RNA–Protein interactions for RNA: ENST00000477446.5

EPHB4-204, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 1,551 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-204ENST00000477446 ERICH6BQ5W0A0 696 aa22.05■■□□□ 1.12
EPHB4-204ENST00000477446 NFATC2IPQ8NCF5 419 aa22.05■■□□□ 1.12
EPHB4-204ENST00000477446 BCL11BQ9C0K0 894 aaPredicted RBP22.05■■□□□ 1.12
EPHB4-204ENST00000477446 SLC52A2Q9HAB3 445 aa22.05■■□□□ 1.12
EPHB4-204ENST00000477446 MRC1P22897 1456 aa22.05■■□□□ 1.12
EPHB4-204ENST00000477446 PIGBQ92521 554 aa22.04■■□□□ 1.12
EPHB4-204ENST00000477446 TMOD3Q9NYL9 352 aa22.04■■□□□ 1.12
EPHB4-204ENST00000477446 SIPA1L3O60292 1781 aaPredicted RBP22.04■■□□□ 1.12
EPHB4-204ENST00000477446 TEFQ10587 303 aa22.04■■□□□ 1.12
EPHB4-204ENST00000477446 NCBP3Q53F19 620 aaKnown RBP22.04■■□□□ 1.12
EPHB4-204ENST00000477446 BTAF1O14981 1849 aa22.03■■□□□ 1.12
EPHB4-204ENST00000477446 CCDC27Q2M243 656 aa22.03■■□□□ 1.12
EPHB4-204ENST00000477446 TNS1Q9HBL0 1735 aaKnown RBP22.03■■□□□ 1.12
EPHB4-204ENST00000477446 WWC1Q8IX03 1113 aa22.01■■□□□ 1.11
EPHB4-204ENST00000477446 NGEFQ8N5V2 710 aa22.01■■□□□ 1.11
EPHB4-204ENST00000477446 TAF7Q15545 349 aaPredicted RBP21.98■■□□□ 1.11
EPHB4-204ENST00000477446 UPF1Q92900 1129 aaKnown RBP eCLIP21.98■■□□□ 1.11
EPHB4-204ENST00000477446 APBA3O96018 575 aa21.97■■□□□ 1.11
EPHB4-204ENST00000477446 CCDC125Q86Z20 511 aa21.97■■□□□ 1.11
EPHB4-204ENST00000477446 ASAP1Q9ULH1 1129 aa21.97■■□□□ 1.11
EPHB4-204ENST00000477446 BTBD11A6QL63 1104 aa21.96■■□□□ 1.11
EPHB4-204ENST00000477446 ATG3Q9NT62 314 aa21.96■■□□□ 1.11
EPHB4-204ENST00000477446 SLC39A6Q13433 755 aa21.95■■□□□ 1.11
EPHB4-204ENST00000477446 SF3B2Q13435 895 aaKnown RBP21.95■■□□□ 1.11
EPHB4-204ENST00000477446 MIS18AQ9NYP9 233 aa21.95■■□□□ 1.11
EPHB4-204ENST00000477446 PAPPAQ13219 1627 aa21.95■■□□□ 1.1
EPHB4-204ENST00000477446 ZNF521Q96K83 1311 aa21.94■■□□□ 1.1
EPHB4-204ENST00000477446 CALD1Q05682 793 aaKnown RBP21.94■■□□□ 1.1
EPHB4-204ENST00000477446 WDR63Q8IWG1 891 aa21.93■■□□□ 1.1
EPHB4-204ENST00000477446 LAS1LQ9Y4W2 734 aaKnown RBP21.93■■□□□ 1.1
EPHB4-204ENST00000477446 KDM3BQ7LBC6 1761 aa21.92■■□□□ 1.1
EPHB4-204ENST00000477446 PLSCR1O15162 318 aa21.92■■□□□ 1.1
EPHB4-204ENST00000477446 ZNF790Q6PG37 636 aa21.92■■□□□ 1.1
EPHB4-204ENST00000477446 SMARCC1Q92922 1105 aaPredicted RBP21.92■■□□□ 1.1
EPHB4-204ENST00000477446 PALLDQ8WX93 1383 aa21.92■■□□□ 1.1
EPHB4-204ENST00000477446 LY75O60449 1722 aa21.92■■□□□ 1.1
EPHB4-204ENST00000477446 CHL1O00533 1208 aa21.91■■□□□ 1.1
EPHB4-204ENST00000477446 KCNQ3O43525 872 aa21.91■■□□□ 1.1
EPHB4-204ENST00000477446 CFAP44Q96MT7 982 aa21.91■■□□□ 1.1
EPHB4-204ENST00000477446 UBR2Q8IWV8 1755 aa21.91■■□□□ 1.1
EPHB4-204ENST00000477446 ZNF853P0CG23 659 aa21.91■■□□□ 1.1
EPHB4-204ENST00000477446 IFT57Q9NWB7 429 aa21.91■■□□□ 1.1
EPHB4-204ENST00000477446 BABAM1Q9NWV8 329 aa21.91■■□□□ 1.1
EPHB4-204ENST00000477446 TSPYL4Q9UJ04 414 aa21.91■■□□□ 1.1
EPHB4-204ENST00000477446 BAG6P46379 1132 aa21.9■■□□□ 1.1
EPHB4-204ENST00000477446 DEFB132Q7Z7B7 95 aa21.9■■□□□ 1.1
EPHB4-204ENST00000477446 TTC5Q8N0Z6 440 aa21.9■■□□□ 1.1
EPHB4-204ENST00000477446 IL16Q14005 1332 aa21.9■■□□□ 1.1
EPHB4-204ENST00000477446 RGPD3A6NKT7 1758 aaPredicted RBP21.89■■□□□ 1.1
EPHB4-204ENST00000477446 RGPD4Q7Z3J3 1758 aa21.89■■□□□ 1.1
EPHB4-204ENST00000477446 PTCD1O75127 700 aaKnown RBP21.89■■□□□ 1.09
EPHB4-204ENST00000477446 GNAI1P63096 354 aa21.89■■□□□ 1.09
EPHB4-204ENST00000477446 EN1Q05925 392 aaPredicted RBP21.89■■□□□ 1.09
EPHB4-204ENST00000477446 KCPQ6ZWJ8 1503 aa21.88■■□□□ 1.09
EPHB4-204ENST00000477446 CAMKK2Q96RR4 588 aa21.87■■□□□ 1.09
EPHB4-204ENST00000477446 RBM42Q9BTD8 480 aaKnown RBP21.87■■□□□ 1.09
EPHB4-204ENST00000477446 SPINK5Q9NQ38 1064 aaPredicted RBP21.87■■□□□ 1.09
EPHB4-204ENST00000477446 MBIPQ9NS73 344 aa21.87■■□□□ 1.09
EPHB4-204ENST00000477446 PROM2Q8N271 834 aa21.87■■□□□ 1.09
EPHB4-204ENST00000477446 ZNF496Q96IT1 587 aaPredicted RBP21.87■■□□□ 1.09
EPHB4-204ENST00000477446 LOC102724428A0A0B4J2F2 783 aa21.86■■□□□ 1.09
EPHB4-204ENST00000477446 SIK1P57059 783 aa21.86■■□□□ 1.09
EPHB4-204ENST00000477446 GOLGA2Q08379 1002 aa21.86■■□□□ 1.09
EPHB4-204ENST00000477446 EZH2Q15910 746 aaKnown RBP21.86■■□□□ 1.09
EPHB4-204ENST00000477446 SLC4A9Q96Q91 983 aa21.86■■□□□ 1.09
EPHB4-204ENST00000477446 KCNQ4P56696 695 aa21.85■■□□□ 1.09
EPHB4-204ENST00000477446 TXNRD1Q16881 649 aa21.85■■□□□ 1.09
EPHB4-204ENST00000477446 EIF4A1P60842 406 aaKnown RBP21.84■■□□□ 1.09
EPHB4-204ENST00000477446 TSR2Q969E8 191 aaKnown RBP21.84■■□□□ 1.09
EPHB4-204ENST00000477446 FMNL2Q96PY5 1086 aa21.84■■□□□ 1.09
EPHB4-204ENST00000477446 CDCA7LQ96GN5 454 aa21.83■■□□□ 1.09
EPHB4-204ENST00000477446 LRRC4BQ9NT99 713 aa21.83■■□□□ 1.09
EPHB4-204ENST00000477446 CCNL1Q9UK58 526 aaPredicted RBP21.83■■□□□ 1.09
EPHB4-204ENST00000477446 ZNF831Q5JPB2 1677 aa21.83■■□□□ 1.09
EPHB4-204ENST00000477446 ATP6V1AP38606 617 aa21.82■■□□□ 1.08
EPHB4-204ENST00000477446 SLC27A3Q5K4L6 730 aa21.82■■□□□ 1.08
EPHB4-204ENST00000477446 HEG1Q9ULI3 1381 aa21.82■■□□□ 1.08
EPHB4-204ENST00000477446 RREB1Q92766 1687 aa21.82■■□□□ 1.08
EPHB4-204ENST00000477446 VSIG10Q8N0Z9 540 aa21.82■■□□□ 1.08
EPHB4-204ENST00000477446 FANCIQ9NVI1 1328 aa21.81■■□□□ 1.08
EPHB4-204ENST00000477446 TJP1Q07157 1748 aa21.81■■□□□ 1.08
EPHB4-204ENST00000477446 SLFN5Q08AF3 891 aa21.81■■□□□ 1.08
EPHB4-204ENST00000477446 MYH16Q9H6N6 1097 aa21.81■■□□□ 1.08
EPHB4-204ENST00000477446 TAF1LQ8IZX4 1826 aa21.81■■□□□ 1.08
EPHB4-204ENST00000477446 RNF123Q5XPI4 1314 aa21.8■■□□□ 1.08
EPHB4-204ENST00000477446 E9PSI1 815 aa21.8■■□□□ 1.08
EPHB4-204ENST00000477446 ITPK1Q13572 414 aa21.8■■□□□ 1.08
EPHB4-204ENST00000477446 KRT24Q2M2I5 525 aa21.8■■□□□ 1.08
EPHB4-204ENST00000477446 CICQ96RK0 1608 aaPredicted RBP21.8■■□□□ 1.08
EPHB4-204ENST00000477446 C5P01031 1676 aa21.79■■□□□ 1.08
EPHB4-204ENST00000477446 PRAMEF22A3QJZ6 481 aa21.78■■□□□ 1.08
EPHB4-204ENST00000477446 SNRPA1P09661 255 aaKnown RBP21.78■■□□□ 1.08
EPHB4-204ENST00000477446 PPP4R2Q9NY27 417 aa21.78■■□□□ 1.08
EPHB4-204ENST00000477446 NUP188Q5SRE5 1749 aa21.78■■□□□ 1.08
EPHB4-204ENST00000477446 GIGYF1O75420 1035 aaPredicted RBP21.78■■□□□ 1.08
EPHB4-204ENST00000477446 DNAJC10Q8IXB1 793 aa21.78■■□□□ 1.08
EPHB4-204ENST00000477446 COL5A3P25940 1745 aaPredicted RBP21.77■■□□□ 1.08
EPHB4-204ENST00000477446 TRMT2AQ8IZ69 625 aaKnown RBP21.77■■□□□ 1.08
EPHB4-204ENST00000477446 C8orf58Q8NAV2 365 aa21.76■■□□□ 1.07
EPHB4-204ENST00000477446 LINC00116Q8NCU8 138 aa21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms