RNA–Protein interactions for RNA: ENST00000469569.1

FN1-216, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 629 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-216ENST00000469569 PSEN1P49768 467 aa12.25□□□□□ -0.45
FN1-216ENST00000469569 PLEKHO1Q53GL0 409 aaPredicted RBP12.25□□□□□ -0.45
FN1-216ENST00000469569 FAM182BQ5T319 152 aa12.25□□□□□ -0.45
FN1-216ENST00000469569 USHBP1Q8N6Y0 703 aa12.25□□□□□ -0.45
FN1-216ENST00000469569 DDX54Q8TDD1 881 aaKnown RBP12.25□□□□□ -0.45
FN1-216ENST00000469569 LRRC37A3O60309 1634 aa12.25□□□□□ -0.45
FN1-216ENST00000469569 ZNF316A6NFI3 1004 aaPredicted RBP12.24□□□□□ -0.45
FN1-216ENST00000469569 PLSCR1O15162 318 aa12.24□□□□□ -0.45
FN1-216ENST00000469569 HSP90AB1P08238 724 aaKnown RBP12.24□□□□□ -0.45
FN1-216ENST00000469569 IL13P35225 146 aa12.24□□□□□ -0.45
FN1-216ENST00000469569 HS6ST3Q8IZP7 471 aa12.24□□□□□ -0.45
FN1-216ENST00000469569 RGPD1P0DJD0 1748 aa12.23□□□□□ -0.45
FN1-216ENST00000469569 PPP2R1AP30153 589 aa12.23□□□□□ -0.45
FN1-216ENST00000469569 CLCN6P51797 869 aa12.23□□□□□ -0.45
FN1-216ENST00000469569 TRPC6Q9Y210 931 aa12.23□□□□□ -0.45
FN1-216ENST00000469569 CNGB1Q14028 1251 aaPredicted RBP12.22□□□□□ -0.45
FN1-216ENST00000469569 IFNL2Q8IZJ0 200 aa12.22□□□□□ -0.45
FN1-216ENST00000469569 STK24Q9Y6E0 443 aa12.22□□□□□ -0.45
FN1-216ENST00000469569 MEGF6O75095 1541 aa12.21□□□□□ -0.45
FN1-216ENST00000469569 KDRP35968 1356 aa12.21□□□□□ -0.45
FN1-216ENST00000469569 GABBR2O75899 941 aa12.21□□□□□ -0.45
FN1-216ENST00000469569 NKX1-1Q15270 411 aaPredicted RBP12.21□□□□□ -0.45
FN1-216ENST00000469569 SULT6B1Q6IMI4 303 aa12.21□□□□□ -0.45
FN1-216ENST00000469569 PNNQ9H307 717 aaKnown RBP12.21□□□□□ -0.45
FN1-216ENST00000469569 C1orf141Q5JVX7 400 aa12.2□□□□□ -0.46
FN1-216ENST00000469569 DEFB132Q7Z7B7 95 aa12.2□□□□□ -0.46
FN1-216ENST00000469569 EN1Q05925 392 aaPredicted RBP12.19□□□□□ -0.46
FN1-216ENST00000469569 NBPF14Q5TI25 921 aa12.19□□□□□ -0.46
FN1-216ENST00000469569 CAMKK2Q96RR4 588 aa12.19□□□□□ -0.46
FN1-216ENST00000469569 RGPD2P0DJD1 1756 aa12.19□□□□□ -0.46
FN1-216ENST00000469569 U2SURPO15042 1029 aaKnown RBP12.18□□□□□ -0.46
FN1-216ENST00000469569 CYP27B1O15528 508 aa12.18□□□□□ -0.46
FN1-216ENST00000469569 NEFMP07197 916 aa12.18□□□□□ -0.46
FN1-216ENST00000469569 DCAF5Q96JK2 942 aa12.18□□□□□ -0.46
FN1-216ENST00000469569 KAT6BQ8WYB5 2073 aa12.17□□□□□ -0.46
FN1-216ENST00000469569 ERVV-2B6SEH9 535 aa12.17□□□□□ -0.46
FN1-216ENST00000469569 FCHSD2O94868 740 aa12.17□□□□□ -0.46
FN1-216ENST00000469569 PHKG2P15735 406 aa12.17□□□□□ -0.46
FN1-216ENST00000469569 PRIM1P49642 420 aaKnown RBP12.17□□□□□ -0.46
FN1-216ENST00000469569 ZNF530Q6P9A1 599 aaPredicted RBP12.17□□□□□ -0.46
FN1-216ENST00000469569 SP7Q8TDD2 431 aaPredicted RBP12.17□□□□□ -0.46
FN1-216ENST00000469569 BBXQ8WY36 941 aaPredicted RBP12.17□□□□□ -0.46
FN1-216ENST00000469569 SMARCC1Q92922 1105 aaPredicted RBP12.17□□□□□ -0.46
FN1-216ENST00000469569 SYTL4Q96C24 671 aaPredicted RBP12.17□□□□□ -0.46
FN1-216ENST00000469569 ACSBG1Q96GR2 724 aa12.17□□□□□ -0.46
FN1-216ENST00000469569 TMEM106CQ9BVX2 250 aa12.17□□□□□ -0.46
FN1-216ENST00000469569 MYBBP1AQ9BQG0 1328 aaKnown RBP12.16□□□□□ -0.46
FN1-216ENST00000469569 SLC27A3Q5K4L6 730 aa12.16□□□□□ -0.46
FN1-216ENST00000469569 GAS2L2Q8NHY3 880 aa12.16□□□□□ -0.46
FN1-216ENST00000469569 SBF2Q86WG5 1849 aa12.16□□□□□ -0.46
FN1-216ENST00000469569 PKD1L3Q7Z443 1732 aa12.15□□□□□ -0.46
FN1-216ENST00000469569 KCNQ2O43526 872 aa12.15□□□□□ -0.46
FN1-216ENST00000469569 U2AF1L5P0DN76 240 aaPredicted RBP12.15□□□□□ -0.46
FN1-216ENST00000469569 U2AF1Q01081 240 aaKnown RBP eCLIP12.15□□□□□ -0.46
FN1-216ENST00000469569 EZH2Q15910 746 aaKnown RBP12.15□□□□□ -0.46
FN1-216ENST00000469569 AKAP4Q5JQC9 854 aa12.15□□□□□ -0.46
FN1-216ENST00000469569 AEBP1Q8IUX7 1158 aa12.15□□□□□ -0.46
FN1-216ENST00000469569 COL3A1P02461 1466 aaPredicted RBP12.14□□□□□ -0.47
FN1-216ENST00000469569 TNS1Q9HBL0 1735 aaKnown RBP12.14□□□□□ -0.47
FN1-216ENST00000469569 NHSQ6T4R5 1651 aa12.14□□□□□ -0.47
FN1-216ENST00000469569 HMOX1P09601 288 aa12.14□□□□□ -0.47
FN1-216ENST00000469569 PRKRIP1Q9H875 184 aaPredicted RBP12.14□□□□□ -0.47
FN1-216ENST00000469569 TMOD3Q9NYL9 352 aa12.14□□□□□ -0.47
FN1-216ENST00000469569 RGPD3A6NKT7 1758 aaPredicted RBP12.14□□□□□ -0.47
FN1-216ENST00000469569 RGPD4Q7Z3J3 1758 aa12.14□□□□□ -0.47
FN1-216ENST00000469569 TIE1P35590 1138 aa12.13□□□□□ -0.47
FN1-216ENST00000469569 TXNRD1Q16881 649 aa12.13□□□□□ -0.47
FN1-216ENST00000469569 BMP2KQ9NSY1 1161 aaPredicted RBP12.13□□□□□ -0.47
FN1-216ENST00000469569 MPRIPQ6WCQ1 1025 aa12.12□□□□□ -0.47
FN1-216ENST00000469569 TTLL13PA6NNM8 815 aa12.11□□□□□ -0.47
FN1-216ENST00000469569 ANP32CO43423 234 aa12.11□□□□□ -0.47
FN1-216ENST00000469569 CABP4P57796 275 aa12.11□□□□□ -0.47
FN1-216ENST00000469569 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.11□□□□□ -0.47
FN1-216ENST00000469569 GNAT3A8MTJ3 354 aa12.1□□□□□ -0.47
FN1-216ENST00000469569 HTATSF1O43719 755 aaKnown RBP12.1□□□□□ -0.47
FN1-216ENST00000469569 PRKAR2BP31323 418 aa12.1□□□□□ -0.47
FN1-216ENST00000469569 PTF1AQ7RTS3 328 aa12.1□□□□□ -0.47
FN1-216ENST00000469569 PIGBQ92521 554 aa12.1□□□□□ -0.47
FN1-216ENST00000469569 RSPH6AQ9H0K4 717 aa12.1□□□□□ -0.47
FN1-216ENST00000469569 STK32BQ9NY57 414 aa12.1□□□□□ -0.47
FN1-216ENST00000469569 SHANK3Q9BYB0 1731 aa12.1□□□□□ -0.47
FN1-216ENST00000469569 WDR43Q15061 677 aaKnown RBP eCLIP12.09□□□□□ -0.47
FN1-216ENST00000469569 MTHFSDQ2M296 383 aaKnown RBP12.09□□□□□ -0.47
FN1-216ENST00000469569 RTF1Q92541 710 aaKnown RBP12.09□□□□□ -0.47
FN1-216ENST00000469569 CCNL1Q9UK58 526 aaPredicted RBP12.08□□□□□ -0.48
FN1-216ENST00000469569 BTAF1O14981 1849 aa12.08□□□□□ -0.48
FN1-216ENST00000469569 MAPK8IP3Q9UPT6 1336 aa12.08□□□□□ -0.48
FN1-216ENST00000469569 MAP3K5Q99683 1374 aa12.07□□□□□ -0.48
FN1-216ENST00000469569 RNMTO43148 476 aaKnown RBP12.07□□□□□ -0.48
FN1-216ENST00000469569 DOT1LQ8TEK3 1739 aa12.07□□□□□ -0.48
FN1-216ENST00000469569 SLC52A2Q9HAB3 445 aa12.07□□□□□ -0.48
FN1-216ENST00000469569 PALLDQ8WX93 1383 aa12.06□□□□□ -0.48
FN1-216ENST00000469569 TEFQ10587 303 aa12.06□□□□□ -0.48
FN1-216ENST00000469569 R3HDM1Q15032 1099 aaKnown RBP12.06□□□□□ -0.48
FN1-216ENST00000469569 SLC15A2Q16348 729 aa12.06□□□□□ -0.48
FN1-216ENST00000469569 NFATC2IPQ8NCF5 419 aa12.06□□□□□ -0.48
FN1-216ENST00000469569 FLAD1Q8NFF5 587 aa12.06□□□□□ -0.48
FN1-216ENST00000469569 RREB1Q92766 1687 aa12.06□□□□□ -0.48
FN1-216ENST00000469569 LOC102724428A0A0B4J2F2 783 aa12.05□□□□□ -0.48
FN1-216ENST00000469569 SIK1P57059 783 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 151 ms