RNA–Protein interactions for RNA: ENST00000478979.5

CCDC78-210, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 3,054 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-210ENST00000478979 NOL7Q9UMY1 257 aaKnown RBP17.29■□□□□ 0.36
CCDC78-210ENST00000478979 LMOD2Q6P5Q4 547 aa17.29■□□□□ 0.36
CCDC78-210ENST00000478979 ZNF500O60304 480 aaPredicted RBP17.29■□□□□ 0.36
CCDC78-210ENST00000478979 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.29■□□□□ 0.36
CCDC78-210ENST00000478979 SMAP1Q8IYB5 467 aaPredicted RBP17.28■□□□□ 0.36
CCDC78-210ENST00000478979 K7ELQ4 463 aaPredicted RBP17.28■□□□□ 0.36
CCDC78-210ENST00000478979 HS1BP3Q53T59 392 aa17.28■□□□□ 0.36
CCDC78-210ENST00000478979 TTC22Q5TAA0 569 aa17.28■□□□□ 0.36
CCDC78-210ENST00000478979 STK31Q9BXU1 1019 aa17.28■□□□□ 0.36
CCDC78-210ENST00000478979 RTL1A6NKG5 1358 aa17.27■□□□□ 0.36
CCDC78-210ENST00000478979 BAG4O95429 457 aaKnown RBP17.27■□□□□ 0.36
CCDC78-210ENST00000478979 EIF2S2P20042 333 aaKnown RBP17.27■□□□□ 0.36
CCDC78-210ENST00000478979 SDSP20132 328 aa17.27■□□□□ 0.36
CCDC78-210ENST00000478979 RGS12O14924 1447 aa17.27■□□□□ 0.36
CCDC78-210ENST00000478979 FLT4P35916 1363 aa17.27■□□□□ 0.35
CCDC78-210ENST00000478979 GAS2L2Q8NHY3 880 aa17.27■□□□□ 0.35
CCDC78-210ENST00000478979 CEP170BQ9Y4F5 1589 aaPredicted RBP17.26■□□□□ 0.35
CCDC78-210ENST00000478979 PRDM10Q9NQV6 1147 aa17.26■□□□□ 0.35
CCDC78-210ENST00000478979 AK9Q5TCS8 1911 aa17.26■□□□□ 0.35
CCDC78-210ENST00000478979 ZNF445P59923 1031 aa17.26■□□□□ 0.35
CCDC78-210ENST00000478979 CRB1P82279 1406 aa17.25■□□□□ 0.35
CCDC78-210ENST00000478979 ATP10DQ9P241 1426 aa17.25■□□□□ 0.35
CCDC78-210ENST00000478979 NCLP19338 710 aaKnown RBP17.25■□□□□ 0.35
CCDC78-210ENST00000478979 CAVIN1Q6NZI2 390 aaKnown RBP17.25■□□□□ 0.35
CCDC78-210ENST00000478979 CLEC17AQ6ZS10 378 aa17.24■□□□□ 0.35
CCDC78-210ENST00000478979 NOL8Q76FK4 1167 aaKnown RBP17.24■□□□□ 0.35
CCDC78-210ENST00000478979 RBSNQ9H1K0 784 aa17.24■□□□□ 0.35
CCDC78-210ENST00000478979 DYNC1I1O14576 645 aa17.24■□□□□ 0.35
CCDC78-210ENST00000478979 ANXA1P04083 346 aa17.24■□□□□ 0.35
CCDC78-210ENST00000478979 HOXC9P31274 260 aa17.24■□□□□ 0.35
CCDC78-210ENST00000478979 HAP1P54257 671 aaPredicted RBP17.24■□□□□ 0.35
CCDC78-210ENST00000478979 RPAP2Q8IXW5 612 aaPredicted RBP17.24■□□□□ 0.35
CCDC78-210ENST00000478979 THEMISQ8N1K5 641 aaPredicted RBP17.24■□□□□ 0.35
CCDC78-210ENST00000478979 PDLIM2Q96JY6 352 aa17.24■□□□□ 0.35
CCDC78-210ENST00000478979 ZSCAN23Q3MJ62 389 aa17.24■□□□□ 0.35
CCDC78-210ENST00000478979 MTERF4Q7Z6M4 381 aaKnown RBP17.24■□□□□ 0.35
CCDC78-210ENST00000478979 ZHX1Q9UKY1 873 aaPredicted RBP17.24■□□□□ 0.35
CCDC78-210ENST00000478979 SBNO1A3KN83 1393 aa17.23■□□□□ 0.35
CCDC78-210ENST00000478979 FLIIQ13045 1269 aa17.23■□□□□ 0.35
CCDC78-210ENST00000478979 PTPRCP08575 1304 aa17.23■□□□□ 0.35
CCDC78-210ENST00000478979 GNAT3A8MTJ3 354 aa17.23■□□□□ 0.35
CCDC78-210ENST00000478979 FOXD4L5Q5VV16 416 aaPredicted RBP17.23■□□□□ 0.35
CCDC78-210ENST00000478979 MCTP1Q6DN14 999 aa17.23■□□□□ 0.35
CCDC78-210ENST00000478979 FOXD4L4Q8WXT5 416 aaPredicted RBP17.23■□□□□ 0.35
CCDC78-210ENST00000478979 ZKSCAN5Q9Y2L8 839 aa17.23■□□□□ 0.35
CCDC78-210ENST00000478979 IL17REQ8NFR9 667 aa17.22■□□□□ 0.35
CCDC78-210ENST00000478979 TBX22Q9Y458 520 aa17.22■□□□□ 0.35
CCDC78-210ENST00000478979 USP31Q70CQ4 1352 aa17.22■□□□□ 0.35
CCDC78-210ENST00000478979 TTC21AQ8NDW8 1320 aa17.22■□□□□ 0.35
CCDC78-210ENST00000478979 PNMA6EA0A0J9YXQ4 647 aa17.22■□□□□ 0.35
CCDC78-210ENST00000478979 PHAXQ9H814 394 aaKnown RBP17.22■□□□□ 0.35
CCDC78-210ENST00000478979 RILPL2Q969X0 211 aa17.22■□□□□ 0.35
CCDC78-210ENST00000478979 KIAA0232Q92628 1395 aa17.21■□□□□ 0.35
CCDC78-210ENST00000478979 NRKQ7Z2Y5 1582 aa17.21■□□□□ 0.35
CCDC78-210ENST00000478979 CSPP1Q1MSJ5 1256 aa17.21■□□□□ 0.35
CCDC78-210ENST00000478979 LRRC59Q96AG4 307 aaKnown RBP17.21■□□□□ 0.35
CCDC78-210ENST00000478979 IL1RAPL2Q9NP60 686 aa17.21■□□□□ 0.35
CCDC78-210ENST00000478979 ARHGEF10O15013 1369 aa17.21■□□□□ 0.34
CCDC78-210ENST00000478979 IGSF1Q8N6C5 1336 aa17.2■□□□□ 0.34
CCDC78-210ENST00000478979 TRIM6-TRIM34B2RNG4 842 aa17.2■□□□□ 0.34
CCDC78-210ENST00000478979 PRIM1P49642 420 aaKnown RBP17.2■□□□□ 0.34
CCDC78-210ENST00000478979 ESCO1Q5FWF5 840 aa17.2■□□□□ 0.34
CCDC78-210ENST00000478979 MAP4K4O95819 1239 aaPredicted RBP17.2■□□□□ 0.34
CCDC78-210ENST00000478979 LRRFIP2Q9Y608 721 aaKnown RBP17.2■□□□□ 0.34
CCDC78-210ENST00000478979 HMMRO75330 724 aa17.19■□□□□ 0.34
CCDC78-210ENST00000478979 GNAI2P04899 355 aa17.19■□□□□ 0.34
CCDC78-210ENST00000478979 SASS6Q6UVJ0 657 aa17.19■□□□□ 0.34
CCDC78-210ENST00000478979 DIP2AQ14689 1571 aa17.19■□□□□ 0.34
CCDC78-210ENST00000478979 CHAMP1Q96JM3 812 aa17.19■□□□□ 0.34
CCDC78-210ENST00000478979 USP26Q9BXU7 913 aa17.19■□□□□ 0.34
CCDC78-210ENST00000478979 LGR6Q9HBX8 967 aa17.19■□□□□ 0.34
CCDC78-210ENST00000478979 SSH2Q76I76 1423 aa17.18■□□□□ 0.34
CCDC78-210ENST00000478979 PKP1Q13835 747 aa17.18■□□□□ 0.34
CCDC78-210ENST00000478979 HDGFL1Q5TGJ6 251 aa17.18■□□□□ 0.34
CCDC78-210ENST00000478979 CASC1Q6TDU7 716 aa17.18■□□□□ 0.34
CCDC78-210ENST00000478979 LMBRD1Q9NUN5 540 aa17.18■□□□□ 0.34
CCDC78-210ENST00000478979 CCDC30Q5VVM6 783 aa17.18■□□□□ 0.34
CCDC78-210ENST00000478979 KCNQ3O43525 872 aa17.17■□□□□ 0.34
CCDC78-210ENST00000478979 CCT4P50991 539 aaKnown RBP17.17■□□□□ 0.34
CCDC78-210ENST00000478979 TOPAZ1Q8N9V7 1692 aa17.17■□□□□ 0.34
CCDC78-210ENST00000478979 PSME1Q06323 249 aa17.17■□□□□ 0.34
CCDC78-210ENST00000478979 PDE1AP54750 535 aa17.17■□□□□ 0.34
CCDC78-210ENST00000478979 PHF8Q9UPP1 1060 aa17.17■□□□□ 0.34
CCDC78-210ENST00000478979 RBM27Q9P2N5 1060 aaKnown RBP17.16■□□□□ 0.34
CCDC78-210ENST00000478979 NBPF6Q5VWK0 638 aa17.16■□□□□ 0.34
CCDC78-210ENST00000478979 MPRIPQ6WCQ1 1025 aa17.16■□□□□ 0.34
CCDC78-210ENST00000478979 ZGPATQ8N5A5 531 aaKnown RBP17.16■□□□□ 0.34
CCDC78-210ENST00000478979 NBPF4Q96M43 638 aa17.16■□□□□ 0.34
CCDC78-210ENST00000478979 CCDC94Q9BW85 323 aaPredicted RBP17.16■□□□□ 0.34
CCDC78-210ENST00000478979 MCM5P33992 734 aa17.15■□□□□ 0.34
CCDC78-210ENST00000478979 NUTM1Q86Y26 1132 aa17.15■□□□□ 0.34
CCDC78-210ENST00000478979 TAF7Q15545 349 aaPredicted RBP17.15■□□□□ 0.34
CCDC78-210ENST00000478979 DMTNQ08495 405 aa17.15■□□□□ 0.34
CCDC78-210ENST00000478979 PIK3C2AO00443 1686 aa17.14■□□□□ 0.34
CCDC78-210ENST00000478979 TPRNQ4KMQ1 711 aa17.14■□□□□ 0.33
CCDC78-210ENST00000478979 LRRCC1Q9C099 1032 aa17.14■□□□□ 0.33
CCDC78-210ENST00000478979 FMN2Q9NZ56 1722 aa17.14■□□□□ 0.33
CCDC78-210ENST00000478979 FOXD4L6Q3SYB3 417 aaPredicted RBP17.14■□□□□ 0.33
CCDC78-210ENST00000478979 FOXD4L3Q6VB84 417 aaPredicted RBP17.14■□□□□ 0.33
CCDC78-210ENST00000478979 CCDC39Q9UFE4 941 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms