RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 TMPOP42166 694 aaKnown RBP38.98■■■■□ 3.83
HOXB3-208ENST00000476342 TEFQ10587 303 aa38.98■■■■□ 3.83
HOXB3-208ENST00000476342 PALLDQ8WX93 1383 aa38.98■■■■□ 3.83
HOXB3-208ENST00000476342 TXNRD1Q16881 649 aa38.97■■■■□ 3.83
HOXB3-208ENST00000476342 RIPK4P57078 832 aa38.97■■■■□ 3.83
HOXB3-208ENST00000476342 NUP188Q5SRE5 1749 aa38.95■■■■□ 3.83
HOXB3-208ENST00000476342 MCM10Q7L590 875 aa38.95■■■■□ 3.83
HOXB3-208ENST00000476342 LMOD3Q0VAK6 560 aa38.94■■■■□ 3.82
HOXB3-208ENST00000476342 FAM9BQ8IZU0 186 aa38.94■■■■□ 3.82
HOXB3-208ENST00000476342 ASAP1Q9ULH1 1129 aa38.94■■■■□ 3.82
HOXB3-208ENST00000476342 SIPA1L3O60292 1781 aaPredicted RBP38.93■■■■□ 3.82
HOXB3-208ENST00000476342 SLC27A3Q5K4L6 730 aa38.92■■■■□ 3.82
HOXB3-208ENST00000476342 MIER1Q8N108 512 aa38.92■■■■□ 3.82
HOXB3-208ENST00000476342 PROM2Q8N271 834 aa38.92■■■■□ 3.82
HOXB3-208ENST00000476342 ATG3Q9NT62 314 aa38.92■■■■□ 3.82
HOXB3-208ENST00000476342 DCTN1Q14203 1278 aa38.91■■■■□ 3.82
HOXB3-208ENST00000476342 RRP7AQ9Y3A4 280 aaKnown RBP38.91■■■■□ 3.82
HOXB3-208ENST00000476342 NEUROD2Q15784 382 aa38.9■■■■□ 3.82
HOXB3-208ENST00000476342 APAF1O14727 1248 aa38.89■■■■□ 3.82
HOXB3-208ENST00000476342 CCNL1Q9UK58 526 aaPredicted RBP38.89■■■■□ 3.82
HOXB3-208ENST00000476342 PAPPAQ13219 1627 aa38.89■■■■□ 3.82
HOXB3-208ENST00000476342 HMGB2P26583 209 aaKnown RBP38.84■■■■□ 3.81
HOXB3-208ENST00000476342 LOC102724428A0A0B4J2F2 783 aa38.83■■■■□ 3.81
HOXB3-208ENST00000476342 SIK1P57059 783 aa38.83■■■■□ 3.81
HOXB3-208ENST00000476342 LRRC4BQ9NT99 713 aa38.83■■■■□ 3.81
HOXB3-208ENST00000476342 NBPF14Q5TI25 921 aa38.82■■■■□ 3.81
HOXB3-208ENST00000476342 BTBD11A6QL63 1104 aa38.8■■■■□ 3.8
HOXB3-208ENST00000476342 SLC39A6Q13433 755 aa38.8■■■■□ 3.8
HOXB3-208ENST00000476342 TTC5Q8N0Z6 440 aa38.8■■■■□ 3.8
HOXB3-208ENST00000476342 RBM42Q9BTD8 480 aaKnown RBP38.8■■■■□ 3.8
HOXB3-208ENST00000476342 ZNF831Q5JPB2 1677 aa38.8■■■■□ 3.8
HOXB3-208ENST00000476342 THUMPD2Q9BTF0 503 aaKnown RBP38.8■■■■□ 3.8
HOXB3-208ENST00000476342 C5P01031 1676 aa38.79■■■■□ 3.8
HOXB3-208ENST00000476342 TAF7Q15545 349 aaPredicted RBP38.79■■■■□ 3.8
HOXB3-208ENST00000476342 TRIM35Q9UPQ4 493 aa38.79■■■■□ 3.8
HOXB3-208ENST00000476342 TAF1LQ8IZX4 1826 aa38.78■■■■□ 3.8
HOXB3-208ENST00000476342 UBR2Q8IWV8 1755 aa38.78■■■■□ 3.8
HOXB3-208ENST00000476342 KCNQ4P56696 695 aa38.78■■■■□ 3.8
HOXB3-208ENST00000476342 PTCD1O75127 700 aaKnown RBP38.77■■■■□ 3.8
HOXB3-208ENST00000476342 ZNF790Q6PG37 636 aa38.77■■■■□ 3.8
HOXB3-208ENST00000476342 ATP6V1AP38606 617 aa38.76■■■■□ 3.8
HOXB3-208ENST00000476342 KCPQ6ZWJ8 1503 aa38.74■■■■□ 3.79
HOXB3-208ENST00000476342 STK32BQ9NY57 414 aa38.72■■■■□ 3.79
HOXB3-208ENST00000476342 CICQ96RK0 1608 aaPredicted RBP38.71■■■■□ 3.79
HOXB3-208ENST00000476342 NCBP3Q53F19 620 aaKnown RBP38.71■■■■□ 3.79
HOXB3-208ENST00000476342 ANO8Q9HCE9 1232 aaPredicted RBP38.71■■■■□ 3.79
HOXB3-208ENST00000476342 SLC4A9Q96Q91 983 aa38.7■■■■□ 3.79
HOXB3-208ENST00000476342 KDM3BQ7LBC6 1761 aa38.7■■■■□ 3.79
HOXB3-208ENST00000476342 CCDC27Q2M243 656 aa38.68■■■■□ 3.78
HOXB3-208ENST00000476342 C4BP0C0L5 1744 aa38.67■■■■□ 3.78
HOXB3-208ENST00000476342 CALD1Q05682 793 aaKnown RBP38.67■■■■□ 3.78
HOXB3-208ENST00000476342 ITPK1Q13572 414 aa38.67■■■■□ 3.78
HOXB3-208ENST00000476342 SLC15A2Q16348 729 aa38.67■■■■□ 3.78
HOXB3-208ENST00000476342 VSIG10Q8N0Z9 540 aa38.67■■■■□ 3.78
HOXB3-208ENST00000476342 FMNL2Q96PY5 1086 aa38.67■■■■□ 3.78
HOXB3-208ENST00000476342 TJP1Q07157 1748 aa38.67■■■■□ 3.78
HOXB3-208ENST00000476342 BABAM1Q9NWV8 329 aa38.66■■■■□ 3.78
HOXB3-208ENST00000476342 COL5A3P25940 1745 aaPredicted RBP38.66■■■■□ 3.78
HOXB3-208ENST00000476342 NGEFQ8N5V2 710 aa38.65■■■■□ 3.78
HOXB3-208ENST00000476342 ZNF496Q96IT1 587 aaPredicted RBP38.65■■■■□ 3.78
HOXB3-208ENST00000476342 MIS18AQ9NYP9 233 aa38.65■■■■□ 3.78
HOXB3-208ENST00000476342 SENP3-EIF4A1A0A087X0R7 540 aa38.64■■■■□ 3.78
HOXB3-208ENST00000476342 KCNQ3O43525 872 aa38.64■■■■□ 3.78
HOXB3-208ENST00000476342 R3HDM1Q15032 1099 aaKnown RBP38.64■■■■□ 3.78
HOXB3-208ENST00000476342 LINC00116Q8NCU8 138 aa38.64■■■■□ 3.78
HOXB3-208ENST00000476342 AKT1S1Q96B36 256 aa38.64■■■■□ 3.78
HOXB3-208ENST00000476342 ZNF827Q17R98 1081 aa38.63■■■■□ 3.78
HOXB3-208ENST00000476342 TSPYL4Q9UJ04 414 aa38.63■■■■□ 3.78
HOXB3-208ENST00000476342 HEG1Q9ULI3 1381 aa38.63■■■■□ 3.77
HOXB3-208ENST00000476342 PSDA5PKW4 1024 aaPredicted RBP38.6■■■■□ 3.77
HOXB3-208ENST00000476342 WWC1Q8IX03 1113 aa38.6■■■■□ 3.77
HOXB3-208ENST00000476342 AK7Q96M32 723 aa38.6■■■■□ 3.77
HOXB3-208ENST00000476342 LAS1LQ9Y4W2 734 aaKnown RBP38.6■■■■□ 3.77
HOXB3-208ENST00000476342 QSER1Q2KHR3 1735 aa38.6■■■■□ 3.77
HOXB3-208ENST00000476342 TFCP2L1Q9NZI6 479 aa38.59■■■■□ 3.77
HOXB3-208ENST00000476342 SALL2Q9Y467 1007 aaPredicted RBP38.59■■■■□ 3.77
HOXB3-208ENST00000476342 DNAJC10Q8IXB1 793 aa38.58■■■■□ 3.77
HOXB3-208ENST00000476342 CFAP44Q96MT7 982 aa38.58■■■■□ 3.77
HOXB3-208ENST00000476342 TEX13AQ9BXU3 409 aaPredicted RBP38.57■■■■□ 3.77
HOXB3-208ENST00000476342 TUBGCP6Q96RT7 1819 aa38.57■■■■□ 3.76
HOXB3-208ENST00000476342 CHL1O00533 1208 aa38.56■■■■□ 3.76
HOXB3-208ENST00000476342 CNTNAP4Q9C0A0 1308 aa38.56■■■■□ 3.76
HOXB3-208ENST00000476342 IFT57Q9NWB7 429 aa38.55■■■■□ 3.76
HOXB3-208ENST00000476342 GNAI1P63096 354 aa38.55■■■■□ 3.76
HOXB3-208ENST00000476342 RC3H1Q5TC82 1133 aaKnown RBP38.55■■■■□ 3.76
HOXB3-208ENST00000476342 UBR3Q6ZT12 1888 aa38.53■■■■□ 3.76
HOXB3-208ENST00000476342 SNRPA1P09661 255 aaKnown RBP38.53■■■■□ 3.76
HOXB3-208ENST00000476342 EIF4A1P60842 406 aaKnown RBP38.53■■■■□ 3.76
HOXB3-208ENST00000476342 STARD3NLO95772 234 aa38.52■■■■□ 3.76
HOXB3-208ENST00000476342 MYH14Q7Z406 1995 aaKnown RBP38.52■■■■□ 3.76
HOXB3-208ENST00000476342 CRKLP46109 303 aaKnown RBP38.51■■■■□ 3.76
HOXB3-208ENST00000476342 GNPATO15228 680 aa38.5■■■■□ 3.75
HOXB3-208ENST00000476342 ZNF853P0CG23 659 aa38.5■■■■□ 3.75
HOXB3-208ENST00000476342 CYP19A1P11511 503 aaPredicted RBP38.5■■■■□ 3.75
HOXB3-208ENST00000476342 IL16Q14005 1332 aa38.49■■■■□ 3.75
HOXB3-208ENST00000476342 WDR63Q8IWG1 891 aa38.48■■■■□ 3.75
HOXB3-208ENST00000476342 FLAD1Q8NFF5 587 aa38.48■■■■□ 3.75
HOXB3-208ENST00000476342 PNPLA7Q6ZV29 1317 aa38.48■■■■□ 3.75
HOXB3-208ENST00000476342 LAMB4A4D0S4 1761 aa38.47■■■■□ 3.75
HOXB3-208ENST00000476342 CASZ1Q86V15 1759 aa38.47■■■■□ 3.75
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms