RNA–Protein interactions for RNA: ENST00000474194.1

RFWD2-207, Transcript of E3 ubiquitin-protein ligase RFWD2, humanhuman

TSL 3

Gene RFWD2, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD2-207ENST00000474194 HTATSF1O43719 755 aaKnown RBP33.36■■■□□ 2.93
RFWD2-207ENST00000474194 TMPOP42166 694 aaKnown RBP33.36■■■□□ 2.93
RFWD2-207ENST00000474194 MIER1Q8N108 512 aa33.36■■■□□ 2.93
RFWD2-207ENST00000474194 PALLDQ8WX93 1383 aa33.35■■■□□ 2.93
RFWD2-207ENST00000474194 TXNRD1Q16881 649 aa33.35■■■□□ 2.93
RFWD2-207ENST00000474194 MCM10Q7L590 875 aa33.35■■■□□ 2.93
RFWD2-207ENST00000474194 RTF1Q92541 710 aaKnown RBP33.35■■■□□ 2.93
RFWD2-207ENST00000474194 ASAP1Q9ULH1 1129 aa33.35■■■□□ 2.93
RFWD2-207ENST00000474194 DCTN1Q14203 1278 aa33.34■■■□□ 2.93
RFWD2-207ENST00000474194 RRP7AQ9Y3A4 280 aaKnown RBP33.34■■■□□ 2.93
RFWD2-207ENST00000474194 PAPPAQ13219 1627 aa33.33■■■□□ 2.93
RFWD2-207ENST00000474194 RIPK4P57078 832 aa33.33■■■□□ 2.93
RFWD2-207ENST00000474194 ATG3Q9NT62 314 aa33.33■■■□□ 2.93
RFWD2-207ENST00000474194 SMARCC1Q92922 1105 aaPredicted RBP33.32■■■□□ 2.92
RFWD2-207ENST00000474194 FAM9BQ8IZU0 186 aa33.31■■■□□ 2.92
RFWD2-207ENST00000474194 TEFQ10587 303 aa33.3■■■□□ 2.92
RFWD2-207ENST00000474194 APAF1O14727 1248 aa33.29■■■□□ 2.92
RFWD2-207ENST00000474194 NEUROD2Q15784 382 aa33.29■■■□□ 2.92
RFWD2-207ENST00000474194 LRRC4BQ9NT99 713 aa33.27■■■□□ 2.92
RFWD2-207ENST00000474194 THUMPD2Q9BTF0 503 aaKnown RBP33.26■■■□□ 2.91
RFWD2-207ENST00000474194 KCNQ4P56696 695 aa33.25■■■□□ 2.91
RFWD2-207ENST00000474194 SLC27A3Q5K4L6 730 aa33.25■■■□□ 2.91
RFWD2-207ENST00000474194 CCNL1Q9UK58 526 aaPredicted RBP33.25■■■□□ 2.91
RFWD2-207ENST00000474194 LMOD3Q0VAK6 560 aa33.24■■■□□ 2.91
RFWD2-207ENST00000474194 SLC39A6Q13433 755 aa33.24■■■□□ 2.91
RFWD2-207ENST00000474194 TRIM35Q9UPQ4 493 aa33.24■■■□□ 2.91
RFWD2-207ENST00000474194 UBR2Q8IWV8 1755 aa33.23■■■□□ 2.91
RFWD2-207ENST00000474194 LOC102724428A0A0B4J2F2 783 aa33.22■■■□□ 2.91
RFWD2-207ENST00000474194 SIK1P57059 783 aa33.22■■■□□ 2.91
RFWD2-207ENST00000474194 TAF1LQ8IZX4 1826 aa33.22■■■□□ 2.91
RFWD2-207ENST00000474194 C5P01031 1676 aa33.21■■■□□ 2.91
RFWD2-207ENST00000474194 KCPQ6ZWJ8 1503 aa33.21■■■□□ 2.91
RFWD2-207ENST00000474194 ZNF831Q5JPB2 1677 aa33.2■■■□□ 2.91
RFWD2-207ENST00000474194 SENP3-EIF4A1A0A087X0R7 540 aa33.19■■■□□ 2.9
RFWD2-207ENST00000474194 SLC4A9Q96Q91 983 aa33.19■■■□□ 2.9
RFWD2-207ENST00000474194 ANO8Q9HCE9 1232 aaPredicted RBP33.19■■■□□ 2.9
RFWD2-207ENST00000474194 BTBD11A6QL63 1104 aa33.18■■■□□ 2.9
RFWD2-207ENST00000474194 RBM42Q9BTD8 480 aaKnown RBP33.18■■■□□ 2.9
RFWD2-207ENST00000474194 PTCD1O75127 700 aaKnown RBP33.17■■■□□ 2.9
RFWD2-207ENST00000474194 TAF7Q15545 349 aaPredicted RBP33.16■■■□□ 2.9
RFWD2-207ENST00000474194 ZNF790Q6PG37 636 aa33.16■■■□□ 2.9
RFWD2-207ENST00000474194 KDM3BQ7LBC6 1761 aa33.16■■■□□ 2.9
RFWD2-207ENST00000474194 ATP6V1AP38606 617 aa33.15■■■□□ 2.9
RFWD2-207ENST00000474194 ITPK1Q13572 414 aa33.15■■■□□ 2.9
RFWD2-207ENST00000474194 CICQ96RK0 1608 aaPredicted RBP33.15■■■□□ 2.9
RFWD2-207ENST00000474194 TJP1Q07157 1748 aa33.14■■■□□ 2.9
RFWD2-207ENST00000474194 KCNQ3O43525 872 aa33.14■■■□□ 2.9
RFWD2-207ENST00000474194 NBPF14Q5TI25 921 aa33.14■■■□□ 2.9
RFWD2-207ENST00000474194 TTC5Q8N0Z6 440 aa33.14■■■□□ 2.9
RFWD2-207ENST00000474194 COL5A3P25940 1745 aaPredicted RBP33.13■■■□□ 2.89
RFWD2-207ENST00000474194 C4BP0C0L5 1744 aa33.12■■■□□ 2.89
RFWD2-207ENST00000474194 MIS18AQ9NYP9 233 aa33.12■■■□□ 2.89
RFWD2-207ENST00000474194 ZNF827Q17R98 1081 aa33.11■■■□□ 2.89
RFWD2-207ENST00000474194 LINC00116Q8NCU8 138 aa33.11■■■□□ 2.89
RFWD2-207ENST00000474194 ZNF496Q96IT1 587 aaPredicted RBP33.1■■■□□ 2.89
RFWD2-207ENST00000474194 STK32BQ9NY57 414 aa33.1■■■□□ 2.89
RFWD2-207ENST00000474194 AKT1S1Q96B36 256 aa33.09■■■□□ 2.89
RFWD2-207ENST00000474194 TUBGCP6Q96RT7 1819 aa33.08■■■□□ 2.89
RFWD2-207ENST00000474194 SLC15A2Q16348 729 aa33.08■■■□□ 2.89
RFWD2-207ENST00000474194 R3HDM1Q15032 1099 aaKnown RBP33.07■■■□□ 2.88
RFWD2-207ENST00000474194 CCDC27Q2M243 656 aa33.07■■■□□ 2.88
RFWD2-207ENST00000474194 NCBP3Q53F19 620 aaKnown RBP33.07■■■□□ 2.88
RFWD2-207ENST00000474194 PSDA5PKW4 1024 aaPredicted RBP33.06■■■□□ 2.88
RFWD2-207ENST00000474194 HEG1Q9ULI3 1381 aa33.06■■■□□ 2.88
RFWD2-207ENST00000474194 VSIG10Q8N0Z9 540 aa33.05■■■□□ 2.88
RFWD2-207ENST00000474194 FMNL2Q96PY5 1086 aa33.05■■■□□ 2.88
RFWD2-207ENST00000474194 HMGB2P26583 209 aaKnown RBP33.04■■■□□ 2.88
RFWD2-207ENST00000474194 DNAJC10Q8IXB1 793 aa33.04■■■□□ 2.88
RFWD2-207ENST00000474194 TSPYL4Q9UJ04 414 aa33.04■■■□□ 2.88
RFWD2-207ENST00000474194 SALL2Q9Y467 1007 aaPredicted RBP33.04■■■□□ 2.88
RFWD2-207ENST00000474194 QSER1Q2KHR3 1735 aa33.04■■■□□ 2.88
RFWD2-207ENST00000474194 WWC1Q8IX03 1113 aa33.03■■■□□ 2.88
RFWD2-207ENST00000474194 BABAM1Q9NWV8 329 aa33.03■■■□□ 2.88
RFWD2-207ENST00000474194 MYH14Q7Z406 1995 aaKnown RBP33.02■■■□□ 2.88
RFWD2-207ENST00000474194 UBR3Q6ZT12 1888 aa33.01■■■□□ 2.88
RFWD2-207ENST00000474194 CHL1O00533 1208 aa33■■■□□ 2.87
RFWD2-207ENST00000474194 LAS1LQ9Y4W2 734 aaKnown RBP33■■■□□ 2.87
RFWD2-207ENST00000474194 CALD1Q05682 793 aaKnown RBP32.99■■■□□ 2.87
RFWD2-207ENST00000474194 CNTNAP4Q9C0A0 1308 aa32.99■■■□□ 2.87
RFWD2-207ENST00000474194 EIF4A1P60842 406 aaKnown RBP32.98■■■□□ 2.87
RFWD2-207ENST00000474194 AK7Q96M32 723 aa32.98■■■□□ 2.87
RFWD2-207ENST00000474194 CFAP44Q96MT7 982 aa32.98■■■□□ 2.87
RFWD2-207ENST00000474194 TFCP2L1Q9NZI6 479 aa32.98■■■□□ 2.87
RFWD2-207ENST00000474194 CASZ1Q86V15 1759 aa32.98■■■□□ 2.87
RFWD2-207ENST00000474194 ZNF853P0CG23 659 aa32.97■■■□□ 2.87
RFWD2-207ENST00000474194 NGEFQ8N5V2 710 aa32.97■■■□□ 2.87
RFWD2-207ENST00000474194 IFT57Q9NWB7 429 aa32.97■■■□□ 2.87
RFWD2-207ENST00000474194 AMIGO3Q86WK7 504 aa32.96■■■□□ 2.87
RFWD2-207ENST00000474194 PRAMEF22A3QJZ6 481 aa32.95■■■□□ 2.87
RFWD2-207ENST00000474194 CYP19A1P11511 503 aaPredicted RBP32.95■■■□□ 2.87
RFWD2-207ENST00000474194 CRKLP46109 303 aaKnown RBP32.95■■■□□ 2.87
RFWD2-207ENST00000474194 RC3H1Q5TC82 1133 aaKnown RBP32.95■■■□□ 2.87
RFWD2-207ENST00000474194 PNPLA7Q6ZV29 1317 aa32.95■■■□□ 2.86
RFWD2-207ENST00000474194 LAMB4A4D0S4 1761 aa32.94■■■□□ 2.86
RFWD2-207ENST00000474194 SNRPA1P09661 255 aaKnown RBP32.94■■■□□ 2.86
RFWD2-207ENST00000474194 PDGFDQ9GZP0 370 aaPredicted RBP32.94■■■□□ 2.86
RFWD2-207ENST00000474194 GNPATO15228 680 aa32.93■■■□□ 2.86
RFWD2-207ENST00000474194 GNAI1P63096 354 aa32.93■■■□□ 2.86
RFWD2-207ENST00000474194 TEX13AQ9BXU3 409 aaPredicted RBP32.93■■■□□ 2.86
RFWD2-207ENST00000474194 MBIPQ9NS73 344 aa32.93■■■□□ 2.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms