RNA–Protein interactions for RNA: ENST00000471297.1

SMNDC1-204, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 823 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-204ENST00000471297 NUTM2EB1AL46 878 aaPredicted RBP8.35□□□□□ -1.07
SMNDC1-204ENST00000471297 CCER2I3L3R5 266 aa8.35□□□□□ -1.07
SMNDC1-204ENST00000471297 LILRB3O75022 631 aa8.35□□□□□ -1.07
SMNDC1-204ENST00000471297 FMNL1O95466 1100 aaPredicted RBP8.35□□□□□ -1.07
SMNDC1-204ENST00000471297 KCNC4Q03721 635 aa8.35□□□□□ -1.07
SMNDC1-204ENST00000471297 MTMR2Q13614 643 aa8.35□□□□□ -1.07
SMNDC1-204ENST00000471297 QPCTQ16769 361 aa8.35□□□□□ -1.07
SMNDC1-204ENST00000471297 NUTM2DQ5VT03 806 aaPredicted RBP8.35□□□□□ -1.07
SMNDC1-204ENST00000471297 PRPF38BQ5VTL8 546 aaKnown RBP8.35□□□□□ -1.07
SMNDC1-204ENST00000471297 NUTM2AQ8IVF1 878 aaPredicted RBP8.35□□□□□ -1.07
SMNDC1-204ENST00000471297 THAP11Q96EK4 314 aa8.35□□□□□ -1.07
SMNDC1-204ENST00000471297 POLR3GLQ9BT43 218 aa8.35□□□□□ -1.07
SMNDC1-204ENST00000471297 RIMS2Q9UQ26 1411 aa8.35□□□□□ -1.07
SMNDC1-204ENST00000471297 CEBPAP49715 358 aaPredicted RBP8.34□□□□□ -1.07
SMNDC1-204ENST00000471297 RNF19BQ6ZMZ0 732 aa8.34□□□□□ -1.07
SMNDC1-204ENST00000471297 CABLES1Q8TDN4 633 aa8.34□□□□□ -1.07
SMNDC1-204ENST00000471297 SPSB2Q99619 263 aa8.34□□□□□ -1.07
SMNDC1-204ENST00000471297 ZBTB3Q9H5J0 574 aa8.34□□□□□ -1.07
SMNDC1-204ENST00000471297 KDM5AP29375 1690 aaKnown RBP8.34□□□□□ -1.08
SMNDC1-204ENST00000471297 IQGAP1P46940 1657 aa8.34□□□□□ -1.08
SMNDC1-204ENST00000471297 SPDYE5A6NIY4 337 aa8.33□□□□□ -1.08
SMNDC1-204ENST00000471297 RTL5Q5HYW3 569 aaPredicted RBP8.33□□□□□ -1.08
SMNDC1-204ENST00000471297 PUS7Q96PZ0 661 aaKnown RBP8.33□□□□□ -1.08
SMNDC1-204ENST00000471297 TMEM2Q9UHN6 1383 aa8.33□□□□□ -1.08
SMNDC1-204ENST00000471297 SBNO2Q9Y2G9 1366 aa8.33□□□□□ -1.08
SMNDC1-204ENST00000471297 CENPJQ9HC77 1338 aaPredicted RBP8.32□□□□□ -1.08
SMNDC1-204ENST00000471297 ADGRB1O14514 1584 aa8.32□□□□□ -1.08
SMNDC1-204ENST00000471297 ITGBL1O95965 494 aaPredicted RBP8.32□□□□□ -1.08
SMNDC1-204ENST00000471297 PPP2R2DQ66LE6 453 aa8.32□□□□□ -1.08
SMNDC1-204ENST00000471297 TMEM132EQ6IEE7 984 aa8.32□□□□□ -1.08
SMNDC1-204ENST00000471297 THEMISQ8N1K5 641 aaPredicted RBP8.32□□□□□ -1.08
SMNDC1-204ENST00000471297 NKX2-3Q8TAU0 364 aa8.32□□□□□ -1.08
SMNDC1-204ENST00000471297 USB1Q9BQ65 265 aaKnown RBP8.32□□□□□ -1.08
SMNDC1-204ENST00000471297 TRAK1Q9UPV9 953 aa8.32□□□□□ -1.08
SMNDC1-204ENST00000471297 EID1Q9Y6B2 187 aa8.32□□□□□ -1.08
SMNDC1-204ENST00000471297 FER1L4A9Z1Z3 1794 aa8.32□□□□□ -1.08
SMNDC1-204ENST00000471297 C3P01024 1663 aa8.31□□□□□ -1.08
SMNDC1-204ENST00000471297 RETREG3Q86VR2 466 aa8.31□□□□□ -1.08
SMNDC1-204ENST00000471297 ALKQ9UM73 1620 aa8.3□□□□□ -1.08
SMNDC1-204ENST00000471297 TLL1O43897 1013 aa8.3□□□□□ -1.08
SMNDC1-204ENST00000471297 TXNDC2Q86VQ3 553 aa8.3□□□□□ -1.08
SMNDC1-204ENST00000471297 FAM160A2Q8N612 972 aaPredicted RBP8.3□□□□□ -1.08
SMNDC1-204ENST00000471297 SIRT1Q96EB6 747 aa8.3□□□□□ -1.08
SMNDC1-204ENST00000471297 MYO5BQ9ULV0 1848 aa8.3□□□□□ -1.08
SMNDC1-204ENST00000471297 DISP3Q9P2K9 1392 aa8.3□□□□□ -1.08
SMNDC1-204ENST00000471297 MYO3AQ8NEV4 1616 aa8.29□□□□□ -1.08
SMNDC1-204ENST00000471297 ADH1BP00325 375 aa8.29□□□□□ -1.08
SMNDC1-204ENST00000471297 PRR7Q8TB68 274 aa8.29□□□□□ -1.08
SMNDC1-204ENST00000471297 PRKRIP1Q9H875 184 aaPredicted RBP8.29□□□□□ -1.08
SMNDC1-204ENST00000471297 KTN1Q86UP2 1357 aaKnown RBP8.29□□□□□ -1.08
SMNDC1-204ENST00000471297 ADAMTSL3P82987 1691 aa8.29□□□□□ -1.08
SMNDC1-204ENST00000471297 YTHDC2Q9H6S0 1430 aaKnown RBP8.29□□□□□ -1.08
SMNDC1-204ENST00000471297 EVC2Q86UK5 1308 aa8.29□□□□□ -1.08
SMNDC1-204ENST00000471297 LRPPRCP42704 1394 aaKnown RBP8.28□□□□□ -1.08
SMNDC1-204ENST00000471297 ABCC11Q96J66 1382 aa8.28□□□□□ -1.08
SMNDC1-204ENST00000471297 PLEKHG1Q9ULL1 1385 aa8.28□□□□□ -1.08
SMNDC1-204ENST00000471297 CENPBP07199 599 aaPredicted RBP8.28□□□□□ -1.08
SMNDC1-204ENST00000471297 RFC5P40937 340 aa8.28□□□□□ -1.08
SMNDC1-204ENST00000471297 PANK3Q9H999 370 aa8.28□□□□□ -1.08
SMNDC1-204ENST00000471297 POGKQ9P215 609 aa8.28□□□□□ -1.08
SMNDC1-204ENST00000471297 UBR1Q8IWV7 1749 aa8.28□□□□□ -1.08
SMNDC1-204ENST00000471297 ARHGAP23Q9P227 1491 aa8.27□□□□□ -1.09
SMNDC1-204ENST00000471297 CFAP99D6REC4 459 aa8.27□□□□□ -1.09
SMNDC1-204ENST00000471297 PER1O15534 1290 aaPredicted RBP8.27□□□□□ -1.09
SMNDC1-204ENST00000471297 LTKP29376 864 aa8.27□□□□□ -1.09
SMNDC1-204ENST00000471297 RALBP1Q15311 655 aa8.27□□□□□ -1.09
SMNDC1-204ENST00000471297 SLC6A16Q9GZN6 736 aa8.27□□□□□ -1.09
SMNDC1-204ENST00000471297 STK26Q9P289 416 aa8.27□□□□□ -1.09
SMNDC1-204ENST00000471297 SLIT1O75093 1534 aa8.27□□□□□ -1.09
SMNDC1-204ENST00000471297 DLC1Q96QB1 1528 aa8.26□□□□□ -1.09
SMNDC1-204ENST00000471297 MSS51Q4VC12 460 aa8.26□□□□□ -1.09
SMNDC1-204ENST00000471297 TMEM259Q4ZIN3 620 aa8.26□□□□□ -1.09
SMNDC1-204ENST00000471297 TSC1Q92574 1164 aa8.26□□□□□ -1.09
SMNDC1-204ENST00000471297 PLA2G2EQ9NZK7 142 aa8.26□□□□□ -1.09
SMNDC1-204ENST00000471297 TBX22Q9Y458 520 aa8.26□□□□□ -1.09
SMNDC1-204ENST00000471297 GTF3C3Q9Y5Q9 886 aa8.26□□□□□ -1.09
SMNDC1-204ENST00000471297 RIMS1Q86UR5 1692 aaKnown RBP8.26□□□□□ -1.09
SMNDC1-204ENST00000471297 ASXL1Q8IXJ9 1541 aa8.25□□□□□ -1.09
SMNDC1-204ENST00000471297 AP1G2O75843 785 aa8.25□□□□□ -1.09
SMNDC1-204ENST00000471297 CTDSPL2Q05D32 466 aa8.25□□□□□ -1.09
SMNDC1-204ENST00000471297 ANKLE2Q86XL3 938 aa8.25□□□□□ -1.09
SMNDC1-204ENST00000471297 PRAM1Q96QH2 718 aa8.25□□□□□ -1.09
SMNDC1-204ENST00000471297 KNSTRNQ9Y448 316 aa8.25□□□□□ -1.09
SMNDC1-204ENST00000471297 PTPRMP28827 1452 aa8.25□□□□□ -1.09
SMNDC1-204ENST00000471297 ADAMTS13Q76LX8 1427 aa8.24□□□□□ -1.09
SMNDC1-204ENST00000471297 IFFO2Q5TF58 517 aa8.24□□□□□ -1.09
SMNDC1-204ENST00000471297 DESI1Q6ICB0 168 aa8.24□□□□□ -1.09
SMNDC1-204ENST00000471297 METP08581 1390 aa8.23□□□□□ -1.09
SMNDC1-204ENST00000471297 NPC1L1Q9UHC9 1359 aa8.23□□□□□ -1.09
SMNDC1-204ENST00000471297 CEP170BQ9Y4F5 1589 aaPredicted RBP8.23□□□□□ -1.09
SMNDC1-204ENST00000471297 FAM135BQ49AJ0 1406 aa8.23□□□□□ -1.09
SMNDC1-204ENST00000471297 S1PR4O95977 384 aa8.23□□□□□ -1.09
SMNDC1-204ENST00000471297 JUNDP17535 347 aa8.23□□□□□ -1.09
SMNDC1-204ENST00000471297 MMP16P51512 607 aa8.23□□□□□ -1.09
SMNDC1-204ENST00000471297 HELBQ8NG08 1087 aaPredicted RBP8.23□□□□□ -1.09
SMNDC1-204ENST00000471297 YTHDC1Q96MU7 727 aaKnown RBP8.23□□□□□ -1.09
SMNDC1-204ENST00000471297 PRDM9Q9NQV7 894 aa8.23□□□□□ -1.09
SMNDC1-204ENST00000471297 MED14O60244 1454 aa8.23□□□□□ -1.09
SMNDC1-204ENST00000471297 QRICH2Q9H0J4 1663 aa8.23□□□□□ -1.09
SMNDC1-204ENST00000471297 MYBBP1AQ9BQG0 1328 aaKnown RBP8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms