1.33
CCM2-214ENST00000481194 CEP170BQ9Y4F5 1589 aaPredicted RBP23.35■■□□□ 1.33
CCM2-214ENST00000481194 CEP126Q9P2H0 1117 aa23.35■■□□□ 1.33
CCM2-214ENST00000481194 ALDH1L1O75891 902 aa23.35■■□□□ 1.33
CCM2-214ENST00000481194 MAP3K2Q9Y2U5 619 aa23.35■■□□□ 1.33
CCM2-214ENST00000481194 CPLX2Q6PUV4 134 aaKnown RBP23.34■■□□□ 1.33
CCM2-214ENST00000481194 IGHMBP2P38935 993 aaKnown RBP23.34■■□□□ 1.33
CCM2-214ENST00000481194 SLKQ9H2G2 1235 aaPredicted RBP23.34■■□□□ 1.33
CCM2-214ENST00000481194 MED14O60244 1454 aa23.34■■□□□ 1.33
CCM2-214ENST00000481194 ZSCAN25Q6NSZ9 544 aa23.34■■□□□ 1.33
CCM2-214ENST00000481194 AKAP2Q9Y2D5 859 aa23.34■■□□□ 1.33
CCM2-214ENST00000481194 PTPRMP28827 1452 aa23.33■■□□□ 1.33
CCM2-214ENST00000481194 TAOK2Q9UL54 1235 aa23.33■■□□□ 1.33
CCM2-214ENST00000481194 APPP05067 770 aa23.33■■□□□ 1.33
CCM2-214ENST00000481194 PSMA5P28066 241 aa23.33■■□□□ 1.33
CCM2-214ENST00000481194 BCORL1Q5H9F3 1711 aa23.33■■□□□ 1.32
CCM2-214ENST00000481194 C20orf194Q5TEA3 1177 aa23.32■■□□□ 1.32
CCM2-214ENST00000481194 C8orf58Q8NAV2 365 aa23.32■■□□□ 1.32
CCM2-214ENST00000481194 WASHC4Q2M389 1173 aa23.32■■□□□ 1.32
CCM2-214ENST00000481194 SYAP1Q96A49 352 aaPredicted RBP23.32■■□□□ 1.32
CCM2-214ENST00000481194 CWC25Q9NXE8 425 aaPredicted RBP23.32■■□□□ 1.32
CCM2-214ENST00000481194 FER1L4A9Z1Z3 1794 aa23.32■■□□□ 1.32
CCM2-214ENST00000481194 VAMP4O75379 141 aa23.31■■□□□ 1.32
CCM2-214ENST00000481194 ATP6V1DQ9Y5K8 247 aa23.31■■□□□ 1.32
CCM2-214ENST00000481194 AACSQ86V21 672 aa23.31■■□□□ 1.32
CCM2-214ENST00000481194 F6X3S4 739 aa23.31■■□□□ 1.32
CCM2-214ENST00000481194 TRIM34Q9BYJ4 488 aa23.3■■□□□ 1.32
CCM2-214ENST00000481194 SIL1Q9H173 461 aa23.3■■□□□ 1.32
CCM2-214ENST00000481194 DNAJC2Q99543 621 aaKnown RBP23.29■■□□□ 1.32
CCM2-214ENST00000481194 CHPF2Q9P2E5 772 aa23.29■■□□□ 1.32
CCM2-214ENST00000481194 ANKRD13DQ6ZTN6 518 aa23.29■■□□□ 1.32
CCM2-214ENST00000481194 KSR2Q6VAB6 950 aa23.29■■□□□ 1.32
CCM2-214ENST00000481194 NBPF6Q5VWK0 638 aa23.28■■□□□ 1.32
CCM2-214ENST00000481194 NBPF4Q96M43 638 aa23.28■■□□□ 1.32
CCM2-214ENST00000481194 TRIM35Q9UPQ4 493 aa23.28■■□□□ 1.32
CCM2-214ENST00000481194 MROH1Q8NDA8 1641 aa23.28■■□□□ 1.32
CCM2-214ENST00000481194 PI4KAP2A4QPH2 592 aa23.28■■□□□ 1.32
CCM2-214ENST00000481194 CHL1O00533 1208 aa23.28■■□□□ 1.32
CCM2-214ENST00000481194 PI4KAP1Q8N8J0 262 aa23.28■■□□□ 1.32
CCM2-214ENST00000481194 TRIM44Q96DX7 344 aaPredicted RBP23.28■■□□□ 1.32
CCM2-214ENST00000481194 CCDC34Q96HJ3 373 aa23.28■■□□□ 1.32
CCM2-214ENST00000481194 LRRFIP2Q9Y608 721 aaKnown RBP23.28■■□□□ 1.32
CCM2-214ENST00000481194 TMEM131LA2VDJ0 1609 aa23.27■■□□□ 1.32
CCM2-214ENST00000481194 KIAA0232Q92628 1395 aa23.27■■□□□ 1.32
CCM2-214ENST00000481194 NOL8Q76FK4 1167 aaKnown RBP23.27■■□□□ 1.32
CCM2-214ENST00000481194 IQGAP1P46940 1657 aa23.27■■□□□ 1.32
CCM2-214ENST00000481194 HDAC1Q13547 482 aaPredicted RBP23.27■■□□□ 1.32
CCM2-214ENST00000481194 PPP1R42Q7Z4L9 355 aa23.27■■□□□ 1.32
CCM2-214ENST00000481194 ARHGEF25Q86VW2 580 aa23.27■■□□□ 1.32
CCM2-214ENST00000481194 NFATC2IPQ8NCF5 419 aa23.27■■□□□ 1.32
CCM2-214ENST00000481194 AK7Q96M32 723 aa23.27■■□□□ 1.32
CCM2-214ENST00000481194 FAM184AQ8NB25 1140 aa23.26■■□□□ 1.31
CCM2-214ENST00000481194 ERICH2A1L162 156 aa23.26■■□□□ 1.31
CCM2-214ENST00000481194 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.26■■□□□ 1.31
CCM2-214ENST00000481194 MCM2P49736 904 aa23.26■■□□□ 1.31
CCM2-214ENST00000481194 TRMT112Q9UI30 125 aaKnown RBP23.26■■□□□ 1.31
CCM2-214ENST00000481194 AKAP17AQ02040 695 aaKnown RBP23.26■■□□□ 1.31
CCM2-214ENST00000481194 ADAMTS13Q76LX8 1427 aa23.26■■□□□ 1.31
CCM2-214ENST00000481194 PPLO60437 1756 aa23.25■■□□□ 1.31
CCM2-214ENST00000481194 FBXW7Q969H0 707 aa23.25■■□□□ 1.31
CCM2-214ENST00000481194 IFIT5Q13325 482 aaKnown RBP23.25■■□□□ 1.31
CCM2-214ENST00000481194 RALYLQ86SE5 291 aaKnown RBP23.25■■□□□ 1.31
CCM2-214ENST00000481194 GOLGA6L6A8MZA4 724 aa23.25■■□□□ 1.31
CCM2-214ENST00000481194 IGSF1Q8N6C5 1336 aa23.25■■□□□ 1.31
CCM2-214ENST00000481194 ZNF335Q9H4Z2 1342 aaPredicted RBP23.25■■□□□ 1.31
CCM2-214ENST00000481194 TECPR2O15040 1411 aa23.24■■□□□ 1.31
CCM2-214ENST00000481194 GLRX3O76003 335 aaKnown RBP23.24■■□□□ 1.31
CCM2-214ENST00000481194 TPRNQ4KMQ1 711 aa23.24■■□□□ 1.31
CCM2-214ENST00000481194 SLC52A2Q9HAB3 445 aa23.24■■□□□ 1.31
CCM2-214ENST00000481194 DDX17Q92841 729 aaKnown RBP23.24■■□□□ 1.31
CCM2-214ENST00000481194 DDX11L8A8MPP1 907 aa23.23■■□□□ 1.31
CCM2-214ENST00000481194 MX1P20591 662 aa23.23■■□□□ 1.31
CCM2-214ENST00000481194 RABEP1Q15276 862 aa23.23■■□□□ 1.31
CCM2-214ENST00000481194 ANKRD18BA2A2Z9 1011 aa23.23■■□□□ 1.31
CCM2-214ENST00000481194 H3BQV1 296 aa23.23■■□□□ 1.31
CCM2-214ENST00000481194 SLC39A6Q13433 755 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms