RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 AMOTQ4VCS5 1084 aa16.27■□□□□ 0.2
TRA2B-212ENST00000480461 NLGN2Q8NFZ4 835 aa16.27■□□□□ 0.2
TRA2B-212ENST00000480461 AKT1S1Q96B36 256 aa16.27■□□□□ 0.2
TRA2B-212ENST00000480461 PNPLA7Q6ZV29 1317 aa16.26■□□□□ 0.19
TRA2B-212ENST00000480461 POLD1P28340 1107 aa16.26■□□□□ 0.19
TRA2B-212ENST00000480461 ZNF530Q6P9A1 599 aaPredicted RBP16.26■□□□□ 0.19
TRA2B-212ENST00000480461 SLC16A10Q8TF71 515 aa16.26■□□□□ 0.19
TRA2B-212ENST00000480461 IFNL2Q8IZJ0 200 aa16.25■□□□□ 0.19
TRA2B-212ENST00000480461 LGR6Q9HBX8 967 aa16.25■□□□□ 0.19
TRA2B-212ENST00000480461 PCDH11XQ9BZA7 1347 aa16.24■□□□□ 0.19
TRA2B-212ENST00000480461 PCDH11YQ9BZA8 1340 aa16.24■□□□□ 0.19
TRA2B-212ENST00000480461 FAM9BQ8IZU0 186 aa16.24■□□□□ 0.19
TRA2B-212ENST00000480461 PLEKHG2Q9H7P9 1386 aa16.24■□□□□ 0.19
TRA2B-212ENST00000480461 PKD1L3Q7Z443 1732 aa16.23■□□□□ 0.19
TRA2B-212ENST00000480461 YBX3P16989 372 aaKnown RBP eCLIP16.23■□□□□ 0.19
TRA2B-212ENST00000480461 MPRIPQ6WCQ1 1025 aa16.23■□□□□ 0.19
TRA2B-212ENST00000480461 RUNDC1Q96C34 613 aa16.23■□□□□ 0.19
TRA2B-212ENST00000480461 ATP10DQ9P241 1426 aa16.22■□□□□ 0.19
TRA2B-212ENST00000480461 MSH5O43196 834 aa16.22■□□□□ 0.19
TRA2B-212ENST00000480461 PRIM1P49642 420 aaKnown RBP16.22■□□□□ 0.19
TRA2B-212ENST00000480461 AKAP4Q5JQC9 854 aa16.22■□□□□ 0.19
TRA2B-212ENST00000480461 SLC27A3Q5K4L6 730 aa16.22■□□□□ 0.19
TRA2B-212ENST00000480461 IL17REQ8NFR9 667 aa16.22■□□□□ 0.19
TRA2B-212ENST00000480461 RRP7AQ9Y3A4 280 aaKnown RBP16.21■□□□□ 0.19
TRA2B-212ENST00000480461 APAF1O14727 1248 aa16.2■□□□□ 0.18
TRA2B-212ENST00000480461 GRIN3BO60391 1043 aa16.2■□□□□ 0.18
TRA2B-212ENST00000480461 TMPOP42166 694 aaKnown RBP16.2■□□□□ 0.18
TRA2B-212ENST00000480461 NFE2L2Q16236 605 aa16.2■□□□□ 0.18
TRA2B-212ENST00000480461 GAS2L2Q8NHY3 880 aa16.2■□□□□ 0.18
TRA2B-212ENST00000480461 PNNQ9H307 717 aaKnown RBP16.2■□□□□ 0.18
TRA2B-212ENST00000480461 KDM6AO15550 1401 aaPredicted RBP16.19■□□□□ 0.18
TRA2B-212ENST00000480461 LY75O60449 1722 aa16.19■□□□□ 0.18
TRA2B-212ENST00000480461 RNMTO43148 476 aaKnown RBP16.19■□□□□ 0.18
TRA2B-212ENST00000480461 DCTN1Q14203 1278 aa16.19■□□□□ 0.18
TRA2B-212ENST00000480461 C1orf141Q5JVX7 400 aa16.19■□□□□ 0.18
TRA2B-212ENST00000480461 DCAF5Q96JK2 942 aa16.19■□□□□ 0.18
TRA2B-212ENST00000480461 DOT1LQ8TEK3 1739 aa16.19■□□□□ 0.18
TRA2B-212ENST00000480461 ADCY9O60503 1353 aa16.18■□□□□ 0.18
TRA2B-212ENST00000480461 GNAT3A8MTJ3 354 aa16.18■□□□□ 0.18
TRA2B-212ENST00000480461 TFCP2L1Q9NZI6 479 aa16.18■□□□□ 0.18
TRA2B-212ENST00000480461 KCNQ4P56696 695 aa16.17■□□□□ 0.18
TRA2B-212ENST00000480461 RIPK4P57078 832 aa16.17■□□□□ 0.18
TRA2B-212ENST00000480461 NEUROD2Q15784 382 aa16.17■□□□□ 0.18
TRA2B-212ENST00000480461 MCM10Q7L590 875 aa16.17■□□□□ 0.18
TRA2B-212ENST00000480461 PIGBQ92521 554 aa16.17■□□□□ 0.18
TRA2B-212ENST00000480461 TRIM35Q9UPQ4 493 aa16.17■□□□□ 0.18
TRA2B-212ENST00000480461 KAT6BQ8WYB5 2073 aa16.16■□□□□ 0.18
TRA2B-212ENST00000480461 HSP90AB1P08238 724 aaKnown RBP16.16■□□□□ 0.18
TRA2B-212ENST00000480461 HSPA6P17066 643 aa16.16■□□□□ 0.18
TRA2B-212ENST00000480461 NFATC2IPQ8NCF5 419 aa16.16■□□□□ 0.18
TRA2B-212ENST00000480461 THUMPD2Q9BTF0 503 aaKnown RBP16.16■□□□□ 0.18
TRA2B-212ENST00000480461 MAPK8IP3Q9UPT6 1336 aa16.16■□□□□ 0.18
TRA2B-212ENST00000480461 ERVV-2B6SEH9 535 aa16.15■□□□□ 0.18
TRA2B-212ENST00000480461 SYTL4Q96C24 671 aaPredicted RBP16.15■□□□□ 0.18
TRA2B-212ENST00000480461 HTATSF1O43719 755 aaKnown RBP16.14■□□□□ 0.17
TRA2B-212ENST00000480461 NEFMP07197 916 aa16.14■□□□□ 0.17
TRA2B-212ENST00000480461 GPBP1L1Q9HC44 474 aaPredicted RBP16.14■□□□□ 0.17
TRA2B-212ENST00000480461 CEMIPQ8WUJ3 1361 aa16.13■□□□□ 0.17
TRA2B-212ENST00000480461 CABP4P57796 275 aa16.13■□□□□ 0.17
TRA2B-212ENST00000480461 SLC52A2Q9HAB3 445 aa16.13■□□□□ 0.17
TRA2B-212ENST00000480461 TOGARAM1Q9Y4F4 1720 aa16.13■□□□□ 0.17
TRA2B-212ENST00000480461 ASAP1Q9ULH1 1129 aa16.12■□□□□ 0.17
TRA2B-212ENST00000480461 COL23A1Q86Y22 540 aaPredicted RBP16.11■□□□□ 0.17
TRA2B-212ENST00000480461 ATG3Q9NT62 314 aa16.11■□□□□ 0.17
TRA2B-212ENST00000480461 MSL1Q68DK7 614 aa16.1■□□□□ 0.17
TRA2B-212ENST00000480461 RTF1Q92541 710 aaKnown RBP16.1■□□□□ 0.17
TRA2B-212ENST00000480461 TMOD3Q9NYL9 352 aa16.1■□□□□ 0.17
TRA2B-212ENST00000480461 MIS18AQ9NYP9 233 aa16.1■□□□□ 0.17
TRA2B-212ENST00000480461 CCNL1Q9UK58 526 aaPredicted RBP16.1■□□□□ 0.17
TRA2B-212ENST00000480461 SALL2Q9Y467 1007 aaPredicted RBP16.1■□□□□ 0.17
TRA2B-212ENST00000480461 ADAMTS7Q9UKP4 1686 aa16.1■□□□□ 0.17
TRA2B-212ENST00000480461 C5P01031 1676 aa16.09■□□□□ 0.17
TRA2B-212ENST00000480461 KCNQ3O43525 872 aa16.09■□□□□ 0.17
TRA2B-212ENST00000480461 SLC39A6Q13433 755 aa16.09■□□□□ 0.17
TRA2B-212ENST00000480461 ZNF526Q8TF50 670 aaPredicted RBP16.09■□□□□ 0.17
TRA2B-212ENST00000480461 CD2APQ9Y5K6 639 aa16.08■□□□□ 0.16
TRA2B-212ENST00000480461 TAF7Q15545 349 aaPredicted RBP16.07■□□□□ 0.16
TRA2B-212ENST00000480461 WWC1Q8IX03 1113 aa16.07■□□□□ 0.16
TRA2B-212ENST00000480461 SLC4A9Q96Q91 983 aa16.07■□□□□ 0.16
TRA2B-212ENST00000480461 SCN11AQ9UI33 1791 aa16.07■□□□□ 0.16
TRA2B-212ENST00000480461 DLG5Q8TDM6 1919 aa16.07■□□□□ 0.16
TRA2B-212ENST00000480461 ITGB4P16144 1822 aa16.06■□□□□ 0.16
TRA2B-212ENST00000480461 TEFQ10587 303 aa16.06■□□□□ 0.16
TRA2B-212ENST00000480461 CCDC27Q2M243 656 aa16.06■□□□□ 0.16
TRA2B-212ENST00000480461 NCBP3Q53F19 620 aaKnown RBP16.06■□□□□ 0.16
TRA2B-212ENST00000480461 MRC1P22897 1456 aa16.05■□□□□ 0.16
TRA2B-212ENST00000480461 BTBD11A6QL63 1104 aa16.04■□□□□ 0.16
TRA2B-212ENST00000480461 LMOD3Q0VAK6 560 aa16.04■□□□□ 0.16
TRA2B-212ENST00000480461 TAF1LQ8IZX4 1826 aa16.03■□□□□ 0.16
TRA2B-212ENST00000480461 ZNF521Q96K83 1311 aa16.03■□□□□ 0.16
TRA2B-212ENST00000480461 CHL1O00533 1208 aa16.03■□□□□ 0.16
TRA2B-212ENST00000480461 KIF3CO14782 793 aa16.03■□□□□ 0.16
TRA2B-212ENST00000480461 PTCD1O75127 700 aaKnown RBP16.03■□□□□ 0.16
TRA2B-212ENST00000480461 ZNF853P0CG23 659 aa16.03■□□□□ 0.16
TRA2B-212ENST00000480461 ZNF790Q6PG37 636 aa16.03■□□□□ 0.16
TRA2B-212ENST00000480461 SPINK5Q9NQ38 1064 aaPredicted RBP16.03■□□□□ 0.16
TRA2B-212ENST00000480461 CICQ96RK0 1608 aaPredicted RBP16.03■□□□□ 0.16
TRA2B-212ENST00000480461 PALLDQ8WX93 1383 aa16.02■□□□□ 0.16
TRA2B-212ENST00000480461 SMARCC1Q92922 1105 aaPredicted RBP16.02■□□□□ 0.16
TRA2B-212ENST00000480461 ZNF496Q96IT1 587 aaPredicted RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms