RNA–Protein interactions for RNA: ENST00000472806.1

CCDC171-205, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-205ENST00000472806 ZNF428Q96B54 188 aa9.79□□□□□ -0.84
CCDC171-205ENST00000472806 ADAMTS13Q76LX8 1427 aa9.79□□□□□ -0.84
CCDC171-205ENST00000472806 AKAP12Q02952 1782 aa9.78□□□□□ -0.84
CCDC171-205ENST00000472806 TSR1Q2NL82 804 aaKnown RBP9.78□□□□□ -0.84
CCDC171-205ENST00000472806 IFFO2Q5TF58 517 aa9.78□□□□□ -0.84
CCDC171-205ENST00000472806 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.78□□□□□ -0.84
CCDC171-205ENST00000472806 ZFRQ96KR1 1074 aaKnown RBP9.78□□□□□ -0.84
CCDC171-205ENST00000472806 IPO9Q96P70 1041 aaKnown RBP9.78□□□□□ -0.84
CCDC171-205ENST00000472806 BACH2Q9BYV9 841 aa9.78□□□□□ -0.84
CCDC171-205ENST00000472806 WBP1LQ9NX94 342 aa9.78□□□□□ -0.84
CCDC171-205ENST00000472806 TBX22Q9Y458 520 aa9.78□□□□□ -0.84
CCDC171-205ENST00000472806 ARHGAP23Q9P227 1491 aa9.78□□□□□ -0.84
CCDC171-205ENST00000472806 PTCH1Q13635 1447 aa9.77□□□□□ -0.85
CCDC171-205ENST00000472806 PRIM1P49642 420 aaKnown RBP9.77□□□□□ -0.85
CCDC171-205ENST00000472806 RIPK4P57078 832 aa9.77□□□□□ -0.85
CCDC171-205ENST00000472806 ZKSCAN2Q63HK3 967 aa9.77□□□□□ -0.85
CCDC171-205ENST00000472806 ANKK1Q8NFD2 765 aa9.77□□□□□ -0.85
CCDC171-205ENST00000472806 CLUAP1Q96AJ1 413 aa9.77□□□□□ -0.85
CCDC171-205ENST00000472806 DDRGK1Q96HY6 314 aa9.77□□□□□ -0.85
CCDC171-205ENST00000472806 POLKQ9UBT6 870 aa9.77□□□□□ -0.85
CCDC171-205ENST00000472806 NOP58Q9Y2X3 529 aaKnown RBP9.77□□□□□ -0.85
CCDC171-205ENST00000472806 FER1L4A9Z1Z3 1794 aa9.77□□□□□ -0.85
CCDC171-205ENST00000472806 C3P01024 1663 aa9.77□□□□□ -0.85
CCDC171-205ENST00000472806 PLEKHG3A1L390 1219 aa9.76□□□□□ -0.85
CCDC171-205ENST00000472806 SOWAHBA6NEL2 793 aa9.76□□□□□ -0.85
CCDC171-205ENST00000472806 IPO8O15397 1037 aaKnown RBP9.76□□□□□ -0.85
CCDC171-205ENST00000472806 FRAT1Q92837 279 aaPredicted RBP9.76□□□□□ -0.85
CCDC171-205ENST00000472806 CHMP4BQ9H444 224 aaKnown RBP9.76□□□□□ -0.85
CCDC171-205ENST00000472806 PIK3R4Q99570 1358 aa9.75□□□□□ -0.85
CCDC171-205ENST00000472806 TOPAZ1Q8N9V7 1692 aa9.75□□□□□ -0.85
CCDC171-205ENST00000472806 TRIM6-TRIM34B2RNG4 842 aa9.75□□□□□ -0.85
CCDC171-205ENST00000472806 NFE2L2Q16236 605 aa9.75□□□□□ -0.85
CCDC171-205ENST00000472806 FTSJ3Q8IY81 847 aaKnown RBP9.75□□□□□ -0.85
CCDC171-205ENST00000472806 BBXQ8WY36 941 aaPredicted RBP9.75□□□□□ -0.85
CCDC171-205ENST00000472806 EPAS1Q99814 870 aa9.75□□□□□ -0.85
CCDC171-205ENST00000472806 TTC21AQ8NDW8 1320 aa9.75□□□□□ -0.85
CCDC171-205ENST00000472806 KIF16BQ96L93 1317 aa9.75□□□□□ -0.85
CCDC171-205ENST00000472806 ROBO2Q9HCK4 1378 aa9.75□□□□□ -0.85
CCDC171-205ENST00000472806 LRRC7Q96NW7 1537 aa9.74□□□□□ -0.85
CCDC171-205ENST00000472806 C3orf80F5H4A9 247 aa9.74□□□□□ -0.85
CCDC171-205ENST00000472806 PPM1GO15355 546 aaPredicted RBP9.74□□□□□ -0.85
CCDC171-205ENST00000472806 PRKAR2BP31323 418 aa9.74□□□□□ -0.85
CCDC171-205ENST00000472806 HAP1P54257 671 aaPredicted RBP9.74□□□□□ -0.85
CCDC171-205ENST00000472806 FAM161AQ3B820 660 aa9.74□□□□□ -0.85
CCDC171-205ENST00000472806 ALDH1L2Q3SY69 923 aa9.74□□□□□ -0.85
CCDC171-205ENST00000472806 RSPH6AQ9H0K4 717 aa9.74□□□□□ -0.85
CCDC171-205ENST00000472806 RWDD1Q9H446 243 aaPredicted RBP9.74□□□□□ -0.85
CCDC171-205ENST00000472806 TSKSQ9UJT2 592 aa9.74□□□□□ -0.85
CCDC171-205ENST00000472806 MAP2P11137 1827 aaKnown RBP9.73□□□□□ -0.85
CCDC171-205ENST00000472806 IL13P35225 146 aa9.73□□□□□ -0.85
CCDC171-205ENST00000472806 GNAI1P63096 354 aa9.73□□□□□ -0.85
CCDC171-205ENST00000472806 NBR1Q14596 966 aa9.73□□□□□ -0.85
CCDC171-205ENST00000472806 NME9Q86XW9 330 aa9.73□□□□□ -0.85
CCDC171-205ENST00000472806 DZIP1LQ8IYY4 767 aaKnown RBP9.73□□□□□ -0.85
CCDC171-205ENST00000472806 SMC4Q9NTJ3 1288 aa9.73□□□□□ -0.85
CCDC171-205ENST00000472806 COG6Q9Y2V7 657 aa9.73□□□□□ -0.85
CCDC171-205ENST00000472806 TTC21BQ7Z4L5 1316 aa9.73□□□□□ -0.85
CCDC171-205ENST00000472806 NRKQ7Z2Y5 1582 aa9.72□□□□□ -0.85
CCDC171-205ENST00000472806 LTKP29376 864 aa9.72□□□□□ -0.85
CCDC171-205ENST00000472806 EXOSC9Q06265 439 aaKnown RBP9.72□□□□□ -0.85
CCDC171-205ENST00000472806 MVPQ14764 893 aaKnown RBP9.72□□□□□ -0.85
CCDC171-205ENST00000472806 LAPTM4BQ86VI4 370 aa9.72□□□□□ -0.85
CCDC171-205ENST00000472806 PANK1Q8TE04 598 aa9.72□□□□□ -0.85
CCDC171-205ENST00000472806 IFT57Q9NWB7 429 aa9.72□□□□□ -0.85
CCDC171-205ENST00000472806 FAM198AQ9UFP1 575 aa9.72□□□□□ -0.85
CCDC171-205ENST00000472806 DDX19BQ9UMR2 479 aa9.72□□□□□ -0.85
CCDC171-205ENST00000472806 USP6P35125 1406 aa9.72□□□□□ -0.85
CCDC171-205ENST00000472806 ANKARQ7Z5J8 1434 aa9.72□□□□□ -0.85
CCDC171-205ENST00000472806 RIMS1Q86UR5 1692 aaKnown RBP9.71□□□□□ -0.85
CCDC171-205ENST00000472806 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.71□□□□□ -0.85
CCDC171-205ENST00000472806 SMAPO00193 183 aa9.71□□□□□ -0.86
CCDC171-205ENST00000472806 BRPF1P55201 1214 aaPredicted RBP9.71□□□□□ -0.86
CCDC171-205ENST00000472806 AMOTL2Q9Y2J4 779 aa9.71□□□□□ -0.86
CCDC171-205ENST00000472806 ACEP12821 1306 aa9.71□□□□□ -0.86
CCDC171-205ENST00000472806 PRR36Q9H6K5 1346 aa9.71□□□□□ -0.86
CCDC171-205ENST00000472806 OVOS2A0A0J9YW53 1432 aa9.71□□□□□ -0.86
CCDC171-205ENST00000472806 OVOS2Q6IE36 1432 aa9.71□□□□□ -0.86
CCDC171-205ENST00000472806 ITGBL1O95965 494 aaPredicted RBP9.7□□□□□ -0.86
CCDC171-205ENST00000472806 EN1Q05925 392 aaPredicted RBP9.7□□□□□ -0.86
CCDC171-205ENST00000472806 ATF7IPQ6VMQ6 1270 aa9.7□□□□□ -0.86
CCDC171-205ENST00000472806 EMILIN1Q9Y6C2 1016 aa9.7□□□□□ -0.86
CCDC171-205ENST00000472806 USP31Q70CQ4 1352 aa9.7□□□□□ -0.86
CCDC171-205ENST00000472806 MAP3K7O43318 606 aa9.69□□□□□ -0.86
CCDC171-205ENST00000472806 CEBPAP49715 358 aaPredicted RBP9.69□□□□□ -0.86
CCDC171-205ENST00000472806 PDIA6Q15084 440 aa9.69□□□□□ -0.86
CCDC171-205ENST00000472806 ARHGAP45Q92619 1136 aa9.69□□□□□ -0.86
CCDC171-205ENST00000472806 PTPRUQ92729 1446 aa9.69□□□□□ -0.86
CCDC171-205ENST00000472806 TSR2Q969E8 191 aaKnown RBP9.69□□□□□ -0.86
CCDC171-205ENST00000472806 SLC26A8Q96RN1 970 aa9.69□□□□□ -0.86
CCDC171-205ENST00000472806 NALCNQ8IZF0 1738 aa9.68□□□□□ -0.86
CCDC171-205ENST00000472806 XRN1Q8IZH2 1706 aaKnown RBP9.68□□□□□ -0.86
CCDC171-205ENST00000472806 CEP170BQ9Y4F5 1589 aaPredicted RBP9.68□□□□□ -0.86
CCDC171-205ENST00000472806 KIF24Q5T7B8 1368 aa9.68□□□□□ -0.86
CCDC171-205ENST00000472806 ONECUT3O60422 494 aaPredicted RBP9.68□□□□□ -0.86
CCDC171-205ENST00000472806 FAM98CQ17RN3 349 aaKnown RBP9.68□□□□□ -0.86
CCDC171-205ENST00000472806 NPM2Q86SE8 214 aaKnown RBP9.68□□□□□ -0.86
CCDC171-205ENST00000472806 SSH1Q8WYL5 1049 aa9.68□□□□□ -0.86
CCDC171-205ENST00000472806 BCL2L13Q9BXK5 485 aa9.68□□□□□ -0.86
CCDC171-205ENST00000472806 DAXXQ9UER7 740 aaPredicted RBP9.68□□□□□ -0.86
CCDC171-205ENST00000472806 ARHGEF10O15013 1369 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms