RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 MINDY4BA8MYZ0 360 aa21.75■■□□□ 1.07
VARS2-209ENST00000477288 POGZQ7Z3K3 1410 aa21.75■■□□□ 1.07
VARS2-209ENST00000477288 MYCNP04198 464 aaPredicted RBP21.75■■□□□ 1.07
VARS2-209ENST00000477288 KRT32Q14532 448 aa21.75■■□□□ 1.07
VARS2-209ENST00000477288 DDX11Q96FC9 970 aa21.75■■□□□ 1.07
VARS2-209ENST00000477288 CCDC102AQ96A19 550 aa21.75■■□□□ 1.07
VARS2-209ENST00000477288 UPF3BQ9BZI7 483 aaKnown RBP21.75■■□□□ 1.07
VARS2-209ENST00000477288 MKNK2Q9HBH9 465 aa21.75■■□□□ 1.07
VARS2-209ENST00000477288 FILIP1Q7Z7B0 1213 aa21.74■■□□□ 1.07
VARS2-209ENST00000477288 ZSCAN31Q96LW9 406 aaPredicted RBP21.74■■□□□ 1.07
VARS2-209ENST00000477288 CFAP45Q9UL16 551 aa21.74■■□□□ 1.07
VARS2-209ENST00000477288 ZNF287Q9HBT7 754 aa21.74■■□□□ 1.07
VARS2-209ENST00000477288 ZNF219Q9P2Y4 722 aaPredicted RBP21.74■■□□□ 1.07
VARS2-209ENST00000477288 BICRAQ9NZM4 1560 aa21.74■■□□□ 1.07
VARS2-209ENST00000477288 EPB41L2O43491 1005 aaKnown RBP21.73■■□□□ 1.07
VARS2-209ENST00000477288 ADAMTS2O95450 1211 aa21.73■■□□□ 1.07
VARS2-209ENST00000477288 WDR78Q5VTH9 848 aa21.73■■□□□ 1.07
VARS2-209ENST00000477288 WDHD1O75717 1129 aaPredicted RBP21.73■■□□□ 1.07
VARS2-209ENST00000477288 NUP62CLQ9H1M0 184 aa21.73■■□□□ 1.07
VARS2-209ENST00000477288 SUPT6HQ7KZ85 1726 aaKnown RBP21.72■■□□□ 1.07
VARS2-209ENST00000477288 KCNH5Q8NCM2 988 aa21.72■■□□□ 1.07
VARS2-209ENST00000477288 HMGB2P26583 209 aaKnown RBP21.72■■□□□ 1.07
VARS2-209ENST00000477288 AKAP2Q9Y2D5 859 aa21.72■■□□□ 1.07
VARS2-209ENST00000477288 CDK13Q14004 1512 aaKnown RBP21.72■■□□□ 1.07
VARS2-209ENST00000477288 DZIP1Q86YF9 867 aaKnown RBP21.72■■□□□ 1.07
VARS2-209ENST00000477288 NUDT16Q96DE0 195 aaKnown RBP21.72■■□□□ 1.07
VARS2-209ENST00000477288 MYD88Q99836 296 aa21.72■■□□□ 1.07
VARS2-209ENST00000477288 POTEJP0CG39 1038 aa21.71■■□□□ 1.07
VARS2-209ENST00000477288 CASTP20810 708 aaKnown RBP21.71■■□□□ 1.07
VARS2-209ENST00000477288 CEP131Q9UPN4 1083 aa21.71■■□□□ 1.07
VARS2-209ENST00000477288 IFIT1P09914 478 aaKnown RBP21.71■■□□□ 1.07
VARS2-209ENST00000477288 LAMC3Q9Y6N6 1575 aa21.71■■□□□ 1.07
VARS2-209ENST00000477288 PPP4R3AQ6IN85 833 aa21.71■■□□□ 1.07
VARS2-209ENST00000477288 PPP6R1Q9UPN7 881 aa21.71■■□□□ 1.07
VARS2-209ENST00000477288 ATAD2Q6PL18 1390 aa21.7■■□□□ 1.06
VARS2-209ENST00000477288 NAIPQ13075 1403 aa21.7■■□□□ 1.06
VARS2-209ENST00000477288 ANAPC15P60006 121 aa21.69■■□□□ 1.06
VARS2-209ENST00000477288 CCDC96Q2M329 555 aa21.69■■□□□ 1.06
VARS2-209ENST00000477288 RPGRIP1LQ68CZ1 1315 aa21.69■■□□□ 1.06
VARS2-209ENST00000477288 SMTNL1A8MU46 457 aa21.69■■□□□ 1.06
VARS2-209ENST00000477288 PPP1R12BO60237 982 aaPredicted RBP21.69■■□□□ 1.06
VARS2-209ENST00000477288 CAMK4Q16566 473 aa21.69■■□□□ 1.06
VARS2-209ENST00000477288 MCM10Q7L590 875 aa21.69■■□□□ 1.06
VARS2-209ENST00000477288 CCDC113Q9H0I3 377 aa21.69■■□□□ 1.06
VARS2-209ENST00000477288 ANKRD30BQ9BXX2 1392 aa21.69■■□□□ 1.06
VARS2-209ENST00000477288 NFE2L2Q16236 605 aa21.69■■□□□ 1.06
VARS2-209ENST00000477288 USHBP1Q8N6Y0 703 aa21.69■■□□□ 1.06
VARS2-209ENST00000477288 ZNF397Q8NF99 534 aaPredicted RBP21.69■■□□□ 1.06
VARS2-209ENST00000477288 EXOC6BQ9Y2D4 811 aa21.69■■□□□ 1.06
VARS2-209ENST00000477288 IQGAP2Q13576 1575 aa21.69■■□□□ 1.06
VARS2-209ENST00000477288 FCHSD2O94868 740 aa21.69■■□□□ 1.06
VARS2-209ENST00000477288 ARHGAP29Q52LW3 1261 aa21.69■■□□□ 1.06
VARS2-209ENST00000477288 MPRIPQ6WCQ1 1025 aa21.69■■□□□ 1.06
VARS2-209ENST00000477288 UQCRHLA0A096LP55 91 aa21.68■■□□□ 1.06
VARS2-209ENST00000477288 UQCRHP07919 91 aa21.68■■□□□ 1.06
VARS2-209ENST00000477288 CFAP100Q494V2 611 aa21.68■■□□□ 1.06
VARS2-209ENST00000477288 UBA5Q9GZZ9 404 aa21.68■■□□□ 1.06
VARS2-209ENST00000477288 GRPEL1Q9HAV7 217 aa21.68■■□□□ 1.06
VARS2-209ENST00000477288 RPGRQ92834 1020 aaKnown RBP21.68■■□□□ 1.06
VARS2-209ENST00000477288 DUSP27Q5VZP5 1158 aa21.67■■□□□ 1.06
VARS2-209ENST00000477288 CCDC148Q8NFR7 591 aa21.67■■□□□ 1.06
VARS2-209ENST00000477288 DNAI2Q9GZS0 605 aa21.67■■□□□ 1.06
VARS2-209ENST00000477288 NAPBQ9H115 298 aa21.66■■□□□ 1.06
VARS2-209ENST00000477288 ERICH4A6NGS2 130 aa21.66■■□□□ 1.06
VARS2-209ENST00000477288 CCDC91Q7Z6B0 441 aa21.66■■□□□ 1.06
VARS2-209ENST00000477288 RPAP2Q8IXW5 612 aaPredicted RBP21.65■■□□□ 1.06
VARS2-209ENST00000477288 DYDC1Q8WWB3 177 aa21.65■■□□□ 1.06
VARS2-209ENST00000477288 DNAJC5BQ9UF47 199 aa21.65■■□□□ 1.06
VARS2-209ENST00000477288 U3KPZ7 1027 aaPredicted RBP21.65■■□□□ 1.06
VARS2-209ENST00000477288 CETN2P41208 172 aa21.65■■□□□ 1.06
VARS2-209ENST00000477288 LARP1Q6PKG0 1096 aaKnown RBP21.65■■□□□ 1.06
VARS2-209ENST00000477288 BOLA2Q9H3K6 86 aa21.65■■□□□ 1.06
VARS2-209ENST00000477288 ZNF444Q8N0Y2 327 aaPredicted RBP21.65■■□□□ 1.06
VARS2-209ENST00000477288 RANBP6O60518 1105 aaKnown RBP21.64■■□□□ 1.06
VARS2-209ENST00000477288 TRMT112Q9UI30 125 aaKnown RBP21.64■■□□□ 1.06
VARS2-209ENST00000477288 SPDYE4A6NLX3 237 aa21.64■■□□□ 1.06
VARS2-209ENST00000477288 THUMPD2Q9BTF0 503 aaKnown RBP21.64■■□□□ 1.06
VARS2-209ENST00000477288 INCENPQ9NQS7 918 aa21.64■■□□□ 1.06
VARS2-209ENST00000477288 CUL5Q93034 780 aa21.64■■□□□ 1.05
VARS2-209ENST00000477288 KLHL10Q6JEL2 608 aa21.64■■□□□ 1.05
VARS2-209ENST00000477288 MAP2K1Q02750 393 aaPredicted RBP21.64■■□□□ 1.05
VARS2-209ENST00000477288 KIF1BPQ96EK5 621 aa21.64■■□□□ 1.05
VARS2-209ENST00000477288 MAGI1Q96QZ7 1491 aaPredicted RBP21.64■■□□□ 1.05
VARS2-209ENST00000477288 GOLGA6L10A0A0M3HER8 536 aa21.63■■□□□ 1.05
VARS2-209ENST00000477288 SPA17Q15506 151 aa21.63■■□□□ 1.05
VARS2-209ENST00000477288 IFIT5Q13325 482 aaKnown RBP21.63■■□□□ 1.05
VARS2-209ENST00000477288 TMEM57Q8N5G2 664 aa21.63■■□□□ 1.05
VARS2-209ENST00000477288 TMEM87AQ8NBN3 555 aa21.63■■□□□ 1.05
VARS2-209ENST00000477288 PRPF40BQ6NWY9 871 aaKnown RBP21.63■■□□□ 1.05
VARS2-209ENST00000477288 NSD3Q9BZ95 1437 aa21.63■■□□□ 1.05
VARS2-209ENST00000477288 WAPLQ7Z5K2 1190 aa21.63■■□□□ 1.05
VARS2-209ENST00000477288 AKNAQ7Z591 1439 aa21.63■■□□□ 1.05
VARS2-209ENST00000477288 SLC5A1P13866 664 aa21.63■■□□□ 1.05
VARS2-209ENST00000477288 CCDC61Q9Y6R9 512 aa21.63■■□□□ 1.05
VARS2-209ENST00000477288 LIG1P18858 919 aa21.62■■□□□ 1.05
VARS2-209ENST00000477288 DNA2P51530 1060 aa21.62■■□□□ 1.05
VARS2-209ENST00000477288 SMARCA5O60264 1052 aaPredicted RBP21.62■■□□□ 1.05
VARS2-209ENST00000477288 TMPOP42166 694 aaKnown RBP21.62■■□□□ 1.05
VARS2-209ENST00000477288 CCDC83Q8IWF9 413 aa21.62■■□□□ 1.05
VARS2-209ENST00000477288 TSG101Q99816 390 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms