RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 RTL1A6NKG5 1358 aa10.32□□□□□ -0.76
VAPB-205ENST00000476395 PRIM1P49642 420 aaKnown RBP10.32□□□□□ -0.76
VAPB-205ENST00000476395 GNAI1P63096 354 aa10.32□□□□□ -0.76
VAPB-205ENST00000476395 NWD1Q149M9 1564 aa10.32□□□□□ -0.76
VAPB-205ENST00000476395 ROBO2Q9HCK4 1378 aa10.32□□□□□ -0.76
VAPB-205ENST00000476395 K7ELQ4 463 aaPredicted RBP10.32□□□□□ -0.76
VAPB-205ENST00000476395 GBP4Q96PP9 640 aa10.32□□□□□ -0.76
VAPB-205ENST00000476395 CIZ1Q9ULV3 898 aaPredicted RBP10.32□□□□□ -0.76
VAPB-205ENST00000476395 ADAMTS13Q76LX8 1427 aa10.32□□□□□ -0.76
VAPB-205ENST00000476395 DMTNQ08495 405 aa10.31□□□□□ -0.76
VAPB-205ENST00000476395 TTC22Q5TAA0 569 aa10.31□□□□□ -0.76
VAPB-205ENST00000476395 C17orf53Q8N3J3 647 aaPredicted RBP10.31□□□□□ -0.76
VAPB-205ENST00000476395 USP26Q9BXU7 913 aa10.31□□□□□ -0.76
VAPB-205ENST00000476395 ZDHHC9Q9Y397 364 aa10.31□□□□□ -0.76
VAPB-205ENST00000476395 PIK3C2AO00443 1686 aa10.31□□□□□ -0.76
VAPB-205ENST00000476395 EIF4A2Q14240 407 aaKnown RBP10.31□□□□□ -0.76
VAPB-205ENST00000476395 MCTP1Q6DN14 999 aa10.31□□□□□ -0.76
VAPB-205ENST00000476395 RNF214Q8ND24 703 aa10.31□□□□□ -0.76
VAPB-205ENST00000476395 ISY1Q9ULR0 285 aaKnown RBP10.31□□□□□ -0.76
VAPB-205ENST00000476395 NOL7Q9UMY1 257 aaKnown RBP10.31□□□□□ -0.76
VAPB-205ENST00000476395 CEP170BQ9Y4F5 1589 aaPredicted RBP10.31□□□□□ -0.76
VAPB-205ENST00000476395 CHL1O00533 1208 aa10.31□□□□□ -0.76
VAPB-205ENST00000476395 CEP85Q6P2H3 762 aa10.31□□□□□ -0.76
VAPB-205ENST00000476395 ZNF710Q8N1W2 664 aa10.31□□□□□ -0.76
VAPB-205ENST00000476395 ESF1Q9H501 851 aaKnown RBP10.31□□□□□ -0.76
VAPB-205ENST00000476395 SALL3Q9BXA9 1300 aa10.31□□□□□ -0.76
VAPB-205ENST00000476395 SPDYE4A6NLX3 237 aa10.3□□□□□ -0.76
VAPB-205ENST00000476395 ATP2B3Q16720 1220 aa10.3□□□□□ -0.76
VAPB-205ENST00000476395 SECISBP2LQ93073 1101 aaKnown RBP10.3□□□□□ -0.76
VAPB-205ENST00000476395 NUDT16Q96DE0 195 aaKnown RBP10.3□□□□□ -0.76
VAPB-205ENST00000476395 ANKRD44Q8N8A2 993 aa10.3□□□□□ -0.76
VAPB-205ENST00000476395 BAG4O95429 457 aaKnown RBP10.3□□□□□ -0.76
VAPB-205ENST00000476395 ZSCAN23Q3MJ62 389 aa10.3□□□□□ -0.76
VAPB-205ENST00000476395 TXNDC2Q86VQ3 553 aa10.3□□□□□ -0.76
VAPB-205ENST00000476395 ANP32BQ92688 251 aaKnown RBP10.3□□□□□ -0.76
VAPB-205ENST00000476395 NSFL1CQ9UNZ2 370 aaKnown RBP10.3□□□□□ -0.76
VAPB-205ENST00000476395 ZNF830Q96NB3 372 aaPredicted RBP10.29□□□□□ -0.76
VAPB-205ENST00000476395 USP31Q70CQ4 1352 aa10.29□□□□□ -0.76
VAPB-205ENST00000476395 PTPRUQ92729 1446 aa10.29□□□□□ -0.76
VAPB-205ENST00000476395 PPP4R3BQ5MIZ7 849 aa10.29□□□□□ -0.76
VAPB-205ENST00000476395 FOXD4L5Q5VV16 416 aaPredicted RBP10.29□□□□□ -0.76
VAPB-205ENST00000476395 FOXD4L4Q8WXT5 416 aaPredicted RBP10.29□□□□□ -0.76
VAPB-205ENST00000476395 USP54Q70EL1 1684 aa10.29□□□□□ -0.76
VAPB-205ENST00000476395 CRYBG1Q9Y4K1 1723 aa10.29□□□□□ -0.76
VAPB-205ENST00000476395 KIAA0232Q92628 1395 aa10.29□□□□□ -0.76
VAPB-205ENST00000476395 SMARCA5O60264 1052 aaPredicted RBP10.29□□□□□ -0.76
VAPB-205ENST00000476395 ZNF500O60304 480 aaPredicted RBP10.29□□□□□ -0.76
VAPB-205ENST00000476395 MAP7D2Q96T17 732 aa10.28□□□□□ -0.76
VAPB-205ENST00000476395 MEIS3Q99687 375 aa10.28□□□□□ -0.76
VAPB-205ENST00000476395 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.28□□□□□ -0.76
VAPB-205ENST00000476395 CDC45O75419 566 aa10.28□□□□□ -0.76
VAPB-205ENST00000476395 SDSP20132 328 aa10.28□□□□□ -0.76
VAPB-205ENST00000476395 MCM10Q7L590 875 aa10.28□□□□□ -0.76
VAPB-205ENST00000476395 CCDC94Q9BW85 323 aaPredicted RBP10.28□□□□□ -0.76
VAPB-205ENST00000476395 IBTKQ9P2D0 1353 aaPredicted RBP10.28□□□□□ -0.76
VAPB-205ENST00000476395 ZNF592Q92610 1267 aa10.27□□□□□ -0.76
VAPB-205ENST00000476395 ZKSCAN5Q9Y2L8 839 aa10.27□□□□□ -0.76
VAPB-205ENST00000476395 DYNC1I1O14576 645 aa10.27□□□□□ -0.77
VAPB-205ENST00000476395 KLHL40Q2TBA0 621 aa10.27□□□□□ -0.77
VAPB-205ENST00000476395 TEX2Q8IWB9 1127 aa10.27□□□□□ -0.77
VAPB-205ENST00000476395 PLCD3Q8N3E9 789 aa10.27□□□□□ -0.77
VAPB-205ENST00000476395 USP6P35125 1406 aa10.27□□□□□ -0.77
VAPB-205ENST00000476395 G2E3Q7L622 706 aa10.27□□□□□ -0.77
VAPB-205ENST00000476395 SIRT1Q96EB6 747 aa10.27□□□□□ -0.77
VAPB-205ENST00000476395 ZGPATQ8N5A5 531 aaKnown RBP10.26□□□□□ -0.77
VAPB-205ENST00000476395 PDLIM2Q96JY6 352 aa10.26□□□□□ -0.77
VAPB-205ENST00000476395 LMBRD1Q9NUN5 540 aa10.26□□□□□ -0.77
VAPB-205ENST00000476395 FOXO3O43524 673 aa10.26□□□□□ -0.77
VAPB-205ENST00000476395 TERF1P54274 439 aa10.26□□□□□ -0.77
VAPB-205ENST00000476395 SKOR2Q2VWA4 1001 aaPredicted RBP10.26□□□□□ -0.77
VAPB-205ENST00000476395 GPT2Q8TD30 523 aa10.26□□□□□ -0.77
VAPB-205ENST00000476395 SYCE3A1L190 88 aa10.26□□□□□ -0.77
VAPB-205ENST00000476395 HSP90AB2PQ58FF8 381 aa10.26□□□□□ -0.77
VAPB-205ENST00000476395 API5Q9BZZ5 524 aaKnown RBP10.26□□□□□ -0.77
VAPB-205ENST00000476395 CCDC61Q9Y6R9 512 aa10.26□□□□□ -0.77
VAPB-205ENST00000476395 KDRP35968 1356 aa10.26□□□□□ -0.77
VAPB-205ENST00000476395 SASS6Q6UVJ0 657 aa10.25□□□□□ -0.77
VAPB-205ENST00000476395 IL25Q9H293 177 aa10.25□□□□□ -0.77
VAPB-205ENST00000476395 MAP3K19Q56UN5 1328 aa10.25□□□□□ -0.77
VAPB-205ENST00000476395 TTC21BQ7Z4L5 1316 aa10.25□□□□□ -0.77
VAPB-205ENST00000476395 PRPF40AO75400 957 aaKnown RBP10.25□□□□□ -0.77
VAPB-205ENST00000476395 DNTTIP2Q5QJE6 756 aaKnown RBP10.25□□□□□ -0.77
VAPB-205ENST00000476395 SULT6B1Q6IMI4 303 aa10.25□□□□□ -0.77
VAPB-205ENST00000476395 TMEM51Q9NW97 253 aa10.25□□□□□ -0.77
VAPB-205ENST00000476395 MIS18AQ9NYP9 233 aa10.24□□□□□ -0.77
VAPB-205ENST00000476395 STAG3Q9UJ98 1225 aa10.24□□□□□ -0.77
VAPB-205ENST00000476395 CEBPAP49715 358 aaPredicted RBP10.24□□□□□ -0.77
VAPB-205ENST00000476395 COG3Q96JB2 828 aa10.24□□□□□ -0.77
VAPB-205ENST00000476395 OSBPL3Q9H4L5 887 aa10.24□□□□□ -0.77
VAPB-205ENST00000476395 TMEM63CQ9P1W3 806 aa10.24□□□□□ -0.77
VAPB-205ENST00000476395 TICAM2Q86XR7 235 aa10.23□□□□□ -0.77
VAPB-205ENST00000476395 CACNA1FO60840 1977 aa10.23□□□□□ -0.77
VAPB-205ENST00000476395 ZNF445P59923 1031 aa10.23□□□□□ -0.77
VAPB-205ENST00000476395 UTP14CQ5TAP6 766 aaKnown RBP10.23□□□□□ -0.77
VAPB-205ENST00000476395 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.23□□□□□ -0.77
VAPB-205ENST00000476395 ACEP12821 1306 aa10.23□□□□□ -0.77
VAPB-205ENST00000476395 FOXD4L6Q3SYB3 417 aaPredicted RBP10.23□□□□□ -0.77
VAPB-205ENST00000476395 FOXD4L3Q6VB84 417 aaPredicted RBP10.23□□□□□ -0.77
VAPB-205ENST00000476395 IL17RAQ96F46 866 aa10.23□□□□□ -0.77
VAPB-205ENST00000476395 MED1Q15648 1581 aaPredicted RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms