RNA–Protein interactions for RNA: ENST00000468647.5

FRMD1-206, Transcript of FERM domain containing 1, humanhuman

TSL 2

Gene FRMD1, Length 3,821 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRMD1-206ENST00000468647 USP19O94966 1318 aa13.58□□□□□ -0.24
FRMD1-206ENST00000468647 PROSER3Q2NL68 480 aa13.58□□□□□ -0.24
FRMD1-206ENST00000468647 KLHDC4Q8TBB5 520 aa13.58□□□□□ -0.24
FRMD1-206ENST00000468647 MAP3K2Q9Y2U5 619 aa13.58□□□□□ -0.24
FRMD1-206ENST00000468647 NPHP4O75161 1426 aaPredicted RBP13.57□□□□□ -0.24
FRMD1-206ENST00000468647 BCL11BQ9C0K0 894 aaPredicted RBP13.57□□□□□ -0.24
FRMD1-206ENST00000468647 LRRC7Q96NW7 1537 aa13.56□□□□□ -0.24
FRMD1-206ENST00000468647 TAF7LQ5H9L4 462 aa13.56□□□□□ -0.24
FRMD1-206ENST00000468647 SPATA31D1Q6ZQQ2 1576 aa13.56□□□□□ -0.24
FRMD1-206ENST00000468647 PNMA6EA0A0J9YXQ4 647 aa13.56□□□□□ -0.24
FRMD1-206ENST00000468647 NPHP1O15259 732 aa13.56□□□□□ -0.24
FRMD1-206ENST00000468647 NEXNQ0ZGT2 675 aa13.56□□□□□ -0.24
FRMD1-206ENST00000468647 NFKBIBQ15653 356 aa13.56□□□□□ -0.24
FRMD1-206ENST00000468647 MYD88Q99836 296 aa13.56□□□□□ -0.24
FRMD1-206ENST00000468647 NBPF7P0C2Y1 421 aaPredicted RBP13.55□□□□□ -0.24
FRMD1-206ENST00000468647 SIRT2Q8IXJ6 389 aa13.55□□□□□ -0.24
FRMD1-206ENST00000468647 SLAIN2Q9P270 581 aa13.55□□□□□ -0.24
FRMD1-206ENST00000468647 PPP1R42Q7Z4L9 355 aa13.55□□□□□ -0.24
FRMD1-206ENST00000468647 ACSBG1Q96GR2 724 aa13.55□□□□□ -0.24
FRMD1-206ENST00000468647 SPG7Q9UQ90 795 aa13.55□□□□□ -0.24
FRMD1-206ENST00000468647 PNPLA6Q8IY17 1366 aa13.54□□□□□ -0.24
FRMD1-206ENST00000468647 NEUROD6Q96NK8 337 aa13.54□□□□□ -0.24
FRMD1-206ENST00000468647 NPHP3Q7Z494 1330 aa13.54□□□□□ -0.24
FRMD1-206ENST00000468647 MAP3K5Q99683 1374 aa13.54□□□□□ -0.24
FRMD1-206ENST00000468647 GNAI3P08754 354 aa13.54□□□□□ -0.24
FRMD1-206ENST00000468647 CCT4P50991 539 aaKnown RBP13.54□□□□□ -0.24
FRMD1-206ENST00000468647 COPS6Q7L5N1 327 aa13.54□□□□□ -0.24
FRMD1-206ENST00000468647 DNAAF4Q8WXU2 420 aa13.54□□□□□ -0.24
FRMD1-206ENST00000468647 GCC1Q96CN9 775 aa13.54□□□□□ -0.24
FRMD1-206ENST00000468647 CEP85Q6P2H3 762 aa13.53□□□□□ -0.24
FRMD1-206ENST00000468647 ARHGEF25Q86VW2 580 aa13.53□□□□□ -0.24
FRMD1-206ENST00000468647 RNMTO43148 476 aaKnown RBP13.53□□□□□ -0.24
FRMD1-206ENST00000468647 ZNF853P0CG23 659 aa13.53□□□□□ -0.24
FRMD1-206ENST00000468647 CCDC8Q9H0W5 538 aaPredicted RBP13.53□□□□□ -0.24
FRMD1-206ENST00000468647 IGSF1Q8N6C5 1336 aa13.53□□□□□ -0.24
FRMD1-206ENST00000468647 NUCB1Q02818 461 aa13.53□□□□□ -0.24
FRMD1-206ENST00000468647 TBC1D9Q6ZT07 1266 aa13.53□□□□□ -0.24
FRMD1-206ENST00000468647 IL27Q8NEV9 243 aa13.53□□□□□ -0.24
FRMD1-206ENST00000468647 XAGE3Q8WTP9 111 aa13.53□□□□□ -0.24
FRMD1-206ENST00000468647 KIAA1210Q9ULL0 1709 aa13.53□□□□□ -0.24
FRMD1-206ENST00000468647 AATKQ6ZMQ8 1374 aa13.53□□□□□ -0.24
FRMD1-206ENST00000468647 GPTP24298 496 aa13.52□□□□□ -0.24
FRMD1-206ENST00000468647 ZNF496Q96IT1 587 aaPredicted RBP13.52□□□□□ -0.25
FRMD1-206ENST00000468647 LRRCC1Q9C099 1032 aa13.52□□□□□ -0.25
FRMD1-206ENST00000468647 BTG4Q9NY30 223 aa13.52□□□□□ -0.25
FRMD1-206ENST00000468647 USP16Q9Y5T5 823 aa13.52□□□□□ -0.25
FRMD1-206ENST00000468647 IFIT2P09913 472 aaKnown RBP13.52□□□□□ -0.25
FRMD1-206ENST00000468647 KIAA0232Q92628 1395 aa13.52□□□□□ -0.25
FRMD1-206ENST00000468647 HDAC1Q13547 482 aaPredicted RBP13.51□□□□□ -0.25
FRMD1-206ENST00000468647 AKAP4Q5JQC9 854 aa13.51□□□□□ -0.25
FRMD1-206ENST00000468647 UPF3BQ9BZI7 483 aaKnown RBP13.51□□□□□ -0.25
FRMD1-206ENST00000468647 DDX58O95786 925 aaKnown RBP13.51□□□□□ -0.25
FRMD1-206ENST00000468647 LARP1Q6PKG0 1096 aaKnown RBP13.51□□□□□ -0.25
FRMD1-206ENST00000468647 UBE3BQ7Z3V4 1068 aa13.51□□□□□ -0.25
FRMD1-206ENST00000468647 NDUFB9Q9Y6M9 179 aa13.51□□□□□ -0.25
FRMD1-206ENST00000468647 FGD1P98174 961 aa13.51□□□□□ -0.25
FRMD1-206ENST00000468647 SMC5Q8IY18 1101 aa13.51□□□□□ -0.25
FRMD1-206ENST00000468647 TBC1D2Q9BYX2 928 aa13.51□□□□□ -0.25
FRMD1-206ENST00000468647 CDC45O75419 566 aa13.5□□□□□ -0.25
FRMD1-206ENST00000468647 AMOTQ4VCS5 1084 aa13.5□□□□□ -0.25
FRMD1-206ENST00000468647 G3BP1Q13283 466 aaKnown RBP eCLIP13.5□□□□□ -0.25
FRMD1-206ENST00000468647 IFNL2Q8IZJ0 200 aa13.5□□□□□ -0.25
FRMD1-206ENST00000468647 KIF13AQ9H1H9 1805 aa13.5□□□□□ -0.25
FRMD1-206ENST00000468647 FAM182BQ5T319 152 aa13.5□□□□□ -0.25
FRMD1-206ENST00000468647 GORABQ5T7V8 394 aa13.5□□□□□ -0.25
FRMD1-206ENST00000468647 DBF4Q9UBU7 674 aaPredicted RBP13.5□□□□□ -0.25
FRMD1-206ENST00000468647 A1BGP04217 495 aa13.49□□□□□ -0.25
FRMD1-206ENST00000468647 CWC27Q6UX04 472 aaKnown RBP13.49□□□□□ -0.25
FRMD1-206ENST00000468647 KIAA1211Q6ZU35 1233 aa13.49□□□□□ -0.25
FRMD1-206ENST00000468647 RPAP2Q8IXW5 612 aaPredicted RBP13.49□□□□□ -0.25
FRMD1-206ENST00000468647 DNAJC2Q99543 621 aaKnown RBP13.49□□□□□ -0.25
FRMD1-206ENST00000468647 KCNQ4P56696 695 aa13.49□□□□□ -0.25
FRMD1-206ENST00000468647 EIF4A1P60842 406 aaKnown RBP13.49□□□□□ -0.25
FRMD1-206ENST00000468647 SDSP20132 328 aa13.48□□□□□ -0.25
FRMD1-206ENST00000468647 ANKRD44Q8N8A2 993 aa13.48□□□□□ -0.25
FRMD1-206ENST00000468647 AACSQ86V21 672 aa13.48□□□□□ -0.25
FRMD1-206ENST00000468647 RIMS1Q86UR5 1692 aaKnown RBP13.48□□□□□ -0.25
FRMD1-206ENST00000468647 BRINP3Q76B58 766 aa13.48□□□□□ -0.25
FRMD1-206ENST00000468647 ARHGAP45Q92619 1136 aa13.48□□□□□ -0.25
FRMD1-206ENST00000468647 MAP2P11137 1827 aaKnown RBP13.47□□□□□ -0.25
FRMD1-206ENST00000468647 BOLA2Q9H3K6 86 aa13.47□□□□□ -0.25
FRMD1-206ENST00000468647 CDK12Q9NYV4 1490 aaPredicted RBP13.47□□□□□ -0.25
FRMD1-206ENST00000468647 PPFIA3O75145 1194 aa13.47□□□□□ -0.25
FRMD1-206ENST00000468647 ZNF790Q6PG37 636 aa13.47□□□□□ -0.25
FRMD1-206ENST00000468647 IFT172Q9UG01 1749 aa13.47□□□□□ -0.25
FRMD1-206ENST00000468647 NEK4P51957 841 aa13.47□□□□□ -0.25
FRMD1-206ENST00000468647 BICDL1Q6ZP65 573 aa13.47□□□□□ -0.25
FRMD1-206ENST00000468647 PLEKHM2Q8IWE5 1019 aa13.47□□□□□ -0.25
FRMD1-206ENST00000468647 CLASRPQ8N2M8 674 aaKnown RBP13.47□□□□□ -0.25
FRMD1-206ENST00000468647 ZCRB1Q8TBF4 217 aaKnown RBP13.47□□□□□ -0.25
FRMD1-206ENST00000468647 PTPRCP08575 1304 aa13.47□□□□□ -0.25
FRMD1-206ENST00000468647 PIK3R4Q99570 1358 aa13.46□□□□□ -0.25
FRMD1-206ENST00000468647 A0A087WZG4 1122 aa13.46□□□□□ -0.25
FRMD1-206ENST00000468647 DIAPH3Q9NSV4 1193 aa13.46□□□□□ -0.25
FRMD1-206ENST00000468647 ERBB3P21860 1342 aa13.46□□□□□ -0.25
FRMD1-206ENST00000468647 MX1P20591 662 aa13.46□□□□□ -0.26
FRMD1-206ENST00000468647 AAMPQ13685 434 aa13.46□□□□□ -0.26
FRMD1-206ENST00000468647 INTS3Q68E01 1043 aaKnown RBP13.46□□□□□ -0.26
FRMD1-206ENST00000468647 USP44Q9H0E7 712 aa13.46□□□□□ -0.26
FRMD1-206ENST00000468647 FOSBP53539 338 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms