RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 TEFQ10587 303 aa27.42■■□□□ 1.98
TOP3A-204ENST00000472959 MRC1P22897 1456 aa27.42■■□□□ 1.98
TOP3A-204ENST00000472959 ADAMTS7Q9UKP4 1686 aa27.42■■□□□ 1.98
TOP3A-204ENST00000472959 SCN11AQ9UI33 1791 aa27.41■■□□□ 1.98
TOP3A-204ENST00000472959 HMGB2P26583 209 aaKnown RBP27.41■■□□□ 1.98
TOP3A-204ENST00000472959 RIPK4P57078 832 aa27.4■■□□□ 1.98
TOP3A-204ENST00000472959 LMOD3Q0VAK6 560 aa27.39■■□□□ 1.98
TOP3A-204ENST00000472959 NBPF14Q5TI25 921 aa27.39■■□□□ 1.98
TOP3A-204ENST00000472959 MCM10Q7L590 875 aa27.39■■□□□ 1.98
TOP3A-204ENST00000472959 CCNL1Q9UK58 526 aaPredicted RBP27.39■■□□□ 1.98
TOP3A-204ENST00000472959 LRRC4BQ9NT99 713 aa27.37■■□□□ 1.97
TOP3A-204ENST00000472959 DCTN1Q14203 1278 aa27.36■■□□□ 1.97
TOP3A-204ENST00000472959 RREB1Q92766 1687 aa27.36■■□□□ 1.97
TOP3A-204ENST00000472959 LOC102724428A0A0B4J2F2 783 aa27.35■■□□□ 1.97
TOP3A-204ENST00000472959 SIK1P57059 783 aa27.35■■□□□ 1.97
TOP3A-204ENST00000472959 RRP7AQ9Y3A4 280 aaKnown RBP27.35■■□□□ 1.97
TOP3A-204ENST00000472959 APAF1O14727 1248 aa27.34■■□□□ 1.97
TOP3A-204ENST00000472959 NEUROD2Q15784 382 aa27.33■■□□□ 1.97
TOP3A-204ENST00000472959 FAM9BQ8IZU0 186 aa27.33■■□□□ 1.97
TOP3A-204ENST00000472959 TAF7Q15545 349 aaPredicted RBP27.32■■□□□ 1.96
TOP3A-204ENST00000472959 LY75O60449 1722 aa27.32■■□□□ 1.96
TOP3A-204ENST00000472959 BTBD11A6QL63 1104 aa27.31■■□□□ 1.96
TOP3A-204ENST00000472959 KCNQ4P56696 695 aa27.31■■□□□ 1.96
TOP3A-204ENST00000472959 MIER1Q8N108 512 aa27.31■■□□□ 1.96
TOP3A-204ENST00000472959 RBM42Q9BTD8 480 aaKnown RBP27.31■■□□□ 1.96
TOP3A-204ENST00000472959 NUP188Q5SRE5 1749 aa27.3■■□□□ 1.96
TOP3A-204ENST00000472959 PTCD1O75127 700 aaKnown RBP27.3■■□□□ 1.96
TOP3A-204ENST00000472959 ATP6V1AP38606 617 aa27.3■■□□□ 1.96
TOP3A-204ENST00000472959 SLC39A6Q13433 755 aa27.3■■□□□ 1.96
TOP3A-204ENST00000472959 TTC5Q8N0Z6 440 aa27.3■■□□□ 1.96
TOP3A-204ENST00000472959 STK32BQ9NY57 414 aa27.3■■□□□ 1.96
TOP3A-204ENST00000472959 ZNF790Q6PG37 636 aa27.29■■□□□ 1.96
TOP3A-204ENST00000472959 TRIM35Q9UPQ4 493 aa27.29■■□□□ 1.96
TOP3A-204ENST00000472959 THUMPD2Q9BTF0 503 aaKnown RBP27.28■■□□□ 1.96
TOP3A-204ENST00000472959 ANO8Q9HCE9 1232 aaPredicted RBP27.28■■□□□ 1.96
TOP3A-204ENST00000472959 SLC15A2Q16348 729 aa27.27■■□□□ 1.96
TOP3A-204ENST00000472959 NCBP3Q53F19 620 aaKnown RBP27.26■■□□□ 1.95
TOP3A-204ENST00000472959 SLC4A9Q96Q91 983 aa27.26■■□□□ 1.95
TOP3A-204ENST00000472959 ITPK1Q13572 414 aa27.25■■□□□ 1.95
TOP3A-204ENST00000472959 R3HDM1Q15032 1099 aaKnown RBP27.25■■□□□ 1.95
TOP3A-204ENST00000472959 AKT1S1Q96B36 256 aa27.25■■□□□ 1.95
TOP3A-204ENST00000472959 DLG5Q8TDM6 1919 aa27.25■■□□□ 1.95
TOP3A-204ENST00000472959 VIRMAQ69YN4 1812 aaKnown RBP27.25■■□□□ 1.95
TOP3A-204ENST00000472959 VSIG10Q8N0Z9 540 aa27.24■■□□□ 1.95
TOP3A-204ENST00000472959 BABAM1Q9NWV8 329 aa27.24■■□□□ 1.95
TOP3A-204ENST00000472959 PAPPAQ13219 1627 aa27.23■■□□□ 1.95
TOP3A-204ENST00000472959 SIPA1L3O60292 1781 aaPredicted RBP27.22■■□□□ 1.95
TOP3A-204ENST00000472959 ZNF827Q17R98 1081 aa27.22■■□□□ 1.95
TOP3A-204ENST00000472959 CCDC27Q2M243 656 aa27.22■■□□□ 1.95
TOP3A-204ENST00000472959 LINC00116Q8NCU8 138 aa27.22■■□□□ 1.95
TOP3A-204ENST00000472959 ZNF496Q96IT1 587 aaPredicted RBP27.22■■□□□ 1.95
TOP3A-204ENST00000472959 FMNL2Q96PY5 1086 aa27.22■■□□□ 1.95
TOP3A-204ENST00000472959 KCPQ6ZWJ8 1503 aa27.21■■□□□ 1.95
TOP3A-204ENST00000472959 PSDA5PKW4 1024 aaPredicted RBP27.21■■□□□ 1.95
TOP3A-204ENST00000472959 CALD1Q05682 793 aaKnown RBP27.21■■□□□ 1.95
TOP3A-204ENST00000472959 ZNF831Q5JPB2 1677 aa27.21■■□□□ 1.95
TOP3A-204ENST00000472959 KCNQ3O43525 872 aa27.2■■□□□ 1.94
TOP3A-204ENST00000472959 NGEFQ8N5V2 710 aa27.2■■□□□ 1.94
TOP3A-204ENST00000472959 MIS18AQ9NYP9 233 aa27.2■■□□□ 1.94
TOP3A-204ENST00000472959 TFCP2L1Q9NZI6 479 aa27.2■■□□□ 1.94
TOP3A-204ENST00000472959 RC3H1Q5TC82 1133 aaKnown RBP27.18■■□□□ 1.94
TOP3A-204ENST00000472959 AK7Q96M32 723 aa27.18■■□□□ 1.94
TOP3A-204ENST00000472959 TEX13AQ9BXU3 409 aaPredicted RBP27.18■■□□□ 1.94
TOP3A-204ENST00000472959 HEG1Q9ULI3 1381 aa27.18■■□□□ 1.94
TOP3A-204ENST00000472959 DNAJC10Q8IXB1 793 aa27.17■■□□□ 1.94
TOP3A-204ENST00000472959 TSPYL4Q9UJ04 414 aa27.17■■□□□ 1.94
TOP3A-204ENST00000472959 CNTNAP4Q9C0A0 1308 aa27.16■■□□□ 1.94
TOP3A-204ENST00000472959 C5P01031 1676 aa27.15■■□□□ 1.94
TOP3A-204ENST00000472959 CHL1O00533 1208 aa27.15■■□□□ 1.94
TOP3A-204ENST00000472959 WWC1Q8IX03 1113 aa27.15■■□□□ 1.94
TOP3A-204ENST00000472959 STARD3NLO95772 234 aa27.14■■□□□ 1.94
TOP3A-204ENST00000472959 SNRPA1P09661 255 aaKnown RBP27.14■■□□□ 1.94
TOP3A-204ENST00000472959 FLAD1Q8NFF5 587 aa27.14■■□□□ 1.94
TOP3A-204ENST00000472959 CFAP44Q96MT7 982 aa27.14■■□□□ 1.94
TOP3A-204ENST00000472959 UBR2Q8IWV8 1755 aa27.14■■□□□ 1.93
TOP3A-204ENST00000472959 CYP19A1P11511 503 aaPredicted RBP27.13■■□□□ 1.93
TOP3A-204ENST00000472959 EIF4A1P60842 406 aaKnown RBP27.13■■□□□ 1.93
TOP3A-204ENST00000472959 C4BP0C0L5 1744 aa27.13■■□□□ 1.93
TOP3A-204ENST00000472959 CICQ96RK0 1608 aaPredicted RBP27.12■■□□□ 1.93
TOP3A-204ENST00000472959 GNPATO15228 680 aa27.12■■□□□ 1.93
TOP3A-204ENST00000472959 CRKLP46109 303 aaKnown RBP27.12■■□□□ 1.93
TOP3A-204ENST00000472959 IFT57Q9NWB7 429 aa27.12■■□□□ 1.93
TOP3A-204ENST00000472959 LAS1LQ9Y4W2 734 aaKnown RBP27.12■■□□□ 1.93
TOP3A-204ENST00000472959 TAF1LQ8IZX4 1826 aa27.11■■□□□ 1.93
TOP3A-204ENST00000472959 SENP3-EIF4A1A0A087X0R7 540 aa27.11■■□□□ 1.93
TOP3A-204ENST00000472959 GNAI1P63096 354 aa27.11■■□□□ 1.93
TOP3A-204ENST00000472959 PNPLA7Q6ZV29 1317 aa27.11■■□□□ 1.93
TOP3A-204ENST00000472959 ZNF853P0CG23 659 aa27.1■■□□□ 1.93
TOP3A-204ENST00000472959 SSFA2P28290 1259 aa27.1■■□□□ 1.93
TOP3A-204ENST00000472959 CCDC87Q9NVE4 849 aa27.1■■□□□ 1.93
TOP3A-204ENST00000472959 RTCBQ9Y3I0 505 aaKnown RBP27.1■■□□□ 1.93
TOP3A-204ENST00000472959 RPS6KA4O75676 772 aa27.09■■□□□ 1.93
TOP3A-204ENST00000472959 INTS5Q6P9B9 1019 aaKnown RBP27.09■■□□□ 1.93
TOP3A-204ENST00000472959 WDR63Q8IWG1 891 aa27.08■■□□□ 1.93
TOP3A-204ENST00000472959 SALL2Q9Y467 1007 aaPredicted RBP27.08■■□□□ 1.93
TOP3A-204ENST00000472959 IL16Q14005 1332 aa27.08■■□□□ 1.93
TOP3A-204ENST00000472959 TJP1Q07157 1748 aa27.07■■□□□ 1.92
TOP3A-204ENST00000472959 GIGYF1O75420 1035 aaPredicted RBP27.07■■□□□ 1.92
TOP3A-204ENST00000472959 ADRA2BP18089 450 aa27.07■■□□□ 1.92
TOP3A-204ENST00000472959 SLC16A10Q8TF71 515 aa27.07■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms