RNA–Protein interactions for RNA: ENST00000474911.5

RTN1-205, Transcript of reticulon 1, humanhuman

TSL 2

Gene RTN1, Length 1,412 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-205ENST00000474911 PIGBQ92521 554 aa17.7■□□□□ 0.42
RTN1-205ENST00000474911 SMARCC1Q92922 1105 aaPredicted RBP17.7■□□□□ 0.42
RTN1-205ENST00000474911 AKT1S1Q96B36 256 aa17.7■□□□□ 0.42
RTN1-205ENST00000474911 SPON1Q9HCB6 807 aa17.7■□□□□ 0.42
RTN1-205ENST00000474911 CCNL1Q9UK58 526 aaPredicted RBP17.7■□□□□ 0.42
RTN1-205ENST00000474911 PALLDQ8WX93 1383 aa17.7■□□□□ 0.42
RTN1-205ENST00000474911 TUBGCP6Q96RT7 1819 aa17.7■□□□□ 0.42
RTN1-205ENST00000474911 HMOX1P09601 288 aa17.69■□□□□ 0.42
RTN1-205ENST00000474911 PRKAR2BP31323 418 aa17.69■□□□□ 0.42
RTN1-205ENST00000474911 ZNF827Q17R98 1081 aa17.69■□□□□ 0.42
RTN1-205ENST00000474911 DCAF5Q96JK2 942 aa17.69■□□□□ 0.42
RTN1-205ENST00000474911 ERVV-2B6SEH9 535 aa17.68■□□□□ 0.42
RTN1-205ENST00000474911 ZNF530Q6P9A1 599 aaPredicted RBP17.68■□□□□ 0.42
RTN1-205ENST00000474911 PDGFDQ9GZP0 370 aaPredicted RBP17.68■□□□□ 0.42
RTN1-205ENST00000474911 TMOD3Q9NYL9 352 aa17.68■□□□□ 0.42
RTN1-205ENST00000474911 SCN11AQ9UI33 1791 aa17.67■□□□□ 0.42
RTN1-205ENST00000474911 VIRMAQ69YN4 1812 aaKnown RBP17.67■□□□□ 0.42
RTN1-205ENST00000474911 SENP3-EIF4A1A0A087X0R7 540 aa17.67■□□□□ 0.42
RTN1-205ENST00000474911 NCBP3Q53F19 620 aaKnown RBP17.67■□□□□ 0.42
RTN1-205ENST00000474911 KDM6AO15550 1401 aaPredicted RBP17.67■□□□□ 0.42
RTN1-205ENST00000474911 KCNQ4P56696 695 aa17.66■□□□□ 0.42
RTN1-205ENST00000474911 C1orf141Q5JVX7 400 aa17.66■□□□□ 0.42
RTN1-205ENST00000474911 SALL2Q9Y467 1007 aaPredicted RBP17.66■□□□□ 0.42
RTN1-205ENST00000474911 ZNF831Q5JPB2 1677 aa17.65■□□□□ 0.42
RTN1-205ENST00000474911 MTFR1LQ9H019 292 aa17.64■□□□□ 0.42
RTN1-205ENST00000474911 COL24A1Q17RW2 1714 aa17.64■□□□□ 0.41
RTN1-205ENST00000474911 AKAP4Q5JQC9 854 aa17.64■□□□□ 0.41
RTN1-205ENST00000474911 C4BP0C0L5 1744 aa17.63■□□□□ 0.41
RTN1-205ENST00000474911 ZBTB7AO95365 584 aa17.63■□□□□ 0.41
RTN1-205ENST00000474911 TMPOP42166 694 aaKnown RBP17.63■□□□□ 0.41
RTN1-205ENST00000474911 CCDC27Q2M243 656 aa17.63■□□□□ 0.41
RTN1-205ENST00000474911 TFCP2L1Q9NZI6 479 aa17.63■□□□□ 0.41
RTN1-205ENST00000474911 ADAMTS7Q9UKP4 1686 aa17.63■□□□□ 0.41
RTN1-205ENST00000474911 PNPLA7Q6ZV29 1317 aa17.62■□□□□ 0.41
RTN1-205ENST00000474911 ZNF521Q96K83 1311 aa17.62■□□□□ 0.41
RTN1-205ENST00000474911 DLG5Q8TDM6 1919 aa17.62■□□□□ 0.41
RTN1-205ENST00000474911 SLC16A10Q8TF71 515 aa17.62■□□□□ 0.41
RTN1-205ENST00000474911 ATG3Q9NT62 314 aa17.62■□□□□ 0.41
RTN1-205ENST00000474911 ASAP1Q9ULH1 1129 aa17.62■□□□□ 0.41
RTN1-205ENST00000474911 LOC102724428A0A0B4J2F2 783 aa17.61■□□□□ 0.41
RTN1-205ENST00000474911 PTGER2P43116 358 aa17.61■□□□□ 0.41
RTN1-205ENST00000474911 SIK1P57059 783 aa17.61■□□□□ 0.41
RTN1-205ENST00000474911 CABP4P57796 275 aa17.61■□□□□ 0.41
RTN1-205ENST00000474911 NEUROD2Q15784 382 aa17.61■□□□□ 0.41
RTN1-205ENST00000474911 PHACTR3Q96KR7 559 aa17.61■□□□□ 0.41
RTN1-205ENST00000474911 RRP7AQ9Y3A4 280 aaKnown RBP17.61■□□□□ 0.41
RTN1-205ENST00000474911 UBR3Q6ZT12 1888 aa17.6■□□□□ 0.41
RTN1-205ENST00000474911 NFE2L2Q16236 605 aa17.6■□□□□ 0.41
RTN1-205ENST00000474911 MTHFSDQ2M296 383 aaKnown RBP17.59■□□□□ 0.41
RTN1-205ENST00000474911 WWC1Q8IX03 1113 aa17.59■□□□□ 0.41
RTN1-205ENST00000474911 SGIP1Q9BQI5 828 aa17.59■□□□□ 0.41
RTN1-205ENST00000474911 PPP1R1BQ9UD71 204 aaPredicted RBP17.59■□□□□ 0.41
RTN1-205ENST00000474911 MRC1P22897 1456 aa17.59■□□□□ 0.41
RTN1-205ENST00000474911 RIPK4P57078 832 aa17.58■□□□□ 0.41
RTN1-205ENST00000474911 ATF5Q9Y2D1 282 aaPredicted RBP17.58■□□□□ 0.41
RTN1-205ENST00000474911 GOLGA2Q08379 1002 aa17.57■□□□□ 0.4
RTN1-205ENST00000474911 NFATC2IPQ8NCF5 419 aa17.57■□□□□ 0.4
RTN1-205ENST00000474911 FLAD1Q8NFF5 587 aa17.57■□□□□ 0.4
RTN1-205ENST00000474911 CICQ96RK0 1608 aaPredicted RBP17.57■□□□□ 0.4
RTN1-205ENST00000474911 COL5A3P25940 1745 aaPredicted RBP17.57■□□□□ 0.4
RTN1-205ENST00000474911 ATP6V1AP38606 617 aa17.56■□□□□ 0.4
RTN1-205ENST00000474911 LMOD3Q0VAK6 560 aa17.56■□□□□ 0.4
RTN1-205ENST00000474911 RNMTO43148 476 aaKnown RBP17.55■□□□□ 0.4
RTN1-205ENST00000474911 WDR63Q8IWG1 891 aa17.55■□□□□ 0.4
RTN1-205ENST00000474911 GAS2L2Q8NHY3 880 aa17.55■□□□□ 0.4
RTN1-205ENST00000474911 SLC52A2Q9HAB3 445 aa17.55■□□□□ 0.4
RTN1-205ENST00000474911 ITPK1Q13572 414 aa17.55■□□□□ 0.4
RTN1-205ENST00000474911 COL23A1Q86Y22 540 aaPredicted RBP17.55■□□□□ 0.4
RTN1-205ENST00000474911 LINC00116Q8NCU8 138 aa17.55■□□□□ 0.4
RTN1-205ENST00000474911 AK7Q96M32 723 aa17.55■□□□□ 0.4
RTN1-205ENST00000474911 LGR6Q9HBX8 967 aa17.55■□□□□ 0.4
RTN1-205ENST00000474911 TRIM35Q9UPQ4 493 aa17.55■□□□□ 0.4
RTN1-205ENST00000474911 MAP3K5Q99683 1374 aa17.53■□□□□ 0.4
RTN1-205ENST00000474911 E9PSI1 815 aa17.53■□□□□ 0.4
RTN1-205ENST00000474911 CDCA7LQ96GN5 454 aa17.53■□□□□ 0.4
RTN1-205ENST00000474911 SLC4A9Q96Q91 983 aa17.53■□□□□ 0.4
RTN1-205ENST00000474911 RBM42Q9BTD8 480 aaKnown RBP17.53■□□□□ 0.4
RTN1-205ENST00000474911 SIPA1L3O60292 1781 aaPredicted RBP17.52■□□□□ 0.4
RTN1-205ENST00000474911 GNAT3A8MTJ3 354 aa17.52■□□□□ 0.4
RTN1-205ENST00000474911 SSFA2P28290 1259 aa17.52■□□□□ 0.4
RTN1-205ENST00000474911 SLFN5Q08AF3 891 aa17.52■□□□□ 0.4
RTN1-205ENST00000474911 IL16Q14005 1332 aa17.51■□□□□ 0.39
RTN1-205ENST00000474911 TJP1Q07157 1748 aa17.51■□□□□ 0.39
RTN1-205ENST00000474911 CALD1Q05682 793 aaKnown RBP17.51■□□□□ 0.39
RTN1-205ENST00000474911 ARXQ96QS3 562 aa17.51■□□□□ 0.39
RTN1-205ENST00000474911 MYH14Q7Z406 1995 aaKnown RBP17.51■□□□□ 0.39
RTN1-205ENST00000474911 UBR2Q8IWV8 1755 aa17.51■□□□□ 0.39
RTN1-205ENST00000474911 POLD1P28340 1107 aa17.5■□□□□ 0.39
RTN1-205ENST00000474911 RC3H1Q5TC82 1133 aaKnown RBP17.5■□□□□ 0.39
RTN1-205ENST00000474911 AMIGO3Q86WK7 504 aa17.5■□□□□ 0.39
RTN1-205ENST00000474911 CNTNAP4Q9C0A0 1308 aa17.5■□□□□ 0.39
RTN1-205ENST00000474911 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.49■□□□□ 0.39
RTN1-205ENST00000474911 HTATSF1O43719 755 aaKnown RBP17.49■□□□□ 0.39
RTN1-205ENST00000474911 TRMT2AQ8IZ69 625 aaKnown RBP17.49■□□□□ 0.39
RTN1-205ENST00000474911 CEMIPQ8WUJ3 1361 aa17.49■□□□□ 0.39
RTN1-205ENST00000474911 GNPATO15228 680 aa17.48■□□□□ 0.39
RTN1-205ENST00000474911 PTCD1O75127 700 aaKnown RBP17.48■□□□□ 0.39
RTN1-205ENST00000474911 DUSP27Q5VZP5 1158 aa17.48■□□□□ 0.39
RTN1-205ENST00000474911 IL17REQ8NFR9 667 aa17.48■□□□□ 0.39
RTN1-205ENST00000474911 FHDC1Q9C0D6 1143 aaPredicted RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms