RNA–Protein interactions for RNA: ENST00000469976.2

LDHA-208, Transcript of lactate dehydrogenase A, human

TSL 2

Gene LDHA, Length 656 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LDHA-208	ENST00000469976	NBPF4	Q96M43	638 aa		14	□□□□□ -0.17
LDHA-208	ENST00000469976	ORAI2	Q96SN7	254 aa		14	□□□□□ -0.17
LDHA-208	ENST00000469976	CHMP4A	Q9BY43	222 aa		14	□□□□□ -0.17
LDHA-208	ENST00000469976	HMMR	O75330	724 aa		13.99	□□□□□ -0.17
LDHA-208	ENST00000469976	GC	P02774	474 aa		13.99	□□□□□ -0.17
LDHA-208	ENST00000469976	HOXB7	P09629	217 aa		13.99	□□□□□ -0.17
LDHA-208	ENST00000469976	MFAP1	P55081	439 aa	Known RBP	13.99	□□□□□ -0.17
LDHA-208	ENST00000469976	AMOT	Q4VCS5	1084 aa		13.99	□□□□□ -0.17
LDHA-208	ENST00000469976	PLEKHO1	Q53GL0	409 aa	Predicted RBP	13.99	□□□□□ -0.17
LDHA-208	ENST00000469976	G2E3	Q7L622	706 aa		13.99	□□□□□ -0.17
LDHA-208	ENST00000469976	C19orf44	Q9H6X5	657 aa		13.99	□□□□□ -0.17
LDHA-208	ENST00000469976	RBM25	P49756	843 aa	Known RBP	13.98	□□□□□ -0.17
LDHA-208	ENST00000469976	AKAP4	Q5JQC9	854 aa		13.98	□□□□□ -0.17
LDHA-208	ENST00000469976	KRT28	Q7Z3Y7	464 aa		13.98	□□□□□ -0.17
LDHA-208	ENST00000469976	USHBP1	Q8N6Y0	703 aa		13.98	□□□□□ -0.17
LDHA-208	ENST00000469976	MEIS3	Q99687	375 aa		13.98	□□□□□ -0.17
LDHA-208	ENST00000469976	PLEKHG2	Q9H7P9	1386 aa		13.97	□□□□□ -0.17
LDHA-208	ENST00000469976	DEK	P35659	375 aa	Known RBP	13.97	□□□□□ -0.17
LDHA-208	ENST00000469976	FLII	Q13045	1269 aa		13.97	□□□□□ -0.17
LDHA-208	ENST00000469976	NFKBIB	Q15653	356 aa		13.97	□□□□□ -0.17
LDHA-208	ENST00000469976	PKD1L3	Q7Z443	1732 aa		13.96	□□□□□ -0.17
LDHA-208	ENST00000469976	CDC45	O75419	566 aa		13.96	□□□□□ -0.17
LDHA-208	ENST00000469976	GNAI3	P08754	354 aa		13.96	□□□□□ -0.17
LDHA-208	ENST00000469976	PLEKHM2	Q8IWE5	1019 aa		13.96	□□□□□ -0.17
LDHA-208	ENST00000469976	AK9	Q5TCS8	1911 aa		13.96	□□□□□ -0.18
LDHA-208	ENST00000469976	PXDN	Q92626	1479 aa		13.95	□□□□□ -0.18
LDHA-208	ENST00000469976	GNAI2	P04899	355 aa		13.95	□□□□□ -0.18
LDHA-208	ENST00000469976	ZNF530	Q6P9A1	599 aa	Predicted RBP	13.95	□□□□□ -0.18
LDHA-208	ENST00000469976	TBC1D2	Q9BYX2	928 aa		13.95	□□□□□ -0.18
LDHA-208	ENST00000469976	TTC22	Q5TAA0	569 aa		13.94	□□□□□ -0.18
LDHA-208	ENST00000469976	ANKRD24	Q8TF21	1146 aa		13.94	□□□□□ -0.18
LDHA-208	ENST00000469976	ZBTB7C	A1YPR0	619 aa		13.93	□□□□□ -0.18
LDHA-208	ENST00000469976		F6X3S4	739 aa		13.93	□□□□□ -0.18
LDHA-208	ENST00000469976	EIF4A1	P60842	406 aa	Known RBP	13.93	□□□□□ -0.18
LDHA-208	ENST00000469976	C1QBP	Q07021	282 aa	Known RBP	13.93	□□□□□ -0.18
LDHA-208	ENST00000469976	FKBP5	Q13451	457 aa	Predicted RBP	13.93	□□□□□ -0.18
LDHA-208	ENST00000469976	HDGFL1	Q5TGJ6	251 aa		13.93	□□□□□ -0.18
LDHA-208	ENST00000469976	SLC4A10	Q6U841	1118 aa		13.93	□□□□□ -0.18
LDHA-208	ENST00000469976	LRRC59	Q96AG4	307 aa	Known RBP	13.93	□□□□□ -0.18
LDHA-208	ENST00000469976	TMEM94	Q12767	1356 aa		13.93	□□□□□ -0.18
LDHA-208	ENST00000469976	PARP4	Q9UKK3	1724 aa	Known RBP	13.93	□□□□□ -0.18
LDHA-208	ENST00000469976	RNMT	O43148	476 aa	Known RBP	13.92	□□□□□ -0.18
LDHA-208	ENST00000469976	ATF3	P18847	181 aa		13.92	□□□□□ -0.18
LDHA-208	ENST00000469976	TEF	Q10587	303 aa		13.92	□□□□□ -0.18
LDHA-208	ENST00000469976	TBC1D9	Q6ZT07	1266 aa		13.92	□□□□□ -0.18
LDHA-208	ENST00000469976	SNX21	Q969T3	373 aa		13.92	□□□□□ -0.18
LDHA-208	ENST00000469976	ANTXR1	Q9H6X2	564 aa		13.92	□□□□□ -0.18
LDHA-208	ENST00000469976	C5	P01031	1676 aa		13.91	□□□□□ -0.18
LDHA-208	ENST00000469976	TNS3	Q68CZ2	1445 aa		13.91	□□□□□ -0.18
LDHA-208	ENST00000469976	GSPT1	P15170	499 aa	Known RBP	13.91	□□□□□ -0.18
LDHA-208	ENST00000469976	ATP8B2	P98198	1209 aa		13.91	□□□□□ -0.18
LDHA-208	ENST00000469976	XPC	Q01831	940 aa	Predicted RBP	13.91	□□□□□ -0.18
LDHA-208	ENST00000469976	C1orf141	Q5JVX7	400 aa		13.91	□□□□□ -0.18
LDHA-208	ENST00000469976	LGR6	Q9HBX8	967 aa		13.91	□□□□□ -0.18
LDHA-208	ENST00000469976	HSCB	Q8IWL3	235 aa		13.9	□□□□□ -0.18
LDHA-208	ENST00000469976	OSBPL3	Q9H4L5	887 aa		13.9	□□□□□ -0.18
LDHA-208	ENST00000469976	HEG1	Q9ULI3	1381 aa		13.9	□□□□□ -0.18
LDHA-208	ENST00000469976	ERBB3	P21860	1342 aa		13.9	□□□□□ -0.19
LDHA-208	ENST00000469976	LAMB4	A4D0S4	1761 aa		13.89	□□□□□ -0.19
LDHA-208	ENST00000469976	STRC	Q7RTU9	1775 aa		13.89	□□□□□ -0.19
LDHA-208	ENST00000469976	BTBD11	A6QL63	1104 aa		13.89	□□□□□ -0.19
LDHA-208	ENST00000469976	LMOD2	Q6P5Q4	547 aa		13.89	□□□□□ -0.19
LDHA-208	ENST00000469976	ABCA3	Q99758	1704 aa		13.89	□□□□□ -0.19
LDHA-208	ENST00000469976	NPHP3	Q7Z494	1330 aa		13.89	□□□□□ -0.19
LDHA-208	ENST00000469976	MRC1	P22897	1456 aa		13.88	□□□□□ -0.19
LDHA-208	ENST00000469976	CADPS2	Q86UW7	1296 aa		13.88	□□□□□ -0.19
LDHA-208	ENST00000469976	IBTK	Q9P2D0	1353 aa	Predicted RBP	13.87	□□□□□ -0.19
LDHA-208	ENST00000469976	C16orf71	Q8IYS4	520 aa	Predicted RBP	13.87	□□□□□ -0.19
LDHA-208	ENST00000469976	NECTIN2	Q92692	538 aa		13.87	□□□□□ -0.19
LDHA-208	ENST00000469976	AXIN2	Q9Y2T1	843 aa		13.87	□□□□□ -0.19
LDHA-208	ENST00000469976	SALL3	Q9BXA9	1300 aa		13.87	□□□□□ -0.19
LDHA-208	ENST00000469976	SMARCA5	O60264	1052 aa	Predicted RBP	13.86	□□□□□ -0.19
LDHA-208	ENST00000469976	UBTFL1	P0CB47	393 aa	Predicted RBP	13.86	□□□□□ -0.19
LDHA-208	ENST00000469976	CASC1	Q6TDU7	716 aa		13.86	□□□□□ -0.19
LDHA-208	ENST00000469976	MPRIP	Q6WCQ1	1025 aa		13.86	□□□□□ -0.19
LDHA-208	ENST00000469976	SRCIN1	Q9C0H9	1055 aa		13.86	□□□□□ -0.19
LDHA-208	ENST00000469976	USP44	Q9H0E7	712 aa		13.86	□□□□□ -0.19
LDHA-208	ENST00000469976	SLK	Q9H2G2	1235 aa	Predicted RBP	13.86	□□□□□ -0.19
LDHA-208	ENST00000469976	PHAX	Q9H814	394 aa	Known RBP	13.86	□□□□□ -0.19
LDHA-208	ENST00000469976	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	13.86	□□□□□ -0.19
LDHA-208	ENST00000469976	AOX1	Q06278	1338 aa		13.86	□□□□□ -0.19
LDHA-208	ENST00000469976	CPD	O75976	1380 aa		13.85	□□□□□ -0.19
LDHA-208	ENST00000469976	FRAT2	O75474	233 aa	Predicted RBP	13.85	□□□□□ -0.19
LDHA-208	ENST00000469976	OTUD7A	Q8TE49	926 aa	Predicted RBP	13.85	□□□□□ -0.19
LDHA-208	ENST00000469976	DNAAF4	Q8WXU2	420 aa		13.85	□□□□□ -0.19
LDHA-208	ENST00000469976	KIF2C	Q99661	725 aa		13.85	□□□□□ -0.19
LDHA-208	ENST00000469976	LRRCC1	Q9C099	1032 aa		13.85	□□□□□ -0.19
LDHA-208	ENST00000469976	CHMP5	Q9NZZ3	219 aa		13.85	□□□□□ -0.19
LDHA-208	ENST00000469976	LRRFIP2	Q9Y608	721 aa	Known RBP	13.85	□□□□□ -0.19
LDHA-208	ENST00000469976	KCNQ3	O43525	872 aa		13.84	□□□□□ -0.19
LDHA-208	ENST00000469976	RAB11FIP3	O75154	756 aa		13.84	□□□□□ -0.19
LDHA-208	ENST00000469976	NPM3	O75607	178 aa	Known RBP	13.84	□□□□□ -0.19
LDHA-208	ENST00000469976	TAT	P17735	454 aa	Predicted RBP	13.84	□□□□□ -0.19
LDHA-208	ENST00000469976	EIF2S2	P20042	333 aa	Known RBP	13.84	□□□□□ -0.19
LDHA-208	ENST00000469976	SDS	P20132	328 aa		13.84	□□□□□ -0.19
LDHA-208	ENST00000469976	PDE1A	P54750	535 aa		13.84	□□□□□ -0.19
LDHA-208	ENST00000469976	POLA2	Q14181	598 aa		13.84	□□□□□ -0.19
LDHA-208	ENST00000469976	SSH3	Q8TE77	659 aa		13.84	□□□□□ -0.19
LDHA-208	ENST00000469976	CHPF2	Q9P2E5	772 aa		13.84	□□□□□ -0.19
LDHA-208	ENST00000469976	DBF4	Q9UBU7	674 aa	Predicted RBP	13.84	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms