RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 PRIM1P49642 420 aaKnown RBP12.84□□□□□ -0.35
APTX-216ENST00000472896 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.84□□□□□ -0.35
APTX-216ENST00000472896 ISY1Q9ULR0 285 aaKnown RBP12.84□□□□□ -0.35
APTX-216ENST00000472896 GRIN3BO60391 1043 aa12.83□□□□□ -0.36
APTX-216ENST00000472896 COL23A1Q86Y22 540 aaPredicted RBP12.83□□□□□ -0.36
APTX-216ENST00000472896 PODXL2Q9NZ53 605 aa12.83□□□□□ -0.36
APTX-216ENST00000472896 USP31Q70CQ4 1352 aa12.83□□□□□ -0.36
APTX-216ENST00000472896 TUBGCP6Q96RT7 1819 aa12.83□□□□□ -0.36
APTX-216ENST00000472896 QSER1Q2KHR3 1735 aa12.82□□□□□ -0.36
APTX-216ENST00000472896 ATP10DQ9P241 1426 aa12.82□□□□□ -0.36
APTX-216ENST00000472896 MSL1Q68DK7 614 aa12.81□□□□□ -0.36
APTX-216ENST00000472896 SYTL4Q96C24 671 aaPredicted RBP12.81□□□□□ -0.36
APTX-216ENST00000472896 PDCL3Q9H2J4 239 aa12.81□□□□□ -0.36
APTX-216ENST00000472896 NSD2O96028 1365 aa12.8□□□□□ -0.36
APTX-216ENST00000472896 XRCC6P12956 609 aaKnown RBP eCLIP12.8□□□□□ -0.36
APTX-216ENST00000472896 LTV1Q96GA3 475 aaPredicted RBP12.8□□□□□ -0.36
APTX-216ENST00000472896 SBNO2Q9Y2G9 1366 aa12.8□□□□□ -0.36
APTX-216ENST00000472896 PLIN1O60240 522 aa12.79□□□□□ -0.36
APTX-216ENST00000472896 MRE11P49959 708 aa12.79□□□□□ -0.36
APTX-216ENST00000472896 POLR3GLQ9BT43 218 aa12.79□□□□□ -0.36
APTX-216ENST00000472896 HSPA6P17066 643 aa12.79□□□□□ -0.36
APTX-216ENST00000472896 ZNF526Q8TF50 670 aaPredicted RBP12.79□□□□□ -0.36
APTX-216ENST00000472896 CALD1Q05682 793 aaKnown RBP12.78□□□□□ -0.36
APTX-216ENST00000472896 IP6K1Q92551 441 aa12.78□□□□□ -0.36
APTX-216ENST00000472896 GPBP1L1Q9HC44 474 aaPredicted RBP12.78□□□□□ -0.36
APTX-216ENST00000472896 CCNL1Q9UK58 526 aaPredicted RBP12.78□□□□□ -0.36
APTX-216ENST00000472896 CD163L1Q9NR16 1453 aa12.78□□□□□ -0.36
APTX-216ENST00000472896 LTN1O94822 1766 aa12.78□□□□□ -0.36
APTX-216ENST00000472896 ANKRD36BQ8N2N9 1353 aa12.78□□□□□ -0.36
APTX-216ENST00000472896 CDCA7LQ96GN5 454 aa12.77□□□□□ -0.36
APTX-216ENST00000472896 SLC12A5Q9H2X9 1139 aa12.77□□□□□ -0.36
APTX-216ENST00000472896 FBLN1P23142 703 aa12.76□□□□□ -0.37
APTX-216ENST00000472896 ANTXR1Q9H6X2 564 aa12.76□□□□□ -0.37
APTX-216ENST00000472896 MON2Q7Z3U7 1717 aa12.76□□□□□ -0.37
APTX-216ENST00000472896 GOLGB1Q14789 3259 aaKnown RBP12.76□□□□□ -0.37
APTX-216ENST00000472896 MAPK8IP3Q9UPT6 1336 aa12.76□□□□□ -0.37
APTX-216ENST00000472896 LY75O60449 1722 aa12.76□□□□□ -0.37
APTX-216ENST00000472896 CNGB1Q14028 1251 aaPredicted RBP12.76□□□□□ -0.37
APTX-216ENST00000472896 SKAP1Q86WV1 359 aa12.76□□□□□ -0.37
APTX-216ENST00000472896 CD2APQ9Y5K6 639 aa12.76□□□□□ -0.37
APTX-216ENST00000472896 ADCY9O60503 1353 aa12.76□□□□□ -0.37
APTX-216ENST00000472896 USP54Q70EL1 1684 aa12.75□□□□□ -0.37
APTX-216ENST00000472896 ZCRB1Q8TBF4 217 aaKnown RBP12.75□□□□□ -0.37
APTX-216ENST00000472896 WWC3Q9ULE0 1092 aa12.74□□□□□ -0.37
APTX-216ENST00000472896 ESPNB1AK53 854 aa12.74□□□□□ -0.37
APTX-216ENST00000472896 SMIM5Q71RC9 77 aa12.74□□□□□ -0.37
APTX-216ENST00000472896 KIF3CO14782 793 aa12.73□□□□□ -0.37
APTX-216ENST00000472896 TERF1P54274 439 aa12.73□□□□□ -0.37
APTX-216ENST00000472896 AMIGO3Q86WK7 504 aa12.73□□□□□ -0.37
APTX-216ENST00000472896 MAP7D2Q96T17 732 aa12.73□□□□□ -0.37
APTX-216ENST00000472896 DOT1LQ8TEK3 1739 aa12.73□□□□□ -0.37
APTX-216ENST00000472896 MCM4P33991 863 aa12.72□□□□□ -0.37
APTX-216ENST00000472896 HDGFL2Q7Z4V5 671 aaPredicted RBP12.72□□□□□ -0.37
APTX-216ENST00000472896 CARD11Q9BXL7 1154 aa12.72□□□□□ -0.37
APTX-216ENST00000472896 MYH16Q9H6N6 1097 aa12.72□□□□□ -0.37
APTX-216ENST00000472896 HOXC9P31274 260 aa12.71□□□□□ -0.37
APTX-216ENST00000472896 C20orf194Q5TEA3 1177 aa12.71□□□□□ -0.37
APTX-216ENST00000472896 UPF2Q9HAU5 1272 aaKnown RBP12.71□□□□□ -0.37
APTX-216ENST00000472896 MAP3K19Q56UN5 1328 aa12.71□□□□□ -0.37
APTX-216ENST00000472896 RGPD2P0DJD1 1756 aa12.71□□□□□ -0.38
APTX-216ENST00000472896 MEGF6O75095 1541 aa12.71□□□□□ -0.38
APTX-216ENST00000472896 RGS3P49796 1198 aa12.71□□□□□ -0.38
APTX-216ENST00000472896 EDC4Q6P2E9 1401 aaKnown RBP12.71□□□□□ -0.38
APTX-216ENST00000472896 NBPF6Q5VWK0 638 aa12.7□□□□□ -0.38
APTX-216ENST00000472896 DNAJC5GQ8N7S2 189 aa12.7□□□□□ -0.38
APTX-216ENST00000472896 NBPF4Q96M43 638 aa12.7□□□□□ -0.38
APTX-216ENST00000472896 FAM208AQ9UK61 1670 aaKnown RBP12.7□□□□□ -0.38
APTX-216ENST00000472896 USHBP1Q8N6Y0 703 aa12.69□□□□□ -0.38
APTX-216ENST00000472896 IGSF1Q8N6C5 1336 aa12.69□□□□□ -0.38
APTX-216ENST00000472896 A0A1W2PP64 1363 aa12.69□□□□□ -0.38
APTX-216ENST00000472896 AMPHP49418 695 aa12.69□□□□□ -0.38
APTX-216ENST00000472896 TRIM44Q96DX7 344 aaPredicted RBP12.69□□□□□ -0.38
APTX-216ENST00000472896 DDX11L8A8MPP1 907 aa12.68□□□□□ -0.38
APTX-216ENST00000472896 PTMSP20962 102 aa12.68□□□□□ -0.38
APTX-216ENST00000472896 DUSP27Q5VZP5 1158 aa12.68□□□□□ -0.38
APTX-216ENST00000472896 SLKQ9H2G2 1235 aaPredicted RBP12.68□□□□□ -0.38
APTX-216ENST00000472896 GRPEL1Q9HAV7 217 aa12.68□□□□□ -0.38
APTX-216ENST00000472896 TERF2IPQ9NYB0 399 aa12.68□□□□□ -0.38
APTX-216ENST00000472896 CHMP5Q9NZZ3 219 aa12.68□□□□□ -0.38
APTX-216ENST00000472896 PER1O15534 1290 aaPredicted RBP12.67□□□□□ -0.38
APTX-216ENST00000472896 TRAK2O60296 914 aa12.67□□□□□ -0.38
APTX-216ENST00000472896 AAMPQ13685 434 aa12.67□□□□□ -0.38
APTX-216ENST00000472896 FLAD1Q8NFF5 587 aa12.67□□□□□ -0.38
APTX-216ENST00000472896 ST20-MTHFSA0A0A6YYL1 179 aa12.66□□□□□ -0.38
APTX-216ENST00000472896 MPRIPQ6WCQ1 1025 aa12.66□□□□□ -0.38
APTX-216ENST00000472896 PANK2Q9BZ23 570 aa12.66□□□□□ -0.38
APTX-216ENST00000472896 TBC1D32Q96NH3 1257 aa12.66□□□□□ -0.38
APTX-216ENST00000472896 PALLDQ8WX93 1383 aa12.66□□□□□ -0.38
APTX-216ENST00000472896 C5P01031 1676 aa12.65□□□□□ -0.38
APTX-216ENST00000472896 PHF14O94880 888 aa12.65□□□□□ -0.38
APTX-216ENST00000472896 APLP1P51693 650 aa12.65□□□□□ -0.38
APTX-216ENST00000472896 GOLGA2Q08379 1002 aa12.65□□□□□ -0.38
APTX-216ENST00000472896 RRS1Q15050 365 aaKnown RBP12.65□□□□□ -0.38
APTX-216ENST00000472896 COG3Q96JB2 828 aa12.65□□□□□ -0.38
APTX-216ENST00000472896 RNF39Q9H2S5 420 aa12.65□□□□□ -0.38
APTX-216ENST00000472896 CGNL1Q0VF96 1302 aa12.65□□□□□ -0.38
APTX-216ENST00000472896 ZNF521Q96K83 1311 aa12.65□□□□□ -0.38
APTX-216ENST00000472896 TAF1LQ8IZX4 1826 aa12.65□□□□□ -0.38
APTX-216ENST00000472896 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.64□□□□□ -0.39
APTX-216ENST00000472896 MTERF4Q7Z6M4 381 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms