RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 USP17L13C9JLJ4 530 aa6.6□□□□□ -1.35
TMEM39A-206ENST00000473684 USP17L12C9JPN9 530 aa6.6□□□□□ -1.35
TMEM39A-206ENST00000473684 USP17L11C9JVI0 530 aa6.6□□□□□ -1.35
TMEM39A-206ENST00000473684 USP17L21D6R901 530 aa6.6□□□□□ -1.35
TMEM39A-206ENST00000473684 USP17L18D6R9N7 530 aa6.6□□□□□ -1.35
TMEM39A-206ENST00000473684 USP17L22D6RA61 530 aa6.6□□□□□ -1.35
TMEM39A-206ENST00000473684 USP17L17D6RBQ6 530 aa6.6□□□□□ -1.35
TMEM39A-206ENST00000473684 USP17L19D6RCP7 530 aa6.6□□□□□ -1.35
TMEM39A-206ENST00000473684 USP17L20D6RJB6 530 aa6.6□□□□□ -1.35
TMEM39A-206ENST00000473684 USP17L24Q0WX57 530 aa6.6□□□□□ -1.35
TMEM39A-206ENST00000473684 CRTC2Q53ET0 693 aaPredicted RBP6.6□□□□□ -1.35
TMEM39A-206ENST00000473684 TRAF7Q6Q0C0 670 aa6.6□□□□□ -1.35
TMEM39A-206ENST00000473684 DHX37Q8IY37 1157 aaKnown RBP6.6□□□□□ -1.35
TMEM39A-206ENST00000473684 ABCC2Q92887 1545 aa6.6□□□□□ -1.35
TMEM39A-206ENST00000473684 TERF1P54274 439 aa6.59□□□□□ -1.35
TMEM39A-206ENST00000473684 PTK7Q13308 1070 aa6.59□□□□□ -1.35
TMEM39A-206ENST00000473684 MAP7D1Q3KQU3 841 aa6.59□□□□□ -1.35
TMEM39A-206ENST00000473684 RGS22Q8NE09 1264 aa6.59□□□□□ -1.35
TMEM39A-206ENST00000473684 ATP5J2-PTCD1G3V325 749 aa6.59□□□□□ -1.35
TMEM39A-206ENST00000473684 PTPN5P54829 565 aa6.59□□□□□ -1.35
TMEM39A-206ENST00000473684 MFAP1P55081 439 aaKnown RBP6.59□□□□□ -1.35
TMEM39A-206ENST00000473684 BACH2Q9BYV9 841 aa6.59□□□□□ -1.35
TMEM39A-206ENST00000473684 TNNT2P45379 298 aaPredicted RBP6.58□□□□□ -1.36
TMEM39A-206ENST00000473684 TSGA10IPQ3SY00 556 aa6.58□□□□□ -1.36
TMEM39A-206ENST00000473684 DZIP3Q86Y13 1208 aaKnown RBP6.58□□□□□ -1.36
TMEM39A-206ENST00000473684 BAP1Q92560 729 aa6.58□□□□□ -1.36
TMEM39A-206ENST00000473684 IVNS1ABPQ9Y6Y0 642 aa6.58□□□□□ -1.36
TMEM39A-206ENST00000473684 ABCA8O94911 1581 aa6.58□□□□□ -1.36
TMEM39A-206ENST00000473684 BCORL1Q5H9F3 1711 aa6.58□□□□□ -1.36
TMEM39A-206ENST00000473684 RASA1P20936 1047 aa6.58□□□□□ -1.36
TMEM39A-206ENST00000473684 LARP1Q6PKG0 1096 aaKnown RBP6.58□□□□□ -1.36
TMEM39A-206ENST00000473684 DMTNQ08495 405 aa6.58□□□□□ -1.36
TMEM39A-206ENST00000473684 EML3Q32P44 896 aa6.58□□□□□ -1.36
TMEM39A-206ENST00000473684 TAF3Q5VWG9 929 aa6.58□□□□□ -1.36
TMEM39A-206ENST00000473684 CARD14Q9BXL6 1004 aa6.58□□□□□ -1.36
TMEM39A-206ENST00000473684 TMEM51Q9NW97 253 aa6.58□□□□□ -1.36
TMEM39A-206ENST00000473684 RNF123Q5XPI4 1314 aa6.57□□□□□ -1.36
TMEM39A-206ENST00000473684 ZBED9Q6R2W3 1325 aa6.57□□□□□ -1.36
TMEM39A-206ENST00000473684 KIF20AO95235 890 aa6.57□□□□□ -1.36
TMEM39A-206ENST00000473684 S1PR4O95977 384 aa6.57□□□□□ -1.36
TMEM39A-206ENST00000473684 NKX2-3Q8TAU0 364 aa6.57□□□□□ -1.36
TMEM39A-206ENST00000473684 MROH2AA6NES4 1674 aa6.57□□□□□ -1.36
TMEM39A-206ENST00000473684 MAGEB6P1A0A0J9YX57 407 aa6.57□□□□□ -1.36
TMEM39A-206ENST00000473684 FAM69CQ0P6D2 419 aa6.57□□□□□ -1.36
TMEM39A-206ENST00000473684 C4orf48Q5BLP8 95 aa6.57□□□□□ -1.36
TMEM39A-206ENST00000473684 BPHLQ86WA6 291 aaPredicted RBP6.57□□□□□ -1.36
TMEM39A-206ENST00000473684 ZNF511Q8NB15 262 aa6.57□□□□□ -1.36
TMEM39A-206ENST00000473684 FOXJ1Q92949 421 aa6.57□□□□□ -1.36
TMEM39A-206ENST00000473684 CCDC85AQ96PX6 553 aaPredicted RBP6.57□□□□□ -1.36
TMEM39A-206ENST00000473684 GNEQ9Y223 722 aaKnown RBP6.57□□□□□ -1.36
TMEM39A-206ENST00000473684 RAD54L2Q9Y4B4 1467 aa6.57□□□□□ -1.36
TMEM39A-206ENST00000473684 FAM135AQ9P2D6 1515 aa6.57□□□□□ -1.36
TMEM39A-206ENST00000473684 ERFEQ4G0M1 354 aa6.56□□□□□ -1.36
TMEM39A-206ENST00000473684 PHLDB3Q6NSJ2 640 aa6.56□□□□□ -1.36
TMEM39A-206ENST00000473684 FCF1Q9Y324 198 aaKnown RBP6.56□□□□□ -1.36
TMEM39A-206ENST00000473684 IQGAP2Q13576 1575 aa6.56□□□□□ -1.36
TMEM39A-206ENST00000473684 KIAA0556O60303 1618 aa6.56□□□□□ -1.36
TMEM39A-206ENST00000473684 CLDN10P78369 228 aa6.56□□□□□ -1.36
TMEM39A-206ENST00000473684 FAM200AQ8TCP9 573 aa6.56□□□□□ -1.36
TMEM39A-206ENST00000473684 CDCA7Q9BWT1 371 aaPredicted RBP6.56□□□□□ -1.36
TMEM39A-206ENST00000473684 SLAIN2Q9P270 581 aa6.56□□□□□ -1.36
TMEM39A-206ENST00000473684 GIGYF1O75420 1035 aaPredicted RBP6.55□□□□□ -1.36
TMEM39A-206ENST00000473684 LINC01559Q495D7 138 aa6.55□□□□□ -1.36
TMEM39A-206ENST00000473684 ANKMY2Q8IV38 441 aa6.55□□□□□ -1.36
TMEM39A-206ENST00000473684 OGFOD1Q8N543 542 aa6.55□□□□□ -1.36
TMEM39A-206ENST00000473684 ANP32BQ92688 251 aaKnown RBP6.55□□□□□ -1.36
TMEM39A-206ENST00000473684 MTMR7Q9Y216 660 aa6.55□□□□□ -1.36
TMEM39A-206ENST00000473684 SECISBP2LQ93073 1101 aaKnown RBP6.55□□□□□ -1.36
TMEM39A-206ENST00000473684 DOLKQ9UPQ8 538 aa6.55□□□□□ -1.36
TMEM39A-206ENST00000473684 RICTORQ6R327 1708 aa6.55□□□□□ -1.36
TMEM39A-206ENST00000473684 SAMD9Q5K651 1589 aa6.55□□□□□ -1.36
TMEM39A-206ENST00000473684 FRAT2O75474 233 aaPredicted RBP6.55□□□□□ -1.36
TMEM39A-206ENST00000473684 TRIM50Q86XT4 487 aa6.55□□□□□ -1.36
TMEM39A-206ENST00000473684 C1QTNF2Q9BXJ5 285 aa6.55□□□□□ -1.36
TMEM39A-206ENST00000473684 SMG6Q86US8 1419 aaKnown RBP6.54□□□□□ -1.36
TMEM39A-206ENST00000473684 ESPNB1AK53 854 aa6.54□□□□□ -1.36
TMEM39A-206ENST00000473684 HSP90B1P14625 803 aaKnown RBP6.54□□□□□ -1.36
TMEM39A-206ENST00000473684 SND1Q7KZF4 910 aaKnown RBP eCLIP6.54□□□□□ -1.362e-7■■■□□ 16.2
TMEM39A-206ENST00000473684 CLP1Q92989 425 aaKnown RBP6.54□□□□□ -1.36
TMEM39A-206ENST00000473684 ZNF830Q96NB3 372 aaPredicted RBP6.54□□□□□ -1.36
TMEM39A-206ENST00000473684 ZHX1Q9UKY1 873 aaPredicted RBP6.54□□□□□ -1.36
TMEM39A-206ENST00000473684 NOD1Q9Y239 953 aa6.54□□□□□ -1.36
TMEM39A-206ENST00000473684 DKK1O94907 266 aa6.54□□□□□ -1.36
TMEM39A-206ENST00000473684 SSFA2P28290 1259 aa6.54□□□□□ -1.36
TMEM39A-206ENST00000473684 AGERQ15109 404 aa6.54□□□□□ -1.36
TMEM39A-206ENST00000473684 TXNDC2Q86VQ3 553 aa6.54□□□□□ -1.36
TMEM39A-206ENST00000473684 DNAAF2Q9NVR5 837 aaKnown RBP6.54□□□□□ -1.36
TMEM39A-206ENST00000473684 EPRSP07814 1512 aaKnown RBP6.54□□□□□ -1.36
TMEM39A-206ENST00000473684 ATP1A2P50993 1020 aa6.53□□□□□ -1.36
TMEM39A-206ENST00000473684 DPYDQ12882 1025 aa6.53□□□□□ -1.36
TMEM39A-206ENST00000473684 LARGE2Q8N3Y3 721 aa6.53□□□□□ -1.36
TMEM39A-206ENST00000473684 GTPBP4Q9BZE4 634 aaKnown RBP6.53□□□□□ -1.36
TMEM39A-206ENST00000473684 ZBTB7BO15156 539 aaPredicted RBP6.53□□□□□ -1.36
TMEM39A-206ENST00000473684 RNF20Q5VTR2 975 aa6.53□□□□□ -1.36
TMEM39A-206ENST00000473684 TTC37Q6PGP7 1564 aa6.53□□□□□ -1.36
TMEM39A-206ENST00000473684 FSD2A1L4K1 749 aa6.52□□□□□ -1.36
TMEM39A-206ENST00000473684 LETM1O95202 739 aaPredicted RBP6.52□□□□□ -1.36
TMEM39A-206ENST00000473684 SH3BP2P78314 561 aa6.52□□□□□ -1.36
TMEM39A-206ENST00000473684 TRMT44Q8IYL2 757 aaKnown RBP6.52□□□□□ -1.36
TMEM39A-206ENST00000473684 SIX5Q8N196 739 aa6.52□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms