RNA–Protein interactions for RNA: ENST00000469154.5

SMARCD3-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-205ENST00000469154 PEAK1Q9H792 1746 aa17.57■□□□□ 0.4
SMARCD3-205ENST00000469154 GSPT1P15170 499 aaKnown RBP17.57■□□□□ 0.4
SMARCD3-205ENST00000469154 EIF4A2Q14240 407 aaKnown RBP17.57■□□□□ 0.4
SMARCD3-205ENST00000469154 TTC22Q5TAA0 569 aa17.57■□□□□ 0.4
SMARCD3-205ENST00000469154 RPAP2Q8IXW5 612 aaPredicted RBP17.57■□□□□ 0.4
SMARCD3-205ENST00000469154 CERKQ8TCT0 537 aa17.57■□□□□ 0.4
SMARCD3-205ENST00000469154 ARHGEF10O15013 1369 aa17.56■□□□□ 0.4
SMARCD3-205ENST00000469154 ARXQ96QS3 562 aa17.56■□□□□ 0.4
SMARCD3-205ENST00000469154 PTPRCP08575 1304 aa17.56■□□□□ 0.4
SMARCD3-205ENST00000469154 CHL1O00533 1208 aa17.55■□□□□ 0.4
SMARCD3-205ENST00000469154 CD2BP2O95400 341 aaKnown RBP17.55■□□□□ 0.4
SMARCD3-205ENST00000469154 SULT6B1Q6IMI4 303 aa17.55■□□□□ 0.4
SMARCD3-205ENST00000469154 NHSL1Q5SYE7 1610 aa17.55■□□□□ 0.4
SMARCD3-205ENST00000469154 RABEP1Q15276 862 aa17.55■□□□□ 0.4
SMARCD3-205ENST00000469154 RRAGDQ9NQL2 400 aaPredicted RBP17.55■□□□□ 0.4
SMARCD3-205ENST00000469154 NFAT5O94916 1531 aa17.54■□□□□ 0.4
SMARCD3-205ENST00000469154 FLT4P35916 1363 aa17.54■□□□□ 0.4
SMARCD3-205ENST00000469154 ZC3H6P61129 1189 aaKnown RBP17.54■□□□□ 0.4
SMARCD3-205ENST00000469154 AEBP1Q8IUX7 1158 aa17.54■□□□□ 0.4
SMARCD3-205ENST00000469154 GRPEL1Q9HAV7 217 aa17.54■□□□□ 0.4
SMARCD3-205ENST00000469154 MED1Q15648 1581 aaPredicted RBP17.54■□□□□ 0.4
SMARCD3-205ENST00000469154 SLIT3O75094 1523 aa17.53■□□□□ 0.4
SMARCD3-205ENST00000469154 HOXC9P31274 260 aa17.53■□□□□ 0.4
SMARCD3-205ENST00000469154 PANK2Q9BZ23 570 aa17.53■□□□□ 0.4
SMARCD3-205ENST00000469154 CEP85Q6P2H3 762 aa17.52■□□□□ 0.4
SMARCD3-205ENST00000469154 ARHGEF25Q86VW2 580 aa17.52■□□□□ 0.4
SMARCD3-205ENST00000469154 RTL1A6NKG5 1358 aa17.52■□□□□ 0.4
SMARCD3-205ENST00000469154 RBM42Q9BTD8 480 aaKnown RBP17.52■□□□□ 0.4
SMARCD3-205ENST00000469154 CASC1Q6TDU7 716 aa17.51■□□□□ 0.39
SMARCD3-205ENST00000469154 CLEC17AQ6ZS10 378 aa17.51■□□□□ 0.39
SMARCD3-205ENST00000469154 GAS2L2Q8NHY3 880 aa17.51■□□□□ 0.39
SMARCD3-205ENST00000469154 LRRC59Q96AG4 307 aaKnown RBP17.51■□□□□ 0.39
SMARCD3-205ENST00000469154 CRB1P82279 1406 aa17.5■□□□□ 0.39
SMARCD3-205ENST00000469154 GOLGA6L22H0YM25 854 aa17.5■□□□□ 0.39
SMARCD3-205ENST00000469154 IP6K1Q92551 441 aa17.5■□□□□ 0.39
SMARCD3-205ENST00000469154 LTV1Q96GA3 475 aaPredicted RBP17.5■□□□□ 0.39
SMARCD3-205ENST00000469154 FOXD4L1Q9NU39 408 aa17.5■□□□□ 0.39
SMARCD3-205ENST00000469154 MCM10Q7L590 875 aa17.49■□□□□ 0.39
SMARCD3-205ENST00000469154 AHDC1Q5TGY3 1603 aaPredicted RBP17.49■□□□□ 0.39
SMARCD3-205ENST00000469154 LTN1O94822 1766 aa17.49■□□□□ 0.39
SMARCD3-205ENST00000469154 KRT24Q2M2I5 525 aa17.49■□□□□ 0.39
SMARCD3-205ENST00000469154 USP26Q9BXU7 913 aa17.48■□□□□ 0.39
SMARCD3-205ENST00000469154 SSFA2P28290 1259 aa17.48■□□□□ 0.39
SMARCD3-205ENST00000469154 C16orf71Q8IYS4 520 aaPredicted RBP17.48■□□□□ 0.39
SMARCD3-205ENST00000469154 AK9Q5TCS8 1911 aa17.47■□□□□ 0.39
SMARCD3-205ENST00000469154 HMMRO75330 724 aa17.47■□□□□ 0.39
SMARCD3-205ENST00000469154 PHRF1Q9P1Y6 1649 aaKnown RBP17.46■□□□□ 0.39
SMARCD3-205ENST00000469154 CHRNA2Q15822 529 aa17.46■□□□□ 0.39
SMARCD3-205ENST00000469154 MEIS3Q99687 375 aa17.46■□□□□ 0.39
SMARCD3-205ENST00000469154 AXIN2Q9Y2T1 843 aa17.46■□□□□ 0.39
SMARCD3-205ENST00000469154 FAM208AQ9UK61 1670 aaKnown RBP17.46■□□□□ 0.39
SMARCD3-205ENST00000469154 N4BP2Q86UW6 1770 aaPredicted RBP17.46■□□□□ 0.38
SMARCD3-205ENST00000469154 SDSP20132 328 aa17.46■□□□□ 0.38
SMARCD3-205ENST00000469154 NUCB2P80303 420 aa17.46■□□□□ 0.38
SMARCD3-205ENST00000469154 TUBGCP6Q96RT7 1819 aa17.46■□□□□ 0.38
SMARCD3-205ENST00000469154 LRRC37A3O60309 1634 aa17.45■□□□□ 0.38
SMARCD3-205ENST00000469154 CLCN1P35523 988 aa17.45■□□□□ 0.38
SMARCD3-205ENST00000469154 IBTKQ9P2D0 1353 aaPredicted RBP17.45■□□□□ 0.38
SMARCD3-205ENST00000469154 CCT4P50991 539 aaKnown RBP17.45■□□□□ 0.38
SMARCD3-205ENST00000469154 OTUD7AQ8TE49 926 aaPredicted RBP17.45■□□□□ 0.38
SMARCD3-205ENST00000469154 CACNA1FO60840 1977 aa17.44■□□□□ 0.38
SMARCD3-205ENST00000469154 CRYBG1Q9Y4K1 1723 aa17.44■□□□□ 0.38
SMARCD3-205ENST00000469154 REC8O95072 547 aa17.44■□□□□ 0.38
SMARCD3-205ENST00000469154 BAG4O95429 457 aaKnown RBP17.44■□□□□ 0.38
SMARCD3-205ENST00000469154 EYA1Q99502 592 aa17.44■□□□□ 0.38
SMARCD3-205ENST00000469154 PHLPP1O60346 1717 aa17.44■□□□□ 0.38
SMARCD3-205ENST00000469154 SLC4A2P04920 1241 aa17.43■□□□□ 0.38
SMARCD3-205ENST00000469154 SMARCA5O60264 1052 aaPredicted RBP17.43■□□□□ 0.38
SMARCD3-205ENST00000469154 ST18O60284 1047 aa17.43■□□□□ 0.38
SMARCD3-205ENST00000469154 KLHL40Q2TBA0 621 aa17.43■□□□□ 0.38
SMARCD3-205ENST00000469154 PRDM11Q9NQV5 511 aa17.43■□□□□ 0.38
SMARCD3-205ENST00000469154 RTF1Q92541 710 aaKnown RBP17.42■□□□□ 0.38
SMARCD3-205ENST00000469154 CWC22Q9HCG8 908 aaKnown RBP17.42■□□□□ 0.38
SMARCD3-205ENST00000469154 CPDO75976 1380 aa17.42■□□□□ 0.38
SMARCD3-205ENST00000469154 KDRP35968 1356 aa17.42■□□□□ 0.38
SMARCD3-205ENST00000469154 GAS2L3Q86XJ1 694 aa17.42■□□□□ 0.38
SMARCD3-205ENST00000469154 OSBPL3Q9H4L5 887 aa17.42■□□□□ 0.38
SMARCD3-205ENST00000469154 COL16A1Q07092 1604 aaPredicted RBP17.42■□□□□ 0.38
SMARCD3-205ENST00000469154 ANKRD24Q8TF21 1146 aa17.41■□□□□ 0.38
SMARCD3-205ENST00000469154 TSPYL4Q9UJ04 414 aa17.41■□□□□ 0.38
SMARCD3-205ENST00000469154 IGSF1Q8N6C5 1336 aa17.41■□□□□ 0.38
SMARCD3-205ENST00000469154 ERC2O15083 957 aa17.41■□□□□ 0.38
SMARCD3-205ENST00000469154 APBB1O00213 710 aa17.4■□□□□ 0.38
SMARCD3-205ENST00000469154 CYP2E1P05181 493 aaPredicted RBP17.4■□□□□ 0.38
SMARCD3-205ENST00000469154 USHBP1Q8N6Y0 703 aa17.4■□□□□ 0.38
SMARCD3-205ENST00000469154 MTHFSDQ2M296 383 aaKnown RBP17.4■□□□□ 0.38
SMARCD3-205ENST00000469154 NBPF6Q5VWK0 638 aa17.39■□□□□ 0.37
SMARCD3-205ENST00000469154 NBPF4Q96M43 638 aa17.39■□□□□ 0.37
SMARCD3-205ENST00000469154 DDX49Q9Y6V7 483 aaKnown RBP17.39■□□□□ 0.37
SMARCD3-205ENST00000469154 ERBB3P21860 1342 aa17.38■□□□□ 0.37
SMARCD3-205ENST00000469154 GNAI2P04899 355 aa17.38■□□□□ 0.37
SMARCD3-205ENST00000469154 TRIM44Q96DX7 344 aaPredicted RBP17.38■□□□□ 0.37
SMARCD3-205ENST00000469154 ABCA3Q99758 1704 aa17.38■□□□□ 0.37
SMARCD3-205ENST00000469154 HTATSF1O43719 755 aaKnown RBP17.38■□□□□ 0.37
SMARCD3-205ENST00000469154 PDE1AP54750 535 aa17.38■□□□□ 0.37
SMARCD3-205ENST00000469154 SLC4A10Q6U841 1118 aa17.38■□□□□ 0.37
SMARCD3-205ENST00000469154 G2E3Q7L622 706 aa17.38■□□□□ 0.37
SMARCD3-205ENST00000469154 STK31Q9BXU1 1019 aa17.38■□□□□ 0.37
SMARCD3-205ENST00000469154 ESPNB1AK53 854 aa17.37■□□□□ 0.37
SMARCD3-205ENST00000469154 RGPD5Q99666 1765 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms