RNA–Protein interactions for RNA: ENST00000474926.5

PHTF1-209, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 2

Gene PHTF1, Length 4,314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-209ENST00000474926 ARHGAP31Q2M1Z3 1444 aa9.02□□□□□ -0.97
PHTF1-209ENST00000474926 NPHP3Q7Z494 1330 aa9.02□□□□□ -0.97
PHTF1-209ENST00000474926 CHL1O00533 1208 aa9.01□□□□□ -0.97
PHTF1-209ENST00000474926 MSNP26038 577 aaKnown RBP9.01□□□□□ -0.97
PHTF1-209ENST00000474926 LRRFIP1Q32MZ4 808 aaKnown RBP9.01□□□□□ -0.97
PHTF1-209ENST00000474926 AKAP4Q5JQC9 854 aa9.01□□□□□ -0.97
PHTF1-209ENST00000474926 UPF3BQ9BZI7 483 aaKnown RBP9.01□□□□□ -0.97
PHTF1-209ENST00000474926 PHAXQ9H814 394 aaKnown RBP9.01□□□□□ -0.97
PHTF1-209ENST00000474926 LGR6Q9HBX8 967 aa9.01□□□□□ -0.97
PHTF1-209ENST00000474926 MAP3K4Q9Y6R4 1608 aa9.01□□□□□ -0.97
PHTF1-209ENST00000474926 DRC7Q8IY82 874 aa9.01□□□□□ -0.97
PHTF1-209ENST00000474926 SMC5Q8IY18 1101 aa9.01□□□□□ -0.97
PHTF1-209ENST00000474926 ZBTB3Q9H5J0 574 aa9.01□□□□□ -0.97
PHTF1-209ENST00000474926 HYPKQ9NX55 129 aa9.01□□□□□ -0.97
PHTF1-209ENST00000474926 NBPF6Q5VWK0 638 aa9.01□□□□□ -0.97
PHTF1-209ENST00000474926 NFATC2IPQ8NCF5 419 aa9.01□□□□□ -0.97
PHTF1-209ENST00000474926 NBPF4Q96M43 638 aa9.01□□□□□ -0.97
PHTF1-209ENST00000474926 TBC1D32Q96NH3 1257 aa9.01□□□□□ -0.97
PHTF1-209ENST00000474926 FMNL2Q96PY5 1086 aa9.01□□□□□ -0.97
PHTF1-209ENST00000474926 BOLA2Q9H3K6 86 aa9.01□□□□□ -0.97
PHTF1-209ENST00000474926 TMOD3Q9NYL9 352 aa9.01□□□□□ -0.97
PHTF1-209ENST00000474926 SBNO1A3KN83 1393 aa9□□□□□ -0.97
PHTF1-209ENST00000474926 MSH6P52701 1360 aa9□□□□□ -0.97
PHTF1-209ENST00000474926 PIK3R4Q99570 1358 aa9□□□□□ -0.97
PHTF1-209ENST00000474926 HTATSF1O43719 755 aaKnown RBP9□□□□□ -0.97
PHTF1-209ENST00000474926 VPS37DQ86XT2 251 aa9□□□□□ -0.97
PHTF1-209ENST00000474926 A0A087WZG4 1122 aa9□□□□□ -0.97
PHTF1-209ENST00000474926 CCDC57Q2TAC2 916 aa9□□□□□ -0.97
PHTF1-209ENST00000474926 CNNM1Q9NRU3 951 aa9□□□□□ -0.97
PHTF1-209ENST00000474926 ATP6V1DQ9Y5K8 247 aa9□□□□□ -0.97
PHTF1-209ENST00000474926 SPHKAPQ2M3C7 1700 aa9□□□□□ -0.97
PHTF1-209ENST00000474926 DNAJC5Q9H3Z4 198 aa8.99□□□□□ -0.97
PHTF1-209ENST00000474926 MAP3K5Q99683 1374 aa8.99□□□□□ -0.97
PHTF1-209ENST00000474926 RAB11FIP3O75154 756 aa8.99□□□□□ -0.97
PHTF1-209ENST00000474926 SF3A1Q15459 793 aaKnown RBP8.99□□□□□ -0.97
PHTF1-209ENST00000474926 CSPP1Q1MSJ5 1256 aa8.99□□□□□ -0.97
PHTF1-209ENST00000474926 CEP85Q6P2H3 762 aa8.99□□□□□ -0.97
PHTF1-209ENST00000474926 COPS6Q7L5N1 327 aa8.99□□□□□ -0.97
PHTF1-209ENST00000474926 KIF3AQ9Y496 699 aa8.99□□□□□ -0.97
PHTF1-209ENST00000474926 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.99□□□□□ -0.97
PHTF1-209ENST00000474926 FKBP4Q02790 459 aaKnown RBP eCLIP8.99□□□□□ -0.97
PHTF1-209ENST00000474926 TTC22Q5TAA0 569 aa8.99□□□□□ -0.97
PHTF1-209ENST00000474926 UBE3BQ7Z3V4 1068 aa8.99□□□□□ -0.97
PHTF1-209ENST00000474926 SDSP20132 328 aa8.99□□□□□ -0.97
PHTF1-209ENST00000474926 XAGE3Q8WTP9 111 aa8.99□□□□□ -0.97
PHTF1-209ENST00000474926 CEP126Q9P2H0 1117 aa8.99□□□□□ -0.97
PHTF1-209ENST00000474926 MADDQ8WXG6 1647 aa8.98□□□□□ -0.97
PHTF1-209ENST00000474926 A2ML1A8K2U0 1454 aa8.98□□□□□ -0.97
PHTF1-209ENST00000474926 PLEKHG1Q9ULL1 1385 aa8.98□□□□□ -0.97
PHTF1-209ENST00000474926 PRPF40AO75400 957 aaKnown RBP8.98□□□□□ -0.97
PHTF1-209ENST00000474926 GLRX3O76003 335 aaKnown RBP8.98□□□□□ -0.97
PHTF1-209ENST00000474926 DCTPP1Q9H773 170 aa8.98□□□□□ -0.97
PHTF1-209ENST00000474926 CPLX1O14810 134 aa8.98□□□□□ -0.97
PHTF1-209ENST00000474926 SNRPA1P09661 255 aaKnown RBP8.98□□□□□ -0.97
PHTF1-209ENST00000474926 TRDNQ13061 729 aa8.98□□□□□ -0.97
PHTF1-209ENST00000474926 STARD3NLO95772 234 aa8.98□□□□□ -0.97
PHTF1-209ENST00000474926 MCM4P33991 863 aa8.98□□□□□ -0.97
PHTF1-209ENST00000474926 CWF19L2Q2TBE0 894 aaKnown RBP8.98□□□□□ -0.97
PHTF1-209ENST00000474926 ANKRD13DQ6ZTN6 518 aa8.98□□□□□ -0.97
PHTF1-209ENST00000474926 HIP1O00291 1037 aa8.97□□□□□ -0.97
PHTF1-209ENST00000474926 TULP1O00294 542 aaPredicted RBP8.97□□□□□ -0.97
PHTF1-209ENST00000474926 RNMTO43148 476 aaKnown RBP8.97□□□□□ -0.97
PHTF1-209ENST00000474926 PSMA5P28066 241 aa8.97□□□□□ -0.97
PHTF1-209ENST00000474926 MCM2P49736 904 aa8.97□□□□□ -0.97
PHTF1-209ENST00000474926 STK3Q13188 491 aa8.97□□□□□ -0.97
PHTF1-209ENST00000474926 RHPN1Q8TCX5 695 aa8.97□□□□□ -0.97
PHTF1-209ENST00000474926 G3V3G9 751 aa8.97□□□□□ -0.97
PHTF1-209ENST00000474926 PDE1AP54750 535 aa8.97□□□□□ -0.97
PHTF1-209ENST00000474926 ATP8B2P98198 1209 aa8.97□□□□□ -0.97
PHTF1-209ENST00000474926 CCDC158Q5M9N0 1113 aa8.97□□□□□ -0.97
PHTF1-209ENST00000474926 TTC39AQ5SRH9 613 aa8.97□□□□□ -0.97
PHTF1-209ENST00000474926 DCAF8Q5TAQ9 597 aa8.97□□□□□ -0.97
PHTF1-209ENST00000474926 ZCRB1Q8TBF4 217 aaKnown RBP8.97□□□□□ -0.97
PHTF1-209ENST00000474926 OTUD7AQ8TE49 926 aaPredicted RBP8.97□□□□□ -0.97
PHTF1-209ENST00000474926 JAKMIP1Q96N16 626 aaKnown RBP8.97□□□□□ -0.97
PHTF1-209ENST00000474926 LARP6Q9BRS8 491 aaKnown RBP8.97□□□□□ -0.97
PHTF1-209ENST00000474926 KAT6BQ8WYB5 2073 aa8.97□□□□□ -0.97
PHTF1-209ENST00000474926 KDM4AO75164 1064 aa8.97□□□□□ -0.97
PHTF1-209ENST00000474926 GPTP24298 496 aa8.97□□□□□ -0.97
PHTF1-209ENST00000474926 CAVIN1Q6NZI2 390 aaKnown RBP8.97□□□□□ -0.97
PHTF1-209ENST00000474926 IL17REQ8NFR9 667 aa8.97□□□□□ -0.97
PHTF1-209ENST00000474926 TMX4Q9H1E5 349 aaPredicted RBP8.97□□□□□ -0.97
PHTF1-209ENST00000474926 CYP46A1Q9Y6A2 500 aa8.97□□□□□ -0.97
PHTF1-209ENST00000474926 CEP152O94986 1710 aa8.97□□□□□ -0.97
PHTF1-209ENST00000474926 RALYLQ86SE5 291 aaKnown RBP8.96□□□□□ -0.97
PHTF1-209ENST00000474926 PA2G4Q9UQ80 394 aaKnown RBP8.96□□□□□ -0.97
PHTF1-209ENST00000474926 NCBP3Q53F19 620 aaKnown RBP8.96□□□□□ -0.97
PHTF1-209ENST00000474926 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.96□□□□□ -0.97
PHTF1-209ENST00000474926 EXOC5O00471 708 aa8.96□□□□□ -0.98
PHTF1-209ENST00000474926 PHF14O94880 888 aa8.96□□□□□ -0.98
PHTF1-209ENST00000474926 KSR2Q6VAB6 950 aa8.96□□□□□ -0.98
PHTF1-209ENST00000474926 PRPF40BQ6NWY9 871 aaKnown RBP8.96□□□□□ -0.98
PHTF1-209ENST00000474926 BICDL1Q6ZP65 573 aa8.96□□□□□ -0.98
PHTF1-209ENST00000474926 PLEKHM2Q8IWE5 1019 aa8.96□□□□□ -0.98
PHTF1-209ENST00000474926 ABCA6Q8N139 1617 aa8.95□□□□□ -0.98
PHTF1-209ENST00000474926 PPRC1Q5VV67 1664 aaKnown RBP8.95□□□□□ -0.98
PHTF1-209ENST00000474926 KCNQ3O43525 872 aa8.95□□□□□ -0.98
PHTF1-209ENST00000474926 NFXL1Q6ZNB6 911 aa8.95□□□□□ -0.98
PHTF1-209ENST00000474926 ADGRB3O60242 1522 aa8.95□□□□□ -0.98
PHTF1-209ENST00000474926 CPLX2Q6PUV4 134 aaKnown RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms