RNA–Protein interactions for RNA: ENST00000467837.5

NCSTN-211, Transcript of nicastrin, humanhuman

TSL 5

Gene NCSTN, Length 726 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-211ENST00000467837 SLC52A2Q9HAB3 445 aa21.47■■□□□ 1.03
NCSTN-211ENST00000467837 TAF1LQ8IZX4 1826 aa21.46■■□□□ 1.03
NCSTN-211ENST00000467837 HTATSF1O43719 755 aaKnown RBP21.46■■□□□ 1.03
NCSTN-211ENST00000467837 TMPOP42166 694 aaKnown RBP21.46■■□□□ 1.03
NCSTN-211ENST00000467837 MIER1Q8N108 512 aa21.46■■□□□ 1.03
NCSTN-211ENST00000467837 PALLDQ8WX93 1383 aa21.46■■□□□ 1.03
NCSTN-211ENST00000467837 CABP4P57796 275 aa21.45■■□□□ 1.02
NCSTN-211ENST00000467837 PROM2Q8N271 834 aa21.45■■□□□ 1.02
NCSTN-211ENST00000467837 C5P01031 1676 aa21.44■■□□□ 1.02
NCSTN-211ENST00000467837 NFATC2IPQ8NCF5 419 aa21.44■■□□□ 1.02
NCSTN-211ENST00000467837 KCPQ6ZWJ8 1503 aa21.44■■□□□ 1.02
NCSTN-211ENST00000467837 KDM3BQ7LBC6 1761 aa21.43■■□□□ 1.02
NCSTN-211ENST00000467837 MCM10Q7L590 875 aa21.43■■□□□ 1.02
NCSTN-211ENST00000467837 TJP1Q07157 1748 aa21.42■■□□□ 1.02
NCSTN-211ENST00000467837 DCTN1Q14203 1278 aa21.42■■□□□ 1.02
NCSTN-211ENST00000467837 TXNRD1Q16881 649 aa21.42■■□□□ 1.02
NCSTN-211ENST00000467837 ATG3Q9NT62 314 aa21.42■■□□□ 1.02
NCSTN-211ENST00000467837 ASAP1Q9ULH1 1129 aa21.42■■□□□ 1.02
NCSTN-211ENST00000467837 RRP7AQ9Y3A4 280 aaKnown RBP21.42■■□□□ 1.02
NCSTN-211ENST00000467837 COL5A3P25940 1745 aaPredicted RBP21.41■■□□□ 1.02
NCSTN-211ENST00000467837 RIPK4P57078 832 aa21.41■■□□□ 1.02
NCSTN-211ENST00000467837 RTF1Q92541 710 aaKnown RBP21.41■■□□□ 1.02
NCSTN-211ENST00000467837 SMARCC1Q92922 1105 aaPredicted RBP21.41■■□□□ 1.02
NCSTN-211ENST00000467837 APAF1O14727 1248 aa21.4■■□□□ 1.02
NCSTN-211ENST00000467837 TEFQ10587 303 aa21.39■■□□□ 1.01
NCSTN-211ENST00000467837 FAM9BQ8IZU0 186 aa21.39■■□□□ 1.01
NCSTN-211ENST00000467837 LRRC4BQ9NT99 713 aa21.39■■□□□ 1.01
NCSTN-211ENST00000467837 TRIM35Q9UPQ4 493 aa21.39■■□□□ 1.01
NCSTN-211ENST00000467837 TUBGCP6Q96RT7 1819 aa21.39■■□□□ 1.01
NCSTN-211ENST00000467837 LMOD3Q0VAK6 560 aa21.38■■□□□ 1.01
NCSTN-211ENST00000467837 SLC27A3Q5K4L6 730 aa21.38■■□□□ 1.01
NCSTN-211ENST00000467837 THUMPD2Q9BTF0 503 aaKnown RBP21.38■■□□□ 1.01
NCSTN-211ENST00000467837 QSER1Q2KHR3 1735 aa21.37■■□□□ 1.01
NCSTN-211ENST00000467837 C4BP0C0L5 1744 aa21.36■■□□□ 1.01
NCSTN-211ENST00000467837 LOC102724428A0A0B4J2F2 783 aa21.35■■□□□ 1.01
NCSTN-211ENST00000467837 SIK1P57059 783 aa21.35■■□□□ 1.01
NCSTN-211ENST00000467837 NEUROD2Q15784 382 aa21.35■■□□□ 1.01
NCSTN-211ENST00000467837 SLC4A9Q96Q91 983 aa21.35■■□□□ 1.01
NCSTN-211ENST00000467837 CCNL1Q9UK58 526 aaPredicted RBP21.35■■□□□ 1.01
NCSTN-211ENST00000467837 SLC39A6Q13433 755 aa21.34■■□□□ 1.01
NCSTN-211ENST00000467837 NCBP3Q53F19 620 aaKnown RBP21.34■■□□□ 1.01
NCSTN-211ENST00000467837 ANO8Q9HCE9 1232 aaPredicted RBP21.34■■□□□ 1.01
NCSTN-211ENST00000467837 KCNQ4P56696 695 aa21.33■■□□□ 1.01
NCSTN-211ENST00000467837 CCDC27Q2M243 656 aa21.32■■□□□ 1
NCSTN-211ENST00000467837 ZNF790Q6PG37 636 aa21.32■■□□□ 1
NCSTN-211ENST00000467837 UBR3Q6ZT12 1888 aa21.32■■□□□ 1
NCSTN-211ENST00000467837 LAMB4A4D0S4 1761 aa21.31■■□□□ 1
NCSTN-211ENST00000467837 MYH14Q7Z406 1995 aaKnown RBP21.31■■□□□ 1
NCSTN-211ENST00000467837 BTBD11A6QL63 1104 aa21.31■■□□□ 1
NCSTN-211ENST00000467837 ITPK1Q13572 414 aa21.31■■□□□ 1
NCSTN-211ENST00000467837 TAF7Q15545 349 aaPredicted RBP21.31■■□□□ 1
NCSTN-211ENST00000467837 CASZ1Q86V15 1759 aa21.31■■□□□ 1
NCSTN-211ENST00000467837 KCNQ3O43525 872 aa21.3■■□□□ 1
NCSTN-211ENST00000467837 PTCD1O75127 700 aaKnown RBP21.29■■□□□ 1
NCSTN-211ENST00000467837 ZNF827Q17R98 1081 aa21.29■■□□□ 1
NCSTN-211ENST00000467837 HEG1Q9ULI3 1381 aa21.28■■□□□ 1
NCSTN-211ENST00000467837 ATP6V1AP38606 617 aa21.28■■□□□ 1
NCSTN-211ENST00000467837 TTC5Q8N0Z6 440 aa21.28■■□□□ 1
NCSTN-211ENST00000467837 LINC00116Q8NCU8 138 aa21.28■■□□□ 1
NCSTN-211ENST00000467837 AKT1S1Q96B36 256 aa21.28■■□□□ 1
NCSTN-211ENST00000467837 ZNF496Q96IT1 587 aaPredicted RBP21.28■■□□□ 1
NCSTN-211ENST00000467837 RBM42Q9BTD8 480 aaKnown RBP21.28■■□□□ 1
NCSTN-211ENST00000467837 SENP3-EIF4A1A0A087X0R7 540 aa21.27■■□□□ 1
NCSTN-211ENST00000467837 VSIG10Q8N0Z9 540 aa21.27■■□□□ 1
NCSTN-211ENST00000467837 BABAM1Q9NWV8 329 aa21.27■■□□□ 1
NCSTN-211ENST00000467837 MIS18AQ9NYP9 233 aa21.26■□□□□ 0.99
NCSTN-211ENST00000467837 WWC1Q8IX03 1113 aa21.25■□□□□ 0.99
NCSTN-211ENST00000467837 CHL1O00533 1208 aa21.24■□□□□ 0.99
NCSTN-211ENST00000467837 ZNF853P0CG23 659 aa21.24■□□□□ 0.99
NCSTN-211ENST00000467837 SLC15A2Q16348 729 aa21.24■□□□□ 0.99
NCSTN-211ENST00000467837 NBPF14Q5TI25 921 aa21.24■□□□□ 0.99
NCSTN-211ENST00000467837 NGEFQ8N5V2 710 aa21.24■□□□□ 0.99
NCSTN-211ENST00000467837 FMNL2Q96PY5 1086 aa21.24■□□□□ 0.99
NCSTN-211ENST00000467837 SRCAPQ6ZRS2 3230 aa21.24■□□□□ 0.99
NCSTN-211ENST00000467837 CNTNAP4Q9C0A0 1308 aa21.24■□□□□ 0.99
NCSTN-211ENST00000467837 DNAJC10Q8IXB1 793 aa21.23■□□□□ 0.99
NCSTN-211ENST00000467837 CFAP44Q96MT7 982 aa21.23■□□□□ 0.99
NCSTN-211ENST00000467837 STK32BQ9NY57 414 aa21.23■□□□□ 0.99
NCSTN-211ENST00000467837 TSPYL4Q9UJ04 414 aa21.23■□□□□ 0.99
NCSTN-211ENST00000467837 ZNF521Q96K83 1311 aa21.23■□□□□ 0.99
NCSTN-211ENST00000467837 C4AP0C0L4 1744 aa21.22■□□□□ 0.99
NCSTN-211ENST00000467837 HMGB2P26583 209 aaKnown RBP21.22■□□□□ 0.99
NCSTN-211ENST00000467837 IFT57Q9NWB7 429 aa21.22■□□□□ 0.99
NCSTN-211ENST00000467837 EIF4A1P60842 406 aaKnown RBP21.21■□□□□ 0.99
NCSTN-211ENST00000467837 CALD1Q05682 793 aaKnown RBP21.21■□□□□ 0.99
NCSTN-211ENST00000467837 R3HDM1Q15032 1099 aaKnown RBP21.21■□□□□ 0.99
NCSTN-211ENST00000467837 AMIGO3Q86WK7 504 aa21.2■□□□□ 0.98
NCSTN-211ENST00000467837 IL16Q14005 1332 aa21.2■□□□□ 0.98
NCSTN-211ENST00000467837 PSDA5PKW4 1024 aaPredicted RBP21.19■□□□□ 0.98
NCSTN-211ENST00000467837 CYP19A1P11511 503 aaPredicted RBP21.19■□□□□ 0.98
NCSTN-211ENST00000467837 RC3H1Q5TC82 1133 aaKnown RBP21.19■□□□□ 0.98
NCSTN-211ENST00000467837 MBIPQ9NS73 344 aa21.19■□□□□ 0.98
NCSTN-211ENST00000467837 PNPLA7Q6ZV29 1317 aa21.19■□□□□ 0.98
NCSTN-211ENST00000467837 COL24A1Q17RW2 1714 aa21.18■□□□□ 0.98
NCSTN-211ENST00000467837 PRAMEF22A3QJZ6 481 aa21.18■□□□□ 0.98
NCSTN-211ENST00000467837 CRKLP46109 303 aaKnown RBP21.18■□□□□ 0.98
NCSTN-211ENST00000467837 GNAI1P63096 354 aa21.18■□□□□ 0.98
NCSTN-211ENST00000467837 SALL2Q9Y467 1007 aaPredicted RBP21.18■□□□□ 0.98
NCSTN-211ENST00000467837 SNRPA1P09661 255 aaKnown RBP21.17■□□□□ 0.98
NCSTN-211ENST00000467837 WDR63Q8IWG1 891 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms