RNA–Protein interactions for RNA: ENST00000479107.1

HLA-DPA1-247, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 5,025 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-247ENST00000479107 CABP1Q9NZU7 370 aa10.27□□□□□ -0.77
HLA-DPA1-247ENST00000479107 CPLX2Q6PUV4 134 aaKnown RBP10.27□□□□□ -0.77
HLA-DPA1-247ENST00000479107 GPBP1L1Q9HC44 474 aaPredicted RBP10.27□□□□□ -0.77
HLA-DPA1-247ENST00000479107 TULP1O00294 542 aaPredicted RBP10.27□□□□□ -0.77
HLA-DPA1-247ENST00000479107 ZHX1Q9UKY1 873 aaPredicted RBP10.27□□□□□ -0.77
HLA-DPA1-247ENST00000479107 CLEC11AQ9Y240 323 aa10.27□□□□□ -0.77
HLA-DPA1-247ENST00000479107 MAP3K1Q13233 1512 aa10.27□□□□□ -0.77
HLA-DPA1-247ENST00000479107 ZPR1O75312 459 aa10.26□□□□□ -0.77
HLA-DPA1-247ENST00000479107 PRIMPOLQ96LW4 560 aa10.26□□□□□ -0.77
HLA-DPA1-247ENST00000479107 NCOA3Q9Y6Q9 1424 aa10.26□□□□□ -0.77
HLA-DPA1-247ENST00000479107 IFIT2P09913 472 aaKnown RBP10.26□□□□□ -0.77
HLA-DPA1-247ENST00000479107 KLHL40Q2TBA0 621 aa10.26□□□□□ -0.77
HLA-DPA1-247ENST00000479107 NBPF1Q3BBV0 1214 aa10.26□□□□□ -0.77
HLA-DPA1-247ENST00000479107 CALRP27797 417 aaKnown RBP10.26□□□□□ -0.77
HLA-DPA1-247ENST00000479107 ANKRD20A12PQ8NF67 263 aa10.26□□□□□ -0.77
HLA-DPA1-247ENST00000479107 SDF4Q9BRK5 362 aa10.26□□□□□ -0.77
HLA-DPA1-247ENST00000479107 NKTRP30414 1462 aaKnown RBP10.26□□□□□ -0.77
HLA-DPA1-247ENST00000479107 PSMA5P28066 241 aa10.26□□□□□ -0.77
HLA-DPA1-247ENST00000479107 RASSF8Q8NHQ8 419 aa10.26□□□□□ -0.77
HLA-DPA1-247ENST00000479107 PANK2Q9BZ23 570 aa10.26□□□□□ -0.77
HLA-DPA1-247ENST00000479107 TEFQ10587 303 aa10.25□□□□□ -0.77
HLA-DPA1-247ENST00000479107 AEBP1Q8IUX7 1158 aa10.25□□□□□ -0.77
HLA-DPA1-247ENST00000479107 TMOD3Q9NYL9 352 aa10.25□□□□□ -0.77
HLA-DPA1-247ENST00000479107 CALCOCO1Q9P1Z2 691 aa10.25□□□□□ -0.77
HLA-DPA1-247ENST00000479107 PES1O00541 588 aaKnown RBP10.25□□□□□ -0.77
HLA-DPA1-247ENST00000479107 KINO60870 393 aaKnown RBP10.25□□□□□ -0.77
HLA-DPA1-247ENST00000479107 PARP3Q9Y6F1 533 aa10.25□□□□□ -0.77
HLA-DPA1-247ENST00000479107 KDM5CP41229 1560 aa10.25□□□□□ -0.77
HLA-DPA1-247ENST00000479107 ZBTB7AO95365 584 aa10.25□□□□□ -0.77
HLA-DPA1-247ENST00000479107 IL2RBP14784 551 aa10.25□□□□□ -0.77
HLA-DPA1-247ENST00000479107 RUFY1Q96T51 708 aa10.25□□□□□ -0.77
HLA-DPA1-247ENST00000479107 SSFA2P28290 1259 aa10.24□□□□□ -0.77
HLA-DPA1-247ENST00000479107 PLEKHO1Q53GL0 409 aaPredicted RBP10.24□□□□□ -0.77
HLA-DPA1-247ENST00000479107 RFC4P35249 363 aa10.24□□□□□ -0.77
HLA-DPA1-247ENST00000479107 C8orf34Q49A92 452 aa10.24□□□□□ -0.77
HLA-DPA1-247ENST00000479107 WWC1Q8IX03 1113 aa10.24□□□□□ -0.77
HLA-DPA1-247ENST00000479107 TNMDQ9H2S6 317 aa10.24□□□□□ -0.77
HLA-DPA1-247ENST00000479107 DUSP27Q5VZP5 1158 aa10.24□□□□□ -0.77
HLA-DPA1-247ENST00000479107 TRPM2O94759 1503 aa10.24□□□□□ -0.77
HLA-DPA1-247ENST00000479107 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.24□□□□□ -0.77
HLA-DPA1-247ENST00000479107 H0YHG0 523 aa10.24□□□□□ -0.77
HLA-DPA1-247ENST00000479107 KRT85P78386 507 aa10.24□□□□□ -0.77
HLA-DPA1-247ENST00000479107 FKBP5Q13451 457 aaPredicted RBP10.24□□□□□ -0.77
HLA-DPA1-247ENST00000479107 FAM182BQ5T319 152 aa10.24□□□□□ -0.77
HLA-DPA1-247ENST00000479107 TSR2Q969E8 191 aaKnown RBP10.24□□□□□ -0.77
HLA-DPA1-247ENST00000479107 FBXW7Q969H0 707 aa10.24□□□□□ -0.77
HLA-DPA1-247ENST00000479107 CGNQ9P2M7 1197 aaKnown RBP10.24□□□□□ -0.77
HLA-DPA1-247ENST00000479107 KIF2AO00139 706 aaPredicted RBP10.23□□□□□ -0.77
HLA-DPA1-247ENST00000479107 CPLX1O14810 134 aa10.23□□□□□ -0.77
HLA-DPA1-247ENST00000479107 CNTROBQ8N137 903 aa10.23□□□□□ -0.77
HLA-DPA1-247ENST00000479107 C1orf115Q9H7X2 142 aa10.23□□□□□ -0.77
HLA-DPA1-247ENST00000479107 CCNL1Q9UK58 526 aaPredicted RBP10.23□□□□□ -0.77
HLA-DPA1-247ENST00000479107 CLTCQ00610 1675 aaKnown RBP10.23□□□□□ -0.77
HLA-DPA1-247ENST00000479107 PREX2Q70Z35 1606 aa10.23□□□□□ -0.77
HLA-DPA1-247ENST00000479107 ERICH4A6NGS2 130 aa10.23□□□□□ -0.77
HLA-DPA1-247ENST00000479107 SMC2O95347 1197 aa10.23□□□□□ -0.77
HLA-DPA1-247ENST00000479107 RDXP35241 583 aaKnown RBP10.23□□□□□ -0.77
HLA-DPA1-247ENST00000479107 LRRFIP1Q32MZ4 808 aaKnown RBP10.23□□□□□ -0.77
HLA-DPA1-247ENST00000479107 HS1BP3Q53T59 392 aa10.23□□□□□ -0.77
HLA-DPA1-247ENST00000479107 PPP4R3BQ5MIZ7 849 aa10.23□□□□□ -0.77
HLA-DPA1-247ENST00000479107 MPRIPQ6WCQ1 1025 aa10.23□□□□□ -0.77
HLA-DPA1-247ENST00000479107 ZNF428Q96B54 188 aa10.23□□□□□ -0.77
HLA-DPA1-247ENST00000479107 OFD1O75665 1012 aa10.23□□□□□ -0.77
HLA-DPA1-247ENST00000479107 CABP4P57796 275 aa10.23□□□□□ -0.77
HLA-DPA1-247ENST00000479107 TRIM29Q14134 588 aa10.23□□□□□ -0.77
HLA-DPA1-247ENST00000479107 OLFM4Q6UX06 510 aa10.23□□□□□ -0.77
HLA-DPA1-247ENST00000479107 SYNE3Q6ZMZ3 975 aa10.23□□□□□ -0.77
HLA-DPA1-247ENST00000479107 ACEP12821 1306 aa10.22□□□□□ -0.77
HLA-DPA1-247ENST00000479107 PDIA4P13667 645 aaKnown RBP10.22□□□□□ -0.77
HLA-DPA1-247ENST00000479107 RRAGDQ9NQL2 400 aaPredicted RBP10.22□□□□□ -0.77
HLA-DPA1-247ENST00000479107 THRAP3Q9Y2W1 955 aaKnown RBP10.22□□□□□ -0.77
HLA-DPA1-247ENST00000479107 ADGRF5Q8IZF2 1346 aa10.22□□□□□ -0.77
HLA-DPA1-247ENST00000479107 BAG4O95429 457 aaKnown RBP10.22□□□□□ -0.77
HLA-DPA1-247ENST00000479107 GNAI3P08754 354 aa10.22□□□□□ -0.77
HLA-DPA1-247ENST00000479107 RARSP54136 660 aaKnown RBP10.22□□□□□ -0.77
HLA-DPA1-247ENST00000479107 ARHGAP31Q2M1Z3 1444 aa10.22□□□□□ -0.77
HLA-DPA1-247ENST00000479107 ADGRL3Q9HAR2 1447 aa10.22□□□□□ -0.77
HLA-DPA1-247ENST00000479107 C14orf93Q9H972 538 aaKnown RBP10.22□□□□□ -0.77
HLA-DPA1-247ENST00000479107 WWC3Q9ULE0 1092 aa10.22□□□□□ -0.77
HLA-DPA1-247ENST00000479107 ADAMTSL3P82987 1691 aa10.22□□□□□ -0.77
HLA-DPA1-247ENST00000479107 CCDC183Q5T5S1 534 aa10.22□□□□□ -0.77
HLA-DPA1-247ENST00000479107 GCP02774 474 aa10.21□□□□□ -0.77
HLA-DPA1-247ENST00000479107 NUP62CLQ9H1M0 184 aa10.21□□□□□ -0.77
HLA-DPA1-247ENST00000479107 KCNQ2O43526 872 aa10.21□□□□□ -0.77
HLA-DPA1-247ENST00000479107 EIF3JO75822 258 aaKnown RBP10.21□□□□□ -0.77
HLA-DPA1-247ENST00000479107 CDR1P51861 262 aa10.21□□□□□ -0.77
HLA-DPA1-247ENST00000479107 C9orf78Q9NZ63 289 aaPredicted RBP10.21□□□□□ -0.77
HLA-DPA1-247ENST00000479107 SPATA31A3Q5VYP0 1347 aa10.21□□□□□ -0.78
HLA-DPA1-247ENST00000479107 WDHD1O75717 1129 aaPredicted RBP10.21□□□□□ -0.78
HLA-DPA1-247ENST00000479107 GRM1Q13255 1194 aa10.21□□□□□ -0.78
HLA-DPA1-247ENST00000479107 PDILTQ8N807 584 aa10.21□□□□□ -0.78
HLA-DPA1-247ENST00000479107 GTPBP4Q9BZE4 634 aaKnown RBP10.21□□□□□ -0.78
HLA-DPA1-247ENST00000479107 ABCC3O15438 1527 aa10.2□□□□□ -0.78
HLA-DPA1-247ENST00000479107 ERLIN1O75477 346 aa10.2□□□□□ -0.78
HLA-DPA1-247ENST00000479107 UVSSAQ2YD98 709 aa10.2□□□□□ -0.78
HLA-DPA1-247ENST00000479107 TWISTNBQ3B726 338 aaPredicted RBP10.2□□□□□ -0.78
HLA-DPA1-247ENST00000479107 ARHGAP27Q6ZUM4 889 aa10.2□□□□□ -0.78
HLA-DPA1-247ENST00000479107 CCDC87Q9NVE4 849 aa10.2□□□□□ -0.78
HLA-DPA1-247ENST00000479107 USP8P40818 1118 aa10.2□□□□□ -0.78
HLA-DPA1-247ENST00000479107 DEF6Q9H4E7 631 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms