RNA–Protein interactions for RNA: ENST00000467717.5

VARS2-204, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 863 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-204ENST00000467717 ADAMTS7Q9UKP4 1686 aa22.32■■□□□ 1.16
VARS2-204ENST00000467717 BTBD11A6QL63 1104 aa22.31■■□□□ 1.16
VARS2-204ENST00000467717 WDR63Q8IWG1 891 aa22.31■■□□□ 1.16
VARS2-204ENST00000467717 ZNF521Q96K83 1311 aa22.3■■□□□ 1.16
VARS2-204ENST00000467717 SF3B2Q13435 895 aaKnown RBP22.29■■□□□ 1.16
VARS2-204ENST00000467717 BABAM1Q9NWV8 329 aa22.29■■□□□ 1.16
VARS2-204ENST00000467717 IL16Q14005 1332 aa22.29■■□□□ 1.16
VARS2-204ENST00000467717 APBA3O96018 575 aa22.28■■□□□ 1.16
VARS2-204ENST00000467717 SMARCC1Q92922 1105 aaPredicted RBP22.28■■□□□ 1.16
VARS2-204ENST00000467717 CFAP44Q96MT7 982 aa22.28■■□□□ 1.16
VARS2-204ENST00000467717 ATG3Q9NT62 314 aa22.28■■□□□ 1.16
VARS2-204ENST00000467717 IFT57Q9NWB7 429 aa22.28■■□□□ 1.16
VARS2-204ENST00000467717 TOGARAM1Q9Y4F4 1720 aa22.28■■□□□ 1.16
VARS2-204ENST00000467717 CHL1O00533 1208 aa22.27■■□□□ 1.16
VARS2-204ENST00000467717 GNAI1P63096 354 aa22.27■■□□□ 1.16
VARS2-204ENST00000467717 MIS18AQ9NYP9 233 aa22.27■■□□□ 1.16
VARS2-204ENST00000467717 ASAP1Q9ULH1 1129 aa22.27■■□□□ 1.16
VARS2-204ENST00000467717 DOT1LQ8TEK3 1739 aa22.26■■□□□ 1.15
VARS2-204ENST00000467717 SLC39A6Q13433 755 aa22.26■■□□□ 1.15
VARS2-204ENST00000467717 ZNF790Q6PG37 636 aa22.26■■□□□ 1.15
VARS2-204ENST00000467717 TTC5Q8N0Z6 440 aa22.26■■□□□ 1.15
VARS2-204ENST00000467717 TSPYL4Q9UJ04 414 aa22.26■■□□□ 1.15
VARS2-204ENST00000467717 LAS1LQ9Y4W2 734 aaKnown RBP22.26■■□□□ 1.15
VARS2-204ENST00000467717 NHSQ6T4R5 1651 aa22.26■■□□□ 1.15
VARS2-204ENST00000467717 SCN11AQ9UI33 1791 aa22.25■■□□□ 1.15
VARS2-204ENST00000467717 ZNF853P0CG23 659 aa22.25■■□□□ 1.15
VARS2-204ENST00000467717 ZBED9Q6R2W3 1325 aa22.25■■□□□ 1.15
VARS2-204ENST00000467717 DLG5Q8TDM6 1919 aa22.24■■□□□ 1.15
VARS2-204ENST00000467717 GOLGA2Q08379 1002 aa22.24■■□□□ 1.15
VARS2-204ENST00000467717 PALLDQ8WX93 1383 aa22.24■■□□□ 1.15
VARS2-204ENST00000467717 PSDA5PKW4 1024 aaPredicted RBP22.23■■□□□ 1.15
VARS2-204ENST00000467717 PLSCR1O15162 318 aa22.23■■□□□ 1.15
VARS2-204ENST00000467717 KCNQ3O43525 872 aa22.22■■□□□ 1.15
VARS2-204ENST00000467717 KAT6BQ8WYB5 2073 aa22.21■■□□□ 1.15
VARS2-204ENST00000467717 BAG6P46379 1132 aa22.21■■□□□ 1.15
VARS2-204ENST00000467717 MYH16Q9H6N6 1097 aa22.21■■□□□ 1.15
VARS2-204ENST00000467717 MBIPQ9NS73 344 aa22.21■■□□□ 1.15
VARS2-204ENST00000467717 E9PSI1 815 aa22.2■■□□□ 1.14
VARS2-204ENST00000467717 PTCD1O75127 700 aaKnown RBP22.2■■□□□ 1.14
VARS2-204ENST00000467717 YTHDC1Q96MU7 727 aaKnown RBP22.2■■□□□ 1.14
VARS2-204ENST00000467717 FMNL2Q96PY5 1086 aa22.2■■□□□ 1.14
VARS2-204ENST00000467717 SPINK5Q9NQ38 1064 aaPredicted RBP22.2■■□□□ 1.14
VARS2-204ENST00000467717 LOC102724428A0A0B4J2F2 783 aa22.19■■□□□ 1.14
VARS2-204ENST00000467717 SIK1P57059 783 aa22.19■■□□□ 1.14
VARS2-204ENST00000467717 ZNF496Q96IT1 587 aaPredicted RBP22.19■■□□□ 1.14
VARS2-204ENST00000467717 RBM42Q9BTD8 480 aaKnown RBP22.19■■□□□ 1.14
VARS2-204ENST00000467717 SBF2Q86WG5 1849 aa22.19■■□□□ 1.14
VARS2-204ENST00000467717 EIF4A1P60842 406 aaKnown RBP22.18■■□□□ 1.14
VARS2-204ENST00000467717 EN1Q05925 392 aaPredicted RBP22.17■■□□□ 1.14
VARS2-204ENST00000467717 SLFN5Q08AF3 891 aa22.17■■□□□ 1.14
VARS2-204ENST00000467717 SLC27A3Q5K4L6 730 aa22.17■■□□□ 1.14
VARS2-204ENST00000467717 VSIG10Q8N0Z9 540 aa22.17■■□□□ 1.14
VARS2-204ENST00000467717 TSR2Q969E8 191 aaKnown RBP22.17■■□□□ 1.14
VARS2-204ENST00000467717 CDCA7LQ96GN5 454 aa22.17■■□□□ 1.14
VARS2-204ENST00000467717 CAMKK2Q96RR4 588 aa22.17■■□□□ 1.14
VARS2-204ENST00000467717 ITGB4P16144 1822 aa22.17■■□□□ 1.14
VARS2-204ENST00000467717 FANCIQ9NVI1 1328 aa22.16■■□□□ 1.14
VARS2-204ENST00000467717 TXNRD1Q16881 649 aa22.16■■□□□ 1.14
VARS2-204ENST00000467717 CCNL1Q9UK58 526 aaPredicted RBP22.16■■□□□ 1.14
VARS2-204ENST00000467717 ATP6V1AP38606 617 aa22.15■■□□□ 1.14
VARS2-204ENST00000467717 PROM2Q8N271 834 aa22.15■■□□□ 1.14
VARS2-204ENST00000467717 SLC4A9Q96Q91 983 aa22.15■■□□□ 1.14
VARS2-204ENST00000467717 BTAF1O14981 1849 aa22.15■■□□□ 1.14
VARS2-204ENST00000467717 HEG1Q9ULI3 1381 aa22.14■■□□□ 1.14
VARS2-204ENST00000467717 SNRPA1P09661 255 aaKnown RBP22.14■■□□□ 1.13
VARS2-204ENST00000467717 EZH2Q15910 746 aaKnown RBP22.14■■□□□ 1.13
VARS2-204ENST00000467717 KCPQ6ZWJ8 1503 aa22.14■■□□□ 1.13
VARS2-204ENST00000467717 SIPA1L3O60292 1781 aaPredicted RBP22.14■■□□□ 1.13
VARS2-204ENST00000467717 HMGB2P26583 209 aaKnown RBP22.13■■□□□ 1.13
VARS2-204ENST00000467717 TRMT2AQ8IZ69 625 aaKnown RBP22.13■■□□□ 1.13
VARS2-204ENST00000467717 TNS1Q9HBL0 1735 aaKnown RBP22.12■■□□□ 1.13
VARS2-204ENST00000467717 GIGYF1O75420 1035 aaPredicted RBP22.12■■□□□ 1.13
VARS2-204ENST00000467717 TEX13AQ9BXU3 409 aaPredicted RBP22.12■■□□□ 1.13
VARS2-204ENST00000467717 PAPPAQ13219 1627 aa22.11■■□□□ 1.13
VARS2-204ENST00000467717 ITPK1Q13572 414 aa22.11■■□□□ 1.13
VARS2-204ENST00000467717 LRRC4BQ9NT99 713 aa22.11■■□□□ 1.13
VARS2-204ENST00000467717 KCNQ4P56696 695 aa22.1■■□□□ 1.13
VARS2-204ENST00000467717 KRT24Q2M2I5 525 aa22.1■■□□□ 1.13
VARS2-204ENST00000467717 DUSP27Q5VZP5 1158 aa22.1■■□□□ 1.13
VARS2-204ENST00000467717 DNAJC10Q8IXB1 793 aa22.1■■□□□ 1.13
VARS2-204ENST00000467717 VIRMAQ69YN4 1812 aaKnown RBP22.09■■□□□ 1.13
VARS2-204ENST00000467717 HOXB7P09629 217 aa22.09■■□□□ 1.13
VARS2-204ENST00000467717 C8orf58Q8NAV2 365 aa22.09■■□□□ 1.13
VARS2-204ENST00000467717 STARD3NLO95772 234 aa22.08■■□□□ 1.13
VARS2-204ENST00000467717 EXOSC9Q06265 439 aaKnown RBP22.08■■□□□ 1.13
VARS2-204ENST00000467717 SOS1Q07889 1333 aaPredicted RBP22.07■■□□□ 1.12
VARS2-204ENST00000467717 KDM3BQ7LBC6 1761 aa22.07■■□□□ 1.12
VARS2-204ENST00000467717 PRAMEF22A3QJZ6 481 aa22.07■■□□□ 1.12
VARS2-204ENST00000467717 ELL2O00472 640 aaPredicted RBP22.07■■□□□ 1.12
VARS2-204ENST00000467717 USP16Q9Y5T5 823 aa22.07■■□□□ 1.12
VARS2-204ENST00000467717 CYP19A1P11511 503 aaPredicted RBP22.06■■□□□ 1.12
VARS2-204ENST00000467717 LINC00116Q8NCU8 138 aa22.06■■□□□ 1.12
VARS2-204ENST00000467717 TWISTNBQ3B726 338 aaPredicted RBP22.05■■□□□ 1.12
VARS2-204ENST00000467717 TSPYL6Q8N831 410 aa22.05■■□□□ 1.12
VARS2-204ENST00000467717 CHMP4AQ9BY43 222 aa22.05■■□□□ 1.12
VARS2-204ENST00000467717 YY1P25490 414 aa22.04■■□□□ 1.12
VARS2-204ENST00000467717 R3HDM1Q15032 1099 aaKnown RBP22.04■■□□□ 1.12
VARS2-204ENST00000467717 UBR2Q8IWV8 1755 aa22.04■■□□□ 1.12
VARS2-204ENST00000467717 RGPD3A6NKT7 1758 aaPredicted RBP22.03■■□□□ 1.12
VARS2-204ENST00000467717 RGPD4Q7Z3J3 1758 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms