RNA–Protein interactions for RNA: ENST00000471582.5

COL20A1-205, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 1,924 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-205ENST00000471582 G2E3Q7L622 706 aa23.21■■□□□ 1.31
COL20A1-205ENST00000471582 USHBP1Q8N6Y0 703 aa23.21■■□□□ 1.31
COL20A1-205ENST00000471582 MEIS3Q99687 375 aa23.21■■□□□ 1.31
COL20A1-205ENST00000471582 SPATA31A3Q5VYP0 1347 aa23.21■■□□□ 1.31
COL20A1-205ENST00000471582 CAMTA1Q9Y6Y1 1673 aa23.2■■□□□ 1.3
COL20A1-205ENST00000471582 PXDNLA1KZ92 1463 aa23.2■■□□□ 1.3
COL20A1-205ENST00000471582 PLEKHG5O94827 1062 aa23.2■■□□□ 1.3
COL20A1-205ENST00000471582 RBM25P49756 843 aaKnown RBP23.2■■□□□ 1.3
COL20A1-205ENST00000471582 TBC1D2Q9BYX2 928 aa23.19■■□□□ 1.3
COL20A1-205ENST00000471582 RGPD2P0DJD1 1756 aa23.18■■□□□ 1.3
COL20A1-205ENST00000471582 FLIIQ13045 1269 aa23.18■■□□□ 1.3
COL20A1-205ENST00000471582 SOS2Q07890 1332 aaPredicted RBP23.18■■□□□ 1.3
COL20A1-205ENST00000471582 EIF5BO60841 1220 aaKnown RBP23.18■■□□□ 1.3
COL20A1-205ENST00000471582 HMMRO75330 724 aa23.18■■□□□ 1.3
COL20A1-205ENST00000471582 KDM3BQ7LBC6 1761 aa23.17■■□□□ 1.3
COL20A1-205ENST00000471582 OVOS2A0A0G2JMS6 1433 aa23.17■■□□□ 1.3
COL20A1-205ENST00000471582 NHSL1Q5SYE7 1610 aa23.16■■□□□ 1.3
COL20A1-205ENST00000471582 CHMP4AQ9BY43 222 aa23.16■■□□□ 1.3
COL20A1-205ENST00000471582 CRYBG1Q9Y4K1 1723 aa23.16■■□□□ 1.3
COL20A1-205ENST00000471582 HOXB7P09629 217 aa23.16■■□□□ 1.3
COL20A1-205ENST00000471582 AMOTQ4VCS5 1084 aa23.16■■□□□ 1.3
COL20A1-205ENST00000471582 PLEKHM2Q8IWE5 1019 aa23.16■■□□□ 1.3
COL20A1-205ENST00000471582 F6X3S4 739 aa23.15■■□□□ 1.3
COL20A1-205ENST00000471582 AKAP4Q5JQC9 854 aa23.15■■□□□ 1.3
COL20A1-205ENST00000471582 SLC4A10Q6U841 1118 aa23.15■■□□□ 1.3
COL20A1-205ENST00000471582 ANKRD24Q8TF21 1146 aa23.15■■□□□ 1.3
COL20A1-205ENST00000471582 PLEKHO1Q53GL0 409 aaPredicted RBP23.14■■□□□ 1.3
COL20A1-205ENST00000471582 FKBP5Q13451 457 aaPredicted RBP23.14■■□□□ 1.29
COL20A1-205ENST00000471582 RGPD5Q99666 1765 aa23.13■■□□□ 1.29
COL20A1-205ENST00000471582 GNAI3P08754 354 aa23.13■■□□□ 1.29
COL20A1-205ENST00000471582 LRRC59Q96AG4 307 aaKnown RBP23.13■■□□□ 1.29
COL20A1-205ENST00000471582 ANTXR1Q9H6X2 564 aa23.13■■□□□ 1.29
COL20A1-205ENST00000471582 CDC45O75419 566 aa23.12■■□□□ 1.29
COL20A1-205ENST00000471582 GNAI2P04899 355 aa23.12■■□□□ 1.29
COL20A1-205ENST00000471582 TBC1D9Q6ZT07 1266 aa23.12■■□□□ 1.29
COL20A1-205ENST00000471582 ZC3H6P61129 1189 aaKnown RBP23.12■■□□□ 1.29
COL20A1-205ENST00000471582 TTC22Q5TAA0 569 aa23.11■■□□□ 1.29
COL20A1-205ENST00000471582 HDGFL1Q5TGJ6 251 aa23.11■■□□□ 1.29
COL20A1-205ENST00000471582 ABCC6O95255 1503 aa23.11■■□□□ 1.29
COL20A1-205ENST00000471582 GSPT1P15170 499 aaKnown RBP23.1■■□□□ 1.29
COL20A1-205ENST00000471582 ZNF530Q6P9A1 599 aaPredicted RBP23.1■■□□□ 1.29
COL20A1-205ENST00000471582 EIF4A1P60842 406 aaKnown RBP23.1■■□□□ 1.29
COL20A1-205ENST00000471582 AXIN2Q9Y2T1 843 aa23.1■■□□□ 1.29
COL20A1-205ENST00000471582 ERBB3P21860 1342 aa23.08■■□□□ 1.29
COL20A1-205ENST00000471582 LGR6Q9HBX8 967 aa23.08■■□□□ 1.29
COL20A1-205ENST00000471582 TEFQ10587 303 aa23.07■■□□□ 1.28
COL20A1-205ENST00000471582 SNX21Q969T3 373 aa23.07■■□□□ 1.28
COL20A1-205ENST00000471582 CPDO75976 1380 aa23.07■■□□□ 1.28
COL20A1-205ENST00000471582 ADAMTS7Q9UKP4 1686 aa23.07■■□□□ 1.28
COL20A1-205ENST00000471582 CABLES1Q8TDN4 633 aa23.06■■□□□ 1.28
COL20A1-205ENST00000471582 SLKQ9H2G2 1235 aaPredicted RBP23.06■■□□□ 1.28
COL20A1-205ENST00000471582 C1orf141Q5JVX7 400 aa23.06■■□□□ 1.28
COL20A1-205ENST00000471582 HSCBQ8IWL3 235 aa23.06■■□□□ 1.28
COL20A1-205ENST00000471582 ROBO1Q9Y6N7 1651 aa23.06■■□□□ 1.28
COL20A1-205ENST00000471582 COL18A1P39060 1754 aa23.06■■□□□ 1.28
COL20A1-205ENST00000471582 NECTIN2Q92692 538 aa23.05■■□□□ 1.28
COL20A1-205ENST00000471582 FRAT2O75474 233 aaPredicted RBP23.04■■□□□ 1.28
COL20A1-205ENST00000471582 OSBPL3Q9H4L5 887 aa23.04■■□□□ 1.28
COL20A1-205ENST00000471582 RNMTO43148 476 aaKnown RBP23.04■■□□□ 1.28
COL20A1-205ENST00000471582 C16orf71Q8IYS4 520 aaPredicted RBP23.04■■□□□ 1.28
COL20A1-205ENST00000471582 BTBD11A6QL63 1104 aa23.03■■□□□ 1.28
COL20A1-205ENST00000471582 ATP8B2P98198 1209 aa23.03■■□□□ 1.28
COL20A1-205ENST00000471582 AHDC1Q5TGY3 1603 aaPredicted RBP23.03■■□□□ 1.28
COL20A1-205ENST00000471582 SIPA1L3O60292 1781 aaPredicted RBP23.03■■□□□ 1.28
COL20A1-205ENST00000471582 PLEKHG2Q9H7P9 1386 aa23.03■■□□□ 1.28
COL20A1-205ENST00000471582 ABCA3Q99758 1704 aa23.02■■□□□ 1.28
COL20A1-205ENST00000471582 OTUD7AQ8TE49 926 aaPredicted RBP23.02■■□□□ 1.28
COL20A1-205ENST00000471582 SMARCA5O60264 1052 aaPredicted RBP23.01■■□□□ 1.27
COL20A1-205ENST00000471582 MPRIPQ6WCQ1 1025 aa23.01■■□□□ 1.27
COL20A1-205ENST00000471582 KIF2CQ99661 725 aa23.01■■□□□ 1.27
COL20A1-205ENST00000471582 USP44Q9H0E7 712 aa23■■□□□ 1.27
COL20A1-205ENST00000471582 HEG1Q9ULI3 1381 aa23■■□□□ 1.27
COL20A1-205ENST00000471582 PHAXQ9H814 394 aaKnown RBP23■■□□□ 1.27
COL20A1-205ENST00000471582 NLRP2Q9NX02 1062 aa23■■□□□ 1.27
COL20A1-205ENST00000471582 UBTFL1P0CB47 393 aaPredicted RBP22.99■■□□□ 1.27
COL20A1-205ENST00000471582 CASC1Q6TDU7 716 aa22.99■■□□□ 1.27
COL20A1-205ENST00000471582 RAPGEF4Q8WZA2 1011 aa22.99■■□□□ 1.27
COL20A1-205ENST00000471582 IBTKQ9P2D0 1353 aaPredicted RBP22.99■■□□□ 1.27
COL20A1-205ENST00000471582 CSB-PGBD3P0DP91 1061 aa22.98■■□□□ 1.27
COL20A1-205ENST00000471582 SDSP20132 328 aa22.98■■□□□ 1.27
COL20A1-205ENST00000471582 SRCIN1Q9C0H9 1055 aa22.98■■□□□ 1.27
COL20A1-205ENST00000471582 CHPF2Q9P2E5 772 aa22.98■■□□□ 1.27
COL20A1-205ENST00000471582 LRRCC1Q9C099 1032 aa22.98■■□□□ 1.27
COL20A1-205ENST00000471582 LRRFIP2Q9Y608 721 aaKnown RBP22.98■■□□□ 1.27
COL20A1-205ENST00000471582 APBB1O00213 710 aa22.97■■□□□ 1.27
COL20A1-205ENST00000471582 EIF2S2P20042 333 aaKnown RBP22.97■■□□□ 1.27
COL20A1-205ENST00000471582 SALL3Q9BXA9 1300 aa22.97■■□□□ 1.27
COL20A1-205ENST00000471582 CHMP5Q9NZZ3 219 aa22.97■■□□□ 1.27
COL20A1-205ENST00000471582 PNMA6EA0A0J9YXQ4 647 aa22.96■■□□□ 1.27
COL20A1-205ENST00000471582 KCNQ3O43525 872 aa22.96■■□□□ 1.27
COL20A1-205ENST00000471582 PDE1AP54750 535 aa22.96■■□□□ 1.27
COL20A1-205ENST00000471582 GSE1Q14687 1217 aa22.96■■□□□ 1.27
COL20A1-205ENST00000471582 CHRNA2Q15822 529 aa22.96■■□□□ 1.27
COL20A1-205ENST00000471582 DBF4Q9UBU7 674 aaPredicted RBP22.96■■□□□ 1.27
COL20A1-205ENST00000471582 TATP17735 454 aaPredicted RBP22.95■■□□□ 1.26
COL20A1-205ENST00000471582 DNAAF4Q8WXU2 420 aa22.95■■□□□ 1.26
COL20A1-205ENST00000471582 EXOC6BQ9Y2D4 811 aa22.95■■□□□ 1.26
COL20A1-205ENST00000471582 SSH3Q8TE77 659 aa22.94■■□□□ 1.26
COL20A1-205ENST00000471582 PRDM11Q9NQV5 511 aa22.94■■□□□ 1.26
COL20A1-205ENST00000471582 TUBGCP6Q96RT7 1819 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms