RNA–Protein interactions for RNA: ENST00000473371.1

NHLRC3-204, Transcript of NHL repeat containing 3, humanhuman

TSL 2

Gene NHLRC3, Length 3,237 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-204ENST00000473371 TSPY26PQ9H489 355 aa17.31■□□□□ 0.36
NHLRC3-204ENST00000473371 PALD1Q9ULE6 856 aa17.31■□□□□ 0.36
NHLRC3-204ENST00000473371 UQCRHLA0A096LP55 91 aa17.31■□□□□ 0.36
NHLRC3-204ENST00000473371 TRIM6-TRIM34B2RNG4 842 aa17.31■□□□□ 0.36
NHLRC3-204ENST00000473371 UQCRHP07919 91 aa17.31■□□□□ 0.36
NHLRC3-204ENST00000473371 SYAP1Q96A49 352 aaPredicted RBP17.31■□□□□ 0.36
NHLRC3-204ENST00000473371 PTMAP06454 111 aaKnown RBP17.3■□□□□ 0.36
NHLRC3-204ENST00000473371 LRRCC1Q9C099 1032 aa17.3■□□□□ 0.36
NHLRC3-204ENST00000473371 SETD1AO15047 1707 aaKnown RBP17.3■□□□□ 0.36
NHLRC3-204ENST00000473371 DNAJC5Q9H3Z4 198 aa17.3■□□□□ 0.36
NHLRC3-204ENST00000473371 TSPYL4Q9UJ04 414 aa17.3■□□□□ 0.36
NHLRC3-204ENST00000473371 MX1P20591 662 aa17.3■□□□□ 0.36
NHLRC3-204ENST00000473371 NRKQ7Z2Y5 1582 aa17.3■□□□□ 0.36
NHLRC3-204ENST00000473371 FOXD4L6Q3SYB3 417 aaPredicted RBP17.29■□□□□ 0.36
NHLRC3-204ENST00000473371 FOXD4L3Q6VB84 417 aaPredicted RBP17.29■□□□□ 0.36
NHLRC3-204ENST00000473371 INTS4Q96HW7 963 aaKnown RBP17.29■□□□□ 0.36
NHLRC3-204ENST00000473371 METP08581 1390 aa17.29■□□□□ 0.36
NHLRC3-204ENST00000473371 ANAPC15P60006 121 aa17.29■□□□□ 0.36
NHLRC3-204ENST00000473371 CRB1P82279 1406 aa17.29■□□□□ 0.36
NHLRC3-204ENST00000473371 C3P01024 1663 aa17.29■□□□□ 0.36
NHLRC3-204ENST00000473371 HSP90AB2PQ58FF8 381 aa17.28■□□□□ 0.36
NHLRC3-204ENST00000473371 RTF1Q92541 710 aaKnown RBP17.28■□□□□ 0.36
NHLRC3-204ENST00000473371 CHMLP26374 656 aa17.28■□□□□ 0.36
NHLRC3-204ENST00000473371 CYB5RLQ6IPT4 315 aa17.28■□□□□ 0.36
NHLRC3-204ENST00000473371 ITSN1Q15811 1721 aa17.28■□□□□ 0.36
NHLRC3-204ENST00000473371 MAP7D2Q96T17 732 aa17.27■□□□□ 0.36
NHLRC3-204ENST00000473371 SALL3Q9BXA9 1300 aa17.27■□□□□ 0.36
NHLRC3-204ENST00000473371 SOX12O15370 315 aa17.27■□□□□ 0.36
NHLRC3-204ENST00000473371 STK31Q9BXU1 1019 aa17.27■□□□□ 0.36
NHLRC3-204ENST00000473371 UPF3BQ9BZI7 483 aaKnown RBP17.27■□□□□ 0.36
NHLRC3-204ENST00000473371 TTC21BQ7Z4L5 1316 aa17.27■□□□□ 0.35
NHLRC3-204ENST00000473371 FOXO3O43524 673 aa17.26■□□□□ 0.35
NHLRC3-204ENST00000473371 GDPD2Q9HCC8 539 aa17.26■□□□□ 0.35
NHLRC3-204ENST00000473371 PRR36Q9H6K5 1346 aa17.26■□□□□ 0.35
NHLRC3-204ENST00000473371 AKAP12Q02952 1782 aa17.26■□□□□ 0.35
NHLRC3-204ENST00000473371 PHF14O94880 888 aa17.26■□□□□ 0.35
NHLRC3-204ENST00000473371 GNAI3P08754 354 aa17.25■□□□□ 0.35
NHLRC3-204ENST00000473371 PNMA6EA0A0J9YXQ4 647 aa17.25■□□□□ 0.35
NHLRC3-204ENST00000473371 GADD45BO75293 160 aaPredicted RBP17.25■□□□□ 0.35
NHLRC3-204ENST00000473371 SASS6Q6UVJ0 657 aa17.25■□□□□ 0.35
NHLRC3-204ENST00000473371 ATP8B2P98198 1209 aa17.24■□□□□ 0.35
NHLRC3-204ENST00000473371 FKBP5Q13451 457 aaPredicted RBP17.24■□□□□ 0.35
NHLRC3-204ENST00000473371 WDR33Q9C0J8 1336 aaKnown RBP17.24■□□□□ 0.35
NHLRC3-204ENST00000473371 SSH2Q76I76 1423 aa17.24■□□□□ 0.35
NHLRC3-204ENST00000473371 MTHFSDQ2M296 383 aaKnown RBP17.24■□□□□ 0.35
NHLRC3-204ENST00000473371 USP48Q86UV5 1035 aa17.24■□□□□ 0.35
NHLRC3-204ENST00000473371 DYNC1I1O14576 645 aa17.23■□□□□ 0.35
NHLRC3-204ENST00000473371 KIAA2012Q0VF49 1180 aa17.23■□□□□ 0.35
NHLRC3-204ENST00000473371 SRCIN1Q9C0H9 1055 aa17.23■□□□□ 0.35
NHLRC3-204ENST00000473371 UNC5CLQ8IV45 518 aa17.23■□□□□ 0.35
NHLRC3-204ENST00000473371 STAP2Q9UGK3 403 aa17.23■□□□□ 0.35
NHLRC3-204ENST00000473371 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.23■□□□□ 0.35
NHLRC3-204ENST00000473371 NRXN3Q9Y4C0 1643 aa17.22■□□□□ 0.35
NHLRC3-204ENST00000473371 NUTM2FA1L443 756 aa17.22■□□□□ 0.35
NHLRC3-204ENST00000473371 FLIIQ13045 1269 aa17.22■□□□□ 0.35
NHLRC3-204ENST00000473371 MLECQ14165 292 aa17.22■□□□□ 0.35
NHLRC3-204ENST00000473371 ACEP12821 1306 aa17.22■□□□□ 0.35
NHLRC3-204ENST00000473371 MAP3K19Q56UN5 1328 aa17.22■□□□□ 0.35
NHLRC3-204ENST00000473371 SIRT1Q96EB6 747 aa17.22■□□□□ 0.35
NHLRC3-204ENST00000473371 NECTIN2Q92692 538 aa17.21■□□□□ 0.35
NHLRC3-204ENST00000473371 PLPPR3Q6T4P5 718 aa17.21■□□□□ 0.35
NHLRC3-204ENST00000473371 PPP6R1Q9UPN7 881 aa17.21■□□□□ 0.35
NHLRC3-204ENST00000473371 LRRFIP2Q9Y608 721 aaKnown RBP17.21■□□□□ 0.35
NHLRC3-204ENST00000473371 OVOS2A0A0J9YW53 1432 aa17.2■□□□□ 0.34
NHLRC3-204ENST00000473371 OVOS2Q6IE36 1432 aa17.2■□□□□ 0.34
NHLRC3-204ENST00000473371 TUBGCP6Q96RT7 1819 aa17.2■□□□□ 0.34
NHLRC3-204ENST00000473371 TPRNQ4KMQ1 711 aa17.2■□□□□ 0.34
NHLRC3-204ENST00000473371 DNTTIP2Q5QJE6 756 aaKnown RBP17.2■□□□□ 0.34
NHLRC3-204ENST00000473371 SPATA31D1Q6ZQQ2 1576 aa17.2■□□□□ 0.34
NHLRC3-204ENST00000473371 CCDC30Q5VVM6 783 aa17.2■□□□□ 0.34
NHLRC3-204ENST00000473371 MPNDQ8N594 471 aa17.2■□□□□ 0.34
NHLRC3-204ENST00000473371 IL1RAPL2Q9NP60 686 aa17.2■□□□□ 0.34
NHLRC3-204ENST00000473371 ZBTB7CA1YPR0 619 aa17.19■□□□□ 0.34
NHLRC3-204ENST00000473371 FAM184AQ8NB25 1140 aa17.19■□□□□ 0.34
NHLRC3-204ENST00000473371 ARHGEF10O15013 1369 aa17.19■□□□□ 0.34
NHLRC3-204ENST00000473371 PEAK1Q9H792 1746 aa17.19■□□□□ 0.34
NHLRC3-204ENST00000473371 UVSSAQ2YD98 709 aa17.19■□□□□ 0.34
NHLRC3-204ENST00000473371 IL17RAQ96F46 866 aa17.19■□□□□ 0.34
NHLRC3-204ENST00000473371 HSPA4P34932 840 aa17.19■□□□□ 0.34
NHLRC3-204ENST00000473371 MTERF4Q7Z6M4 381 aaKnown RBP17.19■□□□□ 0.34
NHLRC3-204ENST00000473371 RGPD1P0DJD0 1748 aa17.18■□□□□ 0.34
NHLRC3-204ENST00000473371 CCDC183Q5T5S1 534 aa17.18■□□□□ 0.34
NHLRC3-204ENST00000473371 NUTM1Q86Y26 1132 aa17.18■□□□□ 0.34
NHLRC3-204ENST00000473371 IL25Q9H293 177 aa17.18■□□□□ 0.34
NHLRC3-204ENST00000473371 TECPR2O15040 1411 aa17.18■□□□□ 0.34
NHLRC3-204ENST00000473371 USP25Q9UHP3 1055 aa17.17■□□□□ 0.34
NHLRC3-204ENST00000473371 AOX1Q06278 1338 aa17.17■□□□□ 0.34
NHLRC3-204ENST00000473371 MAP4K4O95819 1239 aaPredicted RBP17.17■□□□□ 0.34
NHLRC3-204ENST00000473371 ARID3AQ99856 593 aa17.17■□□□□ 0.34
NHLRC3-204ENST00000473371 CNPY2Q9Y2B0 182 aa17.17■□□□□ 0.34
NHLRC3-204ENST00000473371 UBTFL1P0CB47 393 aaPredicted RBP17.17■□□□□ 0.34
NHLRC3-204ENST00000473371 HDGFP51858 240 aaKnown RBP17.17■□□□□ 0.34
NHLRC3-204ENST00000473371 EPB41L2O43491 1005 aaKnown RBP17.16■□□□□ 0.34
NHLRC3-204ENST00000473371 ZNF830Q96NB3 372 aaPredicted RBP17.16■□□□□ 0.34
NHLRC3-204ENST00000473371 RIMS1Q86UR5 1692 aaKnown RBP17.16■□□□□ 0.34
NHLRC3-204ENST00000473371 TCHHQ07283 1943 aa17.16■□□□□ 0.34
NHLRC3-204ENST00000473371 RPAP1Q9BWH6 1393 aaPredicted RBP17.16■□□□□ 0.34
NHLRC3-204ENST00000473371 TMEM87AQ8NBN3 555 aa17.15■□□□□ 0.34
NHLRC3-204ENST00000473371 USP6P35125 1406 aa17.15■□□□□ 0.34
NHLRC3-204ENST00000473371 PLEKHG3A1L390 1219 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms