RNA–Protein interactions for RNA: ENST00000469565.6

LMNA-210, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-210ENST00000469565 PTF1AQ7RTS3 328 aa17.97■□□□□ 0.47
LMNA-210ENST00000469565 FHDC1Q9C0D6 1143 aaPredicted RBP17.97■□□□□ 0.47
LMNA-210ENST00000469565 MAP3K5Q99683 1374 aa17.96■□□□□ 0.47
LMNA-210ENST00000469565 C1QTNF8P60827 252 aa17.96■□□□□ 0.47
LMNA-210ENST00000469565 NKX1-1Q15270 411 aaPredicted RBP17.96■□□□□ 0.47
LMNA-210ENST00000469565 DCAF5Q96JK2 942 aa17.96■□□□□ 0.47
LMNA-210ENST00000469565 LGR6Q9HBX8 967 aa17.96■□□□□ 0.47
LMNA-210ENST00000469565 SALL2Q9Y467 1007 aaPredicted RBP17.96■□□□□ 0.47
LMNA-210ENST00000469565 SCN11AQ9UI33 1791 aa17.96■□□□□ 0.47
LMNA-210ENST00000469565 ITGB4P16144 1822 aa17.95■□□□□ 0.46
LMNA-210ENST00000469565 UTRNP46939 3433 aa17.95■□□□□ 0.46
LMNA-210ENST00000469565 DOT1LQ8TEK3 1739 aa17.95■□□□□ 0.46
LMNA-210ENST00000469565 RNMTO43148 476 aaKnown RBP17.95■□□□□ 0.46
LMNA-210ENST00000469565 PRIM1P49642 420 aaKnown RBP17.95■□□□□ 0.46
LMNA-210ENST00000469565 CHD4Q14839 1912 aa17.94■□□□□ 0.46
LMNA-210ENST00000469565 CABP4P57796 275 aa17.94■□□□□ 0.46
LMNA-210ENST00000469565 DCTN1Q14203 1278 aa17.94■□□□□ 0.46
LMNA-210ENST00000469565 SLC15A2Q16348 729 aa17.94■□□□□ 0.46
LMNA-210ENST00000469565 TXNRD1Q16881 649 aa17.94■□□□□ 0.46
LMNA-210ENST00000469565 MTFR1LQ9H019 292 aa17.94■□□□□ 0.46
LMNA-210ENST00000469565 BCL9O00512 1426 aa17.93■□□□□ 0.46
LMNA-210ENST00000469565 MCM10Q7L590 875 aa17.93■□□□□ 0.46
LMNA-210ENST00000469565 TOGARAM1Q9Y4F4 1720 aa17.92■□□□□ 0.46
LMNA-210ENST00000469565 KDM6AO15550 1401 aaPredicted RBP17.92■□□□□ 0.46
LMNA-210ENST00000469565 IL17REQ8NFR9 667 aa17.92■□□□□ 0.46
LMNA-210ENST00000469565 ERVV-2B6SEH9 535 aa17.91■□□□□ 0.46
LMNA-210ENST00000469565 HTATSF1O43719 755 aaKnown RBP17.91■□□□□ 0.46
LMNA-210ENST00000469565 LMOD3Q0VAK6 560 aa17.91■□□□□ 0.46
LMNA-210ENST00000469565 THUMPD2Q9BTF0 503 aaKnown RBP17.91■□□□□ 0.46
LMNA-210ENST00000469565 TMOD3Q9NYL9 352 aa17.91■□□□□ 0.46
LMNA-210ENST00000469565 TEFQ10587 303 aa17.9■□□□□ 0.46
LMNA-210ENST00000469565 NFATC2IPQ8NCF5 419 aa17.9■□□□□ 0.46
LMNA-210ENST00000469565 NHSQ6T4R5 1651 aa17.9■□□□□ 0.46
LMNA-210ENST00000469565 SGIP1Q9BQI5 828 aa17.89■□□□□ 0.45
LMNA-210ENST00000469565 BTAF1O14981 1849 aa17.88■□□□□ 0.45
LMNA-210ENST00000469565 IFFO2Q5TF58 517 aa17.88■□□□□ 0.45
LMNA-210ENST00000469565 ARXQ96QS3 562 aa17.88■□□□□ 0.45
LMNA-210ENST00000469565 SLC52A2Q9HAB3 445 aa17.88■□□□□ 0.45
LMNA-210ENST00000469565 PIGBQ92521 554 aa17.87■□□□□ 0.45
LMNA-210ENST00000469565 TRIM35Q9UPQ4 493 aa17.87■□□□□ 0.45
LMNA-210ENST00000469565 GPR162Q16538 588 aa17.85■□□□□ 0.45
LMNA-210ENST00000469565 ADAMTS7Q9UKP4 1686 aa17.85■□□□□ 0.45
LMNA-210ENST00000469565 LAS1LQ9Y4W2 734 aaKnown RBP17.85■□□□□ 0.45
LMNA-210ENST00000469565 CEMIPQ8WUJ3 1361 aa17.84■□□□□ 0.45
LMNA-210ENST00000469565 BTBD11A6QL63 1104 aa17.83■□□□□ 0.44
LMNA-210ENST00000469565 GIGYF1O75420 1035 aaPredicted RBP17.83■□□□□ 0.44
LMNA-210ENST00000469565 HNRNPUQ00839 825 aaKnown RBP eCLIP17.83■□□□□ 0.44
LMNA-210ENST00000469565 SLC39A6Q13433 755 aa17.83■□□□□ 0.44
LMNA-210ENST00000469565 TAF7Q15545 349 aaPredicted RBP17.83■□□□□ 0.44
LMNA-210ENST00000469565 MIS18AQ9NYP9 233 aa17.83■□□□□ 0.44
LMNA-210ENST00000469565 ASAP1Q9ULH1 1129 aa17.83■□□□□ 0.44
LMNA-210ENST00000469565 SIPA1L3O60292 1781 aaPredicted RBP17.83■□□□□ 0.44
LMNA-210ENST00000469565 WWC1Q8IX03 1113 aa17.82■□□□□ 0.44
LMNA-210ENST00000469565 CCDC27Q2M243 656 aa17.81■□□□□ 0.44
LMNA-210ENST00000469565 TTC5Q8N0Z6 440 aa17.81■□□□□ 0.44
LMNA-210ENST00000469565 SMARCC1Q92922 1105 aaPredicted RBP17.81■□□□□ 0.44
LMNA-210ENST00000469565 ATG3Q9NT62 314 aa17.81■□□□□ 0.44
LMNA-210ENST00000469565 MRC1P22897 1456 aa17.81■□□□□ 0.44
LMNA-210ENST00000469565 CALD1Q05682 793 aaKnown RBP17.8■□□□□ 0.44
LMNA-210ENST00000469565 NGEFQ8N5V2 710 aa17.8■□□□□ 0.44
LMNA-210ENST00000469565 RBM42Q9BTD8 480 aaKnown RBP17.8■□□□□ 0.44
LMNA-210ENST00000469565 PTCD1O75127 700 aaKnown RBP17.79■□□□□ 0.44
LMNA-210ENST00000469565 TSPYL4Q9UJ04 414 aa17.79■□□□□ 0.44
LMNA-210ENST00000469565 PALLDQ8WX93 1383 aa17.79■□□□□ 0.44
LMNA-210ENST00000469565 KCNQ3O43525 872 aa17.78■□□□□ 0.44
LMNA-210ENST00000469565 NCBP3Q53F19 620 aaKnown RBP17.78■□□□□ 0.44
LMNA-210ENST00000469565 KCNQ4P56696 695 aa17.77■□□□□ 0.44
LMNA-210ENST00000469565 ZNF790Q6PG37 636 aa17.77■□□□□ 0.44
LMNA-210ENST00000469565 KLHL34Q8N239 644 aa17.77■□□□□ 0.44
LMNA-210ENST00000469565 POLD1P28340 1107 aa17.76■□□□□ 0.43
LMNA-210ENST00000469565 GNAI1P63096 354 aa17.76■□□□□ 0.43
LMNA-210ENST00000469565 WDR63Q8IWG1 891 aa17.76■□□□□ 0.43
LMNA-210ENST00000469565 PELP1Q8IZL8 1130 aaKnown RBP17.76■□□□□ 0.43
LMNA-210ENST00000469565 SLC16A10Q8TF71 515 aa17.76■□□□□ 0.43
LMNA-210ENST00000469565 YTHDC1Q96MU7 727 aaKnown RBP17.76■□□□□ 0.43
LMNA-210ENST00000469565 PAPPAQ13219 1627 aa17.76■□□□□ 0.43
LMNA-210ENST00000469565 LY75O60449 1722 aa17.75■□□□□ 0.43
LMNA-210ENST00000469565 ZNF827Q17R98 1081 aa17.75■□□□□ 0.43
LMNA-210ENST00000469565 CFAP44Q96MT7 982 aa17.75■□□□□ 0.43
LMNA-210ENST00000469565 CCNL1Q9UK58 526 aaPredicted RBP17.75■□□□□ 0.43
LMNA-210ENST00000469565 KDM3BQ7LBC6 1761 aa17.74■□□□□ 0.43
LMNA-210ENST00000469565 LOC102724428A0A0B4J2F2 783 aa17.74■□□□□ 0.43
LMNA-210ENST00000469565 CHL1O00533 1208 aa17.74■□□□□ 0.43
LMNA-210ENST00000469565 ATP6V1AP38606 617 aa17.74■□□□□ 0.43
LMNA-210ENST00000469565 SIK1P57059 783 aa17.74■□□□□ 0.43
LMNA-210ENST00000469565 IFT57Q9NWB7 429 aa17.74■□□□□ 0.43
LMNA-210ENST00000469565 ZNF496Q96IT1 587 aaPredicted RBP17.73■□□□□ 0.43
LMNA-210ENST00000469565 FMNL2Q96PY5 1086 aa17.73■□□□□ 0.43
LMNA-210ENST00000469565 MBIPQ9NS73 344 aa17.73■□□□□ 0.43
LMNA-210ENST00000469565 GOLGA2Q08379 1002 aa17.72■□□□□ 0.43
LMNA-210ENST00000469565 TSR2Q969E8 191 aaKnown RBP17.72■□□□□ 0.43
LMNA-210ENST00000469565 LRRC4BQ9NT99 713 aa17.72■□□□□ 0.43
LMNA-210ENST00000469565 BABAM1Q9NWV8 329 aa17.72■□□□□ 0.43
LMNA-210ENST00000469565 IL16Q14005 1332 aa17.72■□□□□ 0.43
LMNA-210ENST00000469565 UBR2Q8IWV8 1755 aa17.71■□□□□ 0.43
LMNA-210ENST00000469565 ZNF853P0CG23 659 aa17.71■□□□□ 0.43
LMNA-210ENST00000469565 EIF4A1P60842 406 aaKnown RBP17.71■□□□□ 0.43
LMNA-210ENST00000469565 ZNF521Q96K83 1311 aa17.71■□□□□ 0.42
LMNA-210ENST00000469565 SLC27A3Q5K4L6 730 aa17.7■□□□□ 0.42
LMNA-210ENST00000469565 AKT1S1Q96B36 256 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms