RNA–Protein interactions for RNA: ENST00000470886.1

RRP1B-202, Transcript of ribosomal RNA processing 1B, humanhuman

TSL 2

Gene RRP1B, Length 4,634 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-202ENST00000470886 ERICH2A1L162 156 aa12.5□□□□□ -0.41
RRP1B-202ENST00000470886 PATL2C9JE40 543 aaKnown RBP12.5□□□□□ -0.41
RRP1B-202ENST00000470886 SSFA2P28290 1259 aa12.5□□□□□ -0.41
RRP1B-202ENST00000470886 TTC22Q5TAA0 569 aa12.5□□□□□ -0.41
RRP1B-202ENST00000470886 NUP62CLQ9H1M0 184 aa12.5□□□□□ -0.41
RRP1B-202ENST00000470886 KIF2AO00139 706 aaPredicted RBP12.5□□□□□ -0.41
RRP1B-202ENST00000470886 HS1BP3Q53T59 392 aa12.5□□□□□ -0.41
RRP1B-202ENST00000470886 KIF24Q5T7B8 1368 aa12.5□□□□□ -0.41
RRP1B-202ENST00000470886 FYB1O15117 783 aa12.5□□□□□ -0.41
RRP1B-202ENST00000470886 SYCE3A1L190 88 aa12.49□□□□□ -0.41
RRP1B-202ENST00000470886 ABTB2Q8N961 1025 aa12.49□□□□□ -0.41
RRP1B-202ENST00000470886 RIMS2Q9UQ26 1411 aa12.49□□□□□ -0.41
RRP1B-202ENST00000470886 SRGAP3O43295 1099 aa12.49□□□□□ -0.41
RRP1B-202ENST00000470886 CCDC112Q8NEF3 446 aa12.49□□□□□ -0.41
RRP1B-202ENST00000470886 MED14O60244 1454 aa12.49□□□□□ -0.41
RRP1B-202ENST00000470886 GNAT3A8MTJ3 354 aa12.49□□□□□ -0.41
RRP1B-202ENST00000470886 ANAPC15P60006 121 aa12.49□□□□□ -0.41
RRP1B-202ENST00000470886 SCAND2PQ9GZW5 306 aaPredicted RBP12.49□□□□□ -0.41
RRP1B-202ENST00000470886 EDC4Q6P2E9 1401 aaKnown RBP12.49□□□□□ -0.41
RRP1B-202ENST00000470886 MAP3K11Q16584 847 aa12.49□□□□□ -0.41
RRP1B-202ENST00000470886 CCAR2Q8N163 923 aaKnown RBP12.49□□□□□ -0.41
RRP1B-202ENST00000470886 NOC3LQ8WTT2 800 aaKnown RBP12.49□□□□□ -0.41
RRP1B-202ENST00000470886 QRICH2Q9H0J4 1663 aa12.48□□□□□ -0.41
RRP1B-202ENST00000470886 XBP1P17861 261 aa12.48□□□□□ -0.41
RRP1B-202ENST00000470886 NFXL1Q6ZNB6 911 aa12.48□□□□□ -0.41
RRP1B-202ENST00000470886 SIRT1Q96EB6 747 aa12.48□□□□□ -0.41
RRP1B-202ENST00000470886 ZC3H13Q5T200 1668 aaKnown RBP12.48□□□□□ -0.41
RRP1B-202ENST00000470886 ATP7BP35670 1465 aa12.48□□□□□ -0.41
RRP1B-202ENST00000470886 SPATA32Q96LK8 384 aa12.48□□□□□ -0.41
RRP1B-202ENST00000470886 XRCC6P12956 609 aaKnown RBP eCLIP12.47□□□□□ -0.41
RRP1B-202ENST00000470886 TRHP20396 242 aaPredicted RBP12.47□□□□□ -0.41
RRP1B-202ENST00000470886 NEUROD6Q96NK8 337 aa12.47□□□□□ -0.41
RRP1B-202ENST00000470886 PIP4K2AP48426 406 aaPredicted RBP12.47□□□□□ -0.41
RRP1B-202ENST00000470886 ERCC4Q92889 916 aaPredicted RBP12.47□□□□□ -0.41
RRP1B-202ENST00000470886 JAKMIP1Q96N16 626 aaKnown RBP12.47□□□□□ -0.41
RRP1B-202ENST00000470886 CAVIN2O95810 425 aa12.47□□□□□ -0.41
RRP1B-202ENST00000470886 RRS1Q15050 365 aaKnown RBP12.47□□□□□ -0.41
RRP1B-202ENST00000470886 STK38Q15208 465 aa12.47□□□□□ -0.41
RRP1B-202ENST00000470886 CBFA2T2O43439 604 aa12.47□□□□□ -0.41
RRP1B-202ENST00000470886 SETQ01105 290 aaPredicted RBP12.47□□□□□ -0.41
RRP1B-202ENST00000470886 LIMCH1Q9UPQ0 1083 aa12.47□□□□□ -0.41
RRP1B-202ENST00000470886 SOS1Q07889 1333 aaPredicted RBP12.47□□□□□ -0.41
RRP1B-202ENST00000470886 CEP57L1Q8IYX8 460 aa12.46□□□□□ -0.41
RRP1B-202ENST00000470886 USP32Q8NFA0 1604 aa12.46□□□□□ -0.41
RRP1B-202ENST00000470886 MYO3AQ8NEV4 1616 aa12.46□□□□□ -0.41
RRP1B-202ENST00000470886 RAB3GAP1Q15042 981 aa12.46□□□□□ -0.41
RRP1B-202ENST00000470886 THEMISQ8N1K5 641 aaPredicted RBP12.46□□□□□ -0.41
RRP1B-202ENST00000470886 CWC15Q9P013 229 aaKnown RBP12.46□□□□□ -0.41
RRP1B-202ENST00000470886 DACH1Q9UI36 760 aa12.46□□□□□ -0.41
RRP1B-202ENST00000470886 CCDC9Q9Y3X0 531 aaKnown RBP12.46□□□□□ -0.41
RRP1B-202ENST00000470886 RBM10P98175 930 aaKnown RBP12.46□□□□□ -0.42
RRP1B-202ENST00000470886 AIMP1Q12904 312 aaKnown RBP12.46□□□□□ -0.42
RRP1B-202ENST00000470886 WASHC4Q2M389 1173 aa12.46□□□□□ -0.42
RRP1B-202ENST00000470886 BRMS1Q9HCU9 246 aa12.46□□□□□ -0.42
RRP1B-202ENST00000470886 UGGT1Q9NYU2 1555 aa12.46□□□□□ -0.42
RRP1B-202ENST00000470886 SART3Q15020 963 aaKnown RBP12.46□□□□□ -0.42
RRP1B-202ENST00000470886 CREBRFQ8IUR6 639 aa12.46□□□□□ -0.42
RRP1B-202ENST00000470886 AMOTL1Q8IY63 956 aa12.46□□□□□ -0.42
RRP1B-202ENST00000470886 EXOC6BQ9Y2D4 811 aa12.46□□□□□ -0.42
RRP1B-202ENST00000470886 GLI2P10070 1586 aa12.45□□□□□ -0.42
RRP1B-202ENST00000470886 PPRC1Q5VV67 1664 aaKnown RBP12.45□□□□□ -0.42
RRP1B-202ENST00000470886 HSP90B2PQ58FF3 399 aa12.45□□□□□ -0.42
RRP1B-202ENST00000470886 NOM1Q5C9Z4 860 aaKnown RBP12.45□□□□□ -0.42
RRP1B-202ENST00000470886 ANKRD44Q8N8A2 993 aa12.45□□□□□ -0.42
RRP1B-202ENST00000470886 SPINK5Q9NQ38 1064 aaPredicted RBP12.45□□□□□ -0.42
RRP1B-202ENST00000470886 CTNNA3Q9UI47 895 aa12.45□□□□□ -0.42
RRP1B-202ENST00000470886 PPIP5K1Q6PFW1 1433 aa12.45□□□□□ -0.42
RRP1B-202ENST00000470886 NEMFO60524 1076 aa12.45□□□□□ -0.42
RRP1B-202ENST00000470886 TTC21AQ8NDW8 1320 aa12.45□□□□□ -0.42
RRP1B-202ENST00000470886 DYNC1I1O14576 645 aa12.45□□□□□ -0.42
RRP1B-202ENST00000470886 BRPF1P55201 1214 aaPredicted RBP12.45□□□□□ -0.42
RRP1B-202ENST00000470886 LRSAM1Q6UWE0 723 aa12.45□□□□□ -0.42
RRP1B-202ENST00000470886 THUMPD2Q9BTF0 503 aaKnown RBP12.45□□□□□ -0.42
RRP1B-202ENST00000470886 MBIPQ9NS73 344 aa12.45□□□□□ -0.42
RRP1B-202ENST00000470886 PES1O00541 588 aaKnown RBP12.44□□□□□ -0.42
RRP1B-202ENST00000470886 CTAGE5O15320 804 aa12.44□□□□□ -0.42
RRP1B-202ENST00000470886 RBM25P49756 843 aaKnown RBP12.44□□□□□ -0.42
RRP1B-202ENST00000470886 TAF7Q15545 349 aaPredicted RBP12.44□□□□□ -0.42
RRP1B-202ENST00000470886 PRIMPOLQ96LW4 560 aa12.44□□□□□ -0.42
RRP1B-202ENST00000470886 ZBTB40Q9NUA8 1239 aa12.44□□□□□ -0.42
RRP1B-202ENST00000470886 ZNF530Q6P9A1 599 aaPredicted RBP12.44□□□□□ -0.42
RRP1B-202ENST00000470886 AACSQ86V21 672 aa12.44□□□□□ -0.42
RRP1B-202ENST00000470886 MRPL50Q8N5N7 158 aaKnown RBP12.44□□□□□ -0.42
RRP1B-202ENST00000470886 TBC1D2BQ9UPU7 963 aa12.44□□□□□ -0.42
RRP1B-202ENST00000470886 SMC2O95347 1197 aa12.44□□□□□ -0.42
RRP1B-202ENST00000470886 SPC24Q8NBT2 197 aa12.44□□□□□ -0.42
RRP1B-202ENST00000470886 SMTNL1A8MU46 457 aa12.44□□□□□ -0.42
RRP1B-202ENST00000470886 CASTP20810 708 aaKnown RBP12.44□□□□□ -0.42
RRP1B-202ENST00000470886 FILIP1LQ4L180 1135 aa12.44□□□□□ -0.42
RRP1B-202ENST00000470886 CWC27Q6UX04 472 aaKnown RBP12.44□□□□□ -0.42
RRP1B-202ENST00000470886 ZMYND15Q9H091 742 aa12.44□□□□□ -0.42
RRP1B-202ENST00000470886 CAMSAP1Q5T5Y3 1602 aa12.44□□□□□ -0.42
RRP1B-202ENST00000470886 TAF3Q5VWG9 929 aa12.43□□□□□ -0.42
RRP1B-202ENST00000470886 DDX19AQ9NUU7 478 aaKnown RBP12.43□□□□□ -0.42
RRP1B-202ENST00000470886 CCDC158Q5M9N0 1113 aa12.43□□□□□ -0.42
RRP1B-202ENST00000470886 SMARCE1Q969G3 411 aa12.43□□□□□ -0.42
RRP1B-202ENST00000470886 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.43□□□□□ -0.42
RRP1B-202ENST00000470886 CDKL5O76039 1030 aa12.43□□□□□ -0.42
RRP1B-202ENST00000470886 ZSCAN25Q6NSZ9 544 aa12.43□□□□□ -0.42
RRP1B-202ENST00000470886 DNAJC2Q99543 621 aaKnown RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms