RNA–Protein interactions for RNA: ENST00000479348.2

PCIF1-202, Transcript of PDX1 C-terminal inhibiting factor 1, humanhuman

TSL 1 (best)

Gene PCIF1, Length 1,324 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCIF1-202ENST00000479348 RIPK4P57078 832 aa18.42■□□□□ 0.54
PCIF1-202ENST00000479348 EZH2Q15910 746 aaKnown RBP18.41■□□□□ 0.54
PCIF1-202ENST00000479348 SLC27A3Q5K4L6 730 aa18.4■□□□□ 0.54
PCIF1-202ENST00000479348 FAM9BQ8IZU0 186 aa18.4■□□□□ 0.54
PCIF1-202ENST00000479348 APAF1O14727 1248 aa18.39■□□□□ 0.53
PCIF1-202ENST00000479348 TXNRD1Q16881 649 aa18.39■□□□□ 0.53
PCIF1-202ENST00000479348 NCBP3Q53F19 620 aaKnown RBP18.39■□□□□ 0.53
PCIF1-202ENST00000479348 MCM10Q7L590 875 aa18.39■□□□□ 0.53
PCIF1-202ENST00000479348 ATG3Q9NT62 314 aa18.39■□□□□ 0.53
PCIF1-202ENST00000479348 ASAP1Q9ULH1 1129 aa18.39■□□□□ 0.53
PCIF1-202ENST00000479348 PALLDQ8WX93 1383 aa18.38■□□□□ 0.53
PCIF1-202ENST00000479348 PROM2Q8N271 834 aa18.38■□□□□ 0.53
PCIF1-202ENST00000479348 DLG5Q8TDM6 1919 aa18.37■□□□□ 0.53
PCIF1-202ENST00000479348 VIRMAQ69YN4 1812 aaKnown RBP18.37■□□□□ 0.53
PCIF1-202ENST00000479348 DCTN1Q14203 1278 aa18.36■□□□□ 0.53
PCIF1-202ENST00000479348 TAF7Q15545 349 aaPredicted RBP18.36■□□□□ 0.53
PCIF1-202ENST00000479348 NEUROD2Q15784 382 aa18.36■□□□□ 0.53
PCIF1-202ENST00000479348 NGEFQ8N5V2 710 aa18.36■□□□□ 0.53
PCIF1-202ENST00000479348 RRP7AQ9Y3A4 280 aaKnown RBP18.36■□□□□ 0.53
PCIF1-202ENST00000479348 LY75O60449 1722 aa18.35■□□□□ 0.53
PCIF1-202ENST00000479348 RREB1Q92766 1687 aa18.34■□□□□ 0.53
PCIF1-202ENST00000479348 CCNL1Q9UK58 526 aaPredicted RBP18.34■□□□□ 0.53
PCIF1-202ENST00000479348 TRIM35Q9UPQ4 493 aa18.34■□□□□ 0.53
PCIF1-202ENST00000479348 LOC102724428A0A0B4J2F2 783 aa18.33■□□□□ 0.53
PCIF1-202ENST00000479348 BTBD11A6QL63 1104 aa18.33■□□□□ 0.53
PCIF1-202ENST00000479348 SIK1P57059 783 aa18.33■□□□□ 0.53
PCIF1-202ENST00000479348 CCDC27Q2M243 656 aa18.33■□□□□ 0.53
PCIF1-202ENST00000479348 SIPA1L3O60292 1781 aaPredicted RBP18.32■□□□□ 0.52
PCIF1-202ENST00000479348 CALD1Q05682 793 aaKnown RBP18.32■□□□□ 0.52
PCIF1-202ENST00000479348 NBPF14Q5TI25 921 aa18.32■□□□□ 0.52
PCIF1-202ENST00000479348 ZNF790Q6PG37 636 aa18.32■□□□□ 0.52
PCIF1-202ENST00000479348 TTC5Q8N0Z6 440 aa18.32■□□□□ 0.52
PCIF1-202ENST00000479348 LRRC4BQ9NT99 713 aa18.32■□□□□ 0.52
PCIF1-202ENST00000479348 BABAM1Q9NWV8 329 aa18.32■□□□□ 0.52
PCIF1-202ENST00000479348 SLC39A6Q13433 755 aa18.31■□□□□ 0.52
PCIF1-202ENST00000479348 RBM42Q9BTD8 480 aaKnown RBP18.31■□□□□ 0.52
PCIF1-202ENST00000479348 THUMPD2Q9BTF0 503 aaKnown RBP18.31■□□□□ 0.52
PCIF1-202ENST00000479348 ZNF831Q5JPB2 1677 aa18.3■□□□□ 0.52
PCIF1-202ENST00000479348 PTCD1O75127 700 aaKnown RBP18.3■□□□□ 0.52
PCIF1-202ENST00000479348 PAPPAQ13219 1627 aa18.3■□□□□ 0.52
PCIF1-202ENST00000479348 NUP188Q5SRE5 1749 aa18.29■□□□□ 0.52
PCIF1-202ENST00000479348 ATP6V1AP38606 617 aa18.29■□□□□ 0.52
PCIF1-202ENST00000479348 VSIG10Q8N0Z9 540 aa18.29■□□□□ 0.52
PCIF1-202ENST00000479348 FMNL2Q96PY5 1086 aa18.27■□□□□ 0.52
PCIF1-202ENST00000479348 SLC4A9Q96Q91 983 aa18.27■□□□□ 0.52
PCIF1-202ENST00000479348 KCNQ4P56696 695 aa18.26■□□□□ 0.51
PCIF1-202ENST00000479348 WWC1Q8IX03 1113 aa18.26■□□□□ 0.51
PCIF1-202ENST00000479348 ZNF496Q96IT1 587 aaPredicted RBP18.26■□□□□ 0.51
PCIF1-202ENST00000479348 TEX13AQ9BXU3 409 aaPredicted RBP18.26■□□□□ 0.51
PCIF1-202ENST00000479348 STK32BQ9NY57 414 aa18.26■□□□□ 0.51
PCIF1-202ENST00000479348 KCPQ6ZWJ8 1503 aa18.26■□□□□ 0.51
PCIF1-202ENST00000479348 UBR2Q8IWV8 1755 aa18.25■□□□□ 0.51
PCIF1-202ENST00000479348 CHL1O00533 1208 aa18.25■□□□□ 0.51
PCIF1-202ENST00000479348 ITPK1Q13572 414 aa18.25■□□□□ 0.51
PCIF1-202ENST00000479348 CFAP44Q96MT7 982 aa18.25■□□□□ 0.51
PCIF1-202ENST00000479348 TSPYL4Q9UJ04 414 aa18.25■□□□□ 0.51
PCIF1-202ENST00000479348 HEG1Q9ULI3 1381 aa18.25■□□□□ 0.51
PCIF1-202ENST00000479348 SLC15A2Q16348 729 aa18.24■□□□□ 0.51
PCIF1-202ENST00000479348 RC3H1Q5TC82 1133 aaKnown RBP18.24■□□□□ 0.51
PCIF1-202ENST00000479348 AKT1S1Q96B36 256 aa18.24■□□□□ 0.51
PCIF1-202ENST00000479348 IFT57Q9NWB7 429 aa18.24■□□□□ 0.51
PCIF1-202ENST00000479348 MIS18AQ9NYP9 233 aa18.24■□□□□ 0.51
PCIF1-202ENST00000479348 IL16Q14005 1332 aa18.24■□□□□ 0.51
PCIF1-202ENST00000479348 CICQ96RK0 1608 aaPredicted RBP18.24■□□□□ 0.51
PCIF1-202ENST00000479348 KCNQ3O43525 872 aa18.23■□□□□ 0.51
PCIF1-202ENST00000479348 GNAI1P63096 354 aa18.23■□□□□ 0.51
PCIF1-202ENST00000479348 WDR63Q8IWG1 891 aa18.23■□□□□ 0.51
PCIF1-202ENST00000479348 ANO8Q9HCE9 1232 aaPredicted RBP18.23■□□□□ 0.51
PCIF1-202ENST00000479348 C5P01031 1676 aa18.23■□□□□ 0.51
PCIF1-202ENST00000479348 SNRPA1P09661 255 aaKnown RBP18.23■□□□□ 0.51
PCIF1-202ENST00000479348 ZNF853P0CG23 659 aa18.23■□□□□ 0.51
PCIF1-202ENST00000479348 LINC00116Q8NCU8 138 aa18.23■□□□□ 0.51
PCIF1-202ENST00000479348 TAF1LQ8IZX4 1826 aa18.23■□□□□ 0.51
PCIF1-202ENST00000479348 STARD3NLO95772 234 aa18.22■□□□□ 0.51
PCIF1-202ENST00000479348 EIF4A1P60842 406 aaKnown RBP18.22■□□□□ 0.51
PCIF1-202ENST00000479348 LAS1LQ9Y4W2 734 aaKnown RBP18.22■□□□□ 0.51
PCIF1-202ENST00000479348 CNTNAP4Q9C0A0 1308 aa18.21■□□□□ 0.51
PCIF1-202ENST00000479348 KDM3BQ7LBC6 1761 aa18.21■□□□□ 0.51
PCIF1-202ENST00000479348 ZNF827Q17R98 1081 aa18.21■□□□□ 0.51
PCIF1-202ENST00000479348 DNAJC10Q8IXB1 793 aa18.21■□□□□ 0.51
PCIF1-202ENST00000479348 FLAD1Q8NFF5 587 aa18.21■□□□□ 0.51
PCIF1-202ENST00000479348 AK7Q96M32 723 aa18.21■□□□□ 0.51
PCIF1-202ENST00000479348 TFCP2L1Q9NZI6 479 aa18.21■□□□□ 0.51
PCIF1-202ENST00000479348 C4BP0C0L5 1744 aa18.2■□□□□ 0.5
PCIF1-202ENST00000479348 CYP19A1P11511 503 aaPredicted RBP18.2■□□□□ 0.5
PCIF1-202ENST00000479348 R3HDM1Q15032 1099 aaKnown RBP18.2■□□□□ 0.5
PCIF1-202ENST00000479348 SALL2Q9Y467 1007 aaPredicted RBP18.2■□□□□ 0.5
PCIF1-202ENST00000479348 SENP3-EIF4A1A0A087X0R7 540 aa18.19■□□□□ 0.5
PCIF1-202ENST00000479348 CRKLP46109 303 aaKnown RBP18.19■□□□□ 0.5
PCIF1-202ENST00000479348 TJP1Q07157 1748 aa18.19■□□□□ 0.5
PCIF1-202ENST00000479348 COL5A3P25940 1745 aaPredicted RBP18.18■□□□□ 0.5
PCIF1-202ENST00000479348 GIGYF1O75420 1035 aaPredicted RBP18.18■□□□□ 0.5
PCIF1-202ENST00000479348 MBIPQ9NS73 344 aa18.18■□□□□ 0.5
PCIF1-202ENST00000479348 CCDC87Q9NVE4 849 aa18.18■□□□□ 0.5
PCIF1-202ENST00000479348 ZNF521Q96K83 1311 aa18.18■□□□□ 0.5
PCIF1-202ENST00000479348 RPS6KA4O75676 772 aa18.17■□□□□ 0.5
PCIF1-202ENST00000479348 SSFA2P28290 1259 aa18.17■□□□□ 0.5
PCIF1-202ENST00000479348 RTCBQ9Y3I0 505 aaKnown RBP18.17■□□□□ 0.5
PCIF1-202ENST00000479348 PSDA5PKW4 1024 aaPredicted RBP18.16■□□□□ 0.5
PCIF1-202ENST00000479348 GNPATO15228 680 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms