RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 SMCPP49901 116 aaPredicted RBP9.41□□□□□ -0.9
CCDC171-207ENST00000478913 PTK7Q13308 1070 aa9.41□□□□□ -0.9
CCDC171-207ENST00000478913 LARGE2Q8N3Y3 721 aa9.41□□□□□ -0.9
CCDC171-207ENST00000478913 KIAA1024Q9UPX6 916 aa9.41□□□□□ -0.9
CCDC171-207ENST00000478913 RBM19Q9Y4C8 960 aaKnown RBP9.41□□□□□ -0.9
CCDC171-207ENST00000478913 GNRH1P01148 92 aa9.4□□□□□ -0.9
CCDC171-207ENST00000478913 RELBQ01201 579 aa9.4□□□□□ -0.9
CCDC171-207ENST00000478913 CCDC102BQ68D86 513 aa9.4□□□□□ -0.9
CCDC171-207ENST00000478913 TPCN2Q8NHX9 752 aa9.4□□□□□ -0.9
CCDC171-207ENST00000478913 AGBL1Q96MI9 1066 aa9.4□□□□□ -0.9
CCDC171-207ENST00000478913 UPP2O95045 317 aa9.39□□□□□ -0.91
CCDC171-207ENST00000478913 SIX5Q8N196 739 aa9.39□□□□□ -0.91
CCDC171-207ENST00000478913 TSEN34Q9BSV6 310 aaKnown RBP9.39□□□□□ -0.91
CCDC171-207ENST00000478913 ARHGEF10LQ9HCE6 1279 aa9.39□□□□□ -0.91
CCDC171-207ENST00000478913 NOVA2Q9UNW9 492 aaKnown RBP9.39□□□□□ -0.91
CCDC171-207ENST00000478913 ZBTB7BO15156 539 aaPredicted RBP9.38□□□□□ -0.91
CCDC171-207ENST00000478913 ELOAQ14241 798 aaKnown RBP9.38□□□□□ -0.91
CCDC171-207ENST00000478913 ANKMY2Q8IV38 441 aa9.38□□□□□ -0.91
CCDC171-207ENST00000478913 RAB6BQ9NRW1 208 aa9.38□□□□□ -0.91
CCDC171-207ENST00000478913 SCRIBQ14160 1630 aa9.38□□□□□ -0.91
CCDC171-207ENST00000478913 PTGIRP43119 386 aa9.37□□□□□ -0.91
CCDC171-207ENST00000478913 GDF10P55107 478 aa9.37□□□□□ -0.91
CCDC171-207ENST00000478913 DPYDQ12882 1025 aa9.37□□□□□ -0.91
CCDC171-207ENST00000478913 SUZ12Q15022 739 aaKnown RBP9.37□□□□□ -0.91
CCDC171-207ENST00000478913 ESCO1Q5FWF5 840 aa9.37□□□□□ -0.91
CCDC171-207ENST00000478913 LINC00528Q8N1L1 170 aa9.37□□□□□ -0.91
CCDC171-207ENST00000478913 STAU1O95793 577 aaKnown RBP9.36□□□□□ -0.91
CCDC171-207ENST00000478913 CSB-PGBD3P0DP91 1061 aa9.36□□□□□ -0.91
CCDC171-207ENST00000478913 SCNN1DP51172 638 aa9.36□□□□□ -0.91
CCDC171-207ENST00000478913 MRPL14Q6P1L8 145 aaKnown RBP9.36□□□□□ -0.91
CCDC171-207ENST00000478913 KDF1Q8NAX2 398 aaPredicted RBP9.36□□□□□ -0.91
CCDC171-207ENST00000478913 FAM200AQ8TCP9 573 aa9.36□□□□□ -0.91
CCDC171-207ENST00000478913 ZNF395Q9H8N7 513 aaPredicted RBP9.36□□□□□ -0.91
CCDC171-207ENST00000478913 ETNK1Q9HBU6 452 aa9.36□□□□□ -0.91
CCDC171-207ENST00000478913 ZMIZ1Q9ULJ6 1067 aa9.36□□□□□ -0.91
CCDC171-207ENST00000478913 A0A1W2PRU2 124 aa9.35□□□□□ -0.91
CCDC171-207ENST00000478913 TMEM229AB2RXF0 380 aa9.35□□□□□ -0.91
CCDC171-207ENST00000478913 BMP2P12643 396 aa9.35□□□□□ -0.91
CCDC171-207ENST00000478913 BMP1P13497 986 aa9.35□□□□□ -0.91
CCDC171-207ENST00000478913 SEC13P55735 322 aa9.35□□□□□ -0.91
CCDC171-207ENST00000478913 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.35□□□□□ -0.91
CCDC171-207ENST00000478913 STK32AQ8WU08 396 aa9.35□□□□□ -0.91
CCDC171-207ENST00000478913 ATP13A2Q9NQ11 1180 aa9.35□□□□□ -0.91
CCDC171-207ENST00000478913 SFI1A8K8P3 1242 aa9.34□□□□□ -0.91
CCDC171-207ENST00000478913 MEN1O00255 615 aa9.34□□□□□ -0.91
CCDC171-207ENST00000478913 WASLO00401 505 aaPredicted RBP9.34□□□□□ -0.91
CCDC171-207ENST00000478913 INHAP05111 366 aa9.34□□□□□ -0.91
CCDC171-207ENST00000478913 SCARF1Q14162 830 aa9.34□□□□□ -0.91
CCDC171-207ENST00000478913 C6orf118Q5T5N4 469 aa9.34□□□□□ -0.91
CCDC171-207ENST00000478913 RETREG2Q8NC44 543 aa9.34□□□□□ -0.91
CCDC171-207ENST00000478913 NLRP3Q96P20 1036 aa9.34□□□□□ -0.91
CCDC171-207ENST00000478913 ARXQ96QS3 562 aa9.34□□□□□ -0.91
CCDC171-207ENST00000478913 ZNF358Q9NW07 568 aa9.34□□□□□ -0.91
CCDC171-207ENST00000478913 BACH1O14867 736 aa9.33□□□□□ -0.92
CCDC171-207ENST00000478913 DKK1O94907 266 aa9.33□□□□□ -0.92
CCDC171-207ENST00000478913 IL2RAP01589 272 aa9.33□□□□□ -0.92
CCDC171-207ENST00000478913 CLN3Q13286 438 aa9.33□□□□□ -0.92
CCDC171-207ENST00000478913 CNKSR1Q969H4 720 aa9.33□□□□□ -0.92
CCDC171-207ENST00000478913 SERTAD1Q9UHV2 236 aa9.33□□□□□ -0.92
CCDC171-207ENST00000478913 SPINT1O43278 529 aa9.32□□□□□ -0.92
CCDC171-207ENST00000478913 TMEM164Q5U3C3 297 aa9.32□□□□□ -0.92
CCDC171-207ENST00000478913 PURBQ96QR8 312 aaKnown RBP9.32□□□□□ -0.92
CCDC171-207ENST00000478913 INSM2Q96T92 566 aaPredicted RBP9.32□□□□□ -0.92
CCDC171-207ENST00000478913 ESYT1Q9BSJ8 1104 aa9.32□□□□□ -0.92
CCDC171-207ENST00000478913 TRIM46Q7Z4K8 759 aa9.31□□□□□ -0.92
CCDC171-207ENST00000478913 XAGE2Q96GT9 111 aa9.31□□□□□ -0.92
CCDC171-207ENST00000478913 TRIM47Q96LD4 638 aa9.31□□□□□ -0.92
CCDC171-207ENST00000478913 POLMQ9NP87 494 aaPredicted RBP9.31□□□□□ -0.92
CCDC171-207ENST00000478913 USTQ9Y2C2 406 aa9.31□□□□□ -0.92
CCDC171-207ENST00000478913 PDS5BQ9NTI5 1447 aa9.31□□□□□ -0.92
CCDC171-207ENST00000478913 M0R2N6 131 aa9.3□□□□□ -0.92
CCDC171-207ENST00000478913 TLR1Q15399 786 aa9.3□□□□□ -0.92
CCDC171-207ENST00000478913 HOMEZQ8IX15 550 aa9.3□□□□□ -0.92
CCDC171-207ENST00000478913 GMPRP36959 345 aa9.29□□□□□ -0.92
CCDC171-207ENST00000478913 PDE4CQ08493 712 aa9.29□□□□□ -0.92
CCDC171-207ENST00000478913 TSEN2Q8NCE0 465 aaKnown RBP9.29□□□□□ -0.92
CCDC171-207ENST00000478913 ZFP42Q96MM3 310 aa9.29□□□□□ -0.92
CCDC171-207ENST00000478913 SLC4A9Q96Q91 983 aa9.29□□□□□ -0.92
CCDC171-207ENST00000478913 HINFPQ9BQA5 517 aa9.29□□□□□ -0.92
CCDC171-207ENST00000478913 KIF21AQ7Z4S6 1674 aa9.29□□□□□ -0.92
CCDC171-207ENST00000478913 GPC1P35052 558 aa9.28□□□□□ -0.92
CCDC171-207ENST00000478913 CTSOP43234 321 aaPredicted RBP9.28□□□□□ -0.92
CCDC171-207ENST00000478913 SMTNP53814 917 aa9.28□□□□□ -0.92
CCDC171-207ENST00000478913 SWI5Q1ZZU3 235 aa9.28□□□□□ -0.92
CCDC171-207ENST00000478913 MRC2Q9UBG0 1479 aa9.28□□□□□ -0.92
CCDC171-207ENST00000478913 A6NJY4 79 aa9.27□□□□□ -0.93
CCDC171-207ENST00000478913 TMEM88BA6NKF7 163 aa9.27□□□□□ -0.93
CCDC171-207ENST00000478913 GTF2E1P29083 439 aaPredicted RBP9.27□□□□□ -0.93
CCDC171-207ENST00000478913 CENPCQ03188 943 aa9.27□□□□□ -0.93
CCDC171-207ENST00000478913 SLC27A3Q5K4L6 730 aa9.27□□□□□ -0.93
CCDC171-207ENST00000478913 TNS4Q8IZW8 715 aa9.27□□□□□ -0.93
CCDC171-207ENST00000478913 ZSCAN10Q96SZ4 725 aaPredicted RBP9.27□□□□□ -0.93
CCDC171-207ENST00000478913 HRH3Q9Y5N1 445 aa9.27□□□□□ -0.93
CCDC171-207ENST00000478913 ADGRL1O94910 1474 aa9.27□□□□□ -0.93
CCDC171-207ENST00000478913 TTLL8A6PVC2 850 aa9.26□□□□□ -0.93
CCDC171-207ENST00000478913 RNF144AP50876 292 aaPredicted RBP9.26□□□□□ -0.93
CCDC171-207ENST00000478913 FOXD4L5Q5VV16 416 aaPredicted RBP9.26□□□□□ -0.93
CCDC171-207ENST00000478913 FHDC1Q9C0D6 1143 aaPredicted RBP9.26□□□□□ -0.93
CCDC171-207ENST00000478913 CARNS1A5YM72 827 aa9.25□□□□□ -0.93
CCDC171-207ENST00000478913 LGR5O75473 907 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms