RNA–Protein interactions for RNA: ENST00000467642.5

ZC3HC1-204, Transcript of zinc finger C3HC-type containing 1, humanhuman

TSL 2

Gene ZC3HC1, Length 1,934 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3HC1-204ENST00000467642 KDM6AO15550 1401 aaPredicted RBP13.16□□□□□ -0.3
ZC3HC1-204ENST00000467642 MYBBP1AQ9BQG0 1328 aaKnown RBP13.16□□□□□ -0.3
ZC3HC1-204ENST00000467642 GAS2L2Q8NHY3 880 aa13.16□□□□□ -0.3
ZC3HC1-204ENST00000467642 LGR6Q9HBX8 967 aa13.16□□□□□ -0.3
ZC3HC1-204ENST00000467642 HMGB2P26583 209 aaKnown RBP13.15□□□□□ -0.3
ZC3HC1-204ENST00000467642 PHACTR3Q96KR7 559 aa13.15□□□□□ -0.3
ZC3HC1-204ENST00000467642 ZNF827Q17R98 1081 aa13.15□□□□□ -0.3
ZC3HC1-204ENST00000467642 PRKRIP1Q9H875 184 aaPredicted RBP13.15□□□□□ -0.3
ZC3HC1-204ENST00000467642 ATG3Q9NT62 314 aa13.15□□□□□ -0.3
ZC3HC1-204ENST00000467642 TFCP2L1Q9NZI6 479 aa13.15□□□□□ -0.3
ZC3HC1-204ENST00000467642 LOC102724428A0A0B4J2F2 783 aa13.14□□□□□ -0.31
ZC3HC1-204ENST00000467642 RNMTO43148 476 aaKnown RBP13.14□□□□□ -0.31
ZC3HC1-204ENST00000467642 NEFMP07197 916 aa13.14□□□□□ -0.31
ZC3HC1-204ENST00000467642 SIK1P57059 783 aa13.14□□□□□ -0.31
ZC3HC1-204ENST00000467642 PDGFDQ9GZP0 370 aaPredicted RBP13.14□□□□□ -0.31
ZC3HC1-204ENST00000467642 GNAT3A8MTJ3 354 aa13.13□□□□□ -0.31
ZC3HC1-204ENST00000467642 AKT1S1Q96B36 256 aa13.13□□□□□ -0.31
ZC3HC1-204ENST00000467642 ATP6V1AP38606 617 aa13.13□□□□□ -0.31
ZC3HC1-204ENST00000467642 RBM42Q9BTD8 480 aaKnown RBP13.13□□□□□ -0.31
ZC3HC1-204ENST00000467642 SLC52A2Q9HAB3 445 aa13.13□□□□□ -0.31
ZC3HC1-204ENST00000467642 PAPPAQ13219 1627 aa13.12□□□□□ -0.31
ZC3HC1-204ENST00000467642 MAP3K5Q99683 1374 aa13.12□□□□□ -0.31
ZC3HC1-204ENST00000467642 SCN11AQ9UI33 1791 aa13.12□□□□□ -0.31
ZC3HC1-204ENST00000467642 ZBTB7AO95365 584 aa13.11□□□□□ -0.31
ZC3HC1-204ENST00000467642 PNNQ9H307 717 aaKnown RBP13.11□□□□□ -0.31
ZC3HC1-204ENST00000467642 SPON1Q9HCB6 807 aa13.11□□□□□ -0.31
ZC3HC1-204ENST00000467642 PTCD1O75127 700 aaKnown RBP13.11□□□□□ -0.31
ZC3HC1-204ENST00000467642 TEFQ10587 303 aa13.1□□□□□ -0.31
ZC3HC1-204ENST00000467642 IL17REQ8NFR9 667 aa13.1□□□□□ -0.31
ZC3HC1-204ENST00000467642 RTF1Q92541 710 aaKnown RBP13.1□□□□□ -0.31
ZC3HC1-204ENST00000467642 AK7Q96M32 723 aa13.09□□□□□ -0.31
ZC3HC1-204ENST00000467642 ATF5Q9Y2D1 282 aaPredicted RBP13.09□□□□□ -0.31
ZC3HC1-204ENST00000467642 C5P01031 1676 aa13.09□□□□□ -0.31
ZC3HC1-204ENST00000467642 ITPK1Q13572 414 aa13.09□□□□□ -0.31
ZC3HC1-204ENST00000467642 LINC00116Q8NCU8 138 aa13.09□□□□□ -0.31
ZC3HC1-204ENST00000467642 VIRMAQ69YN4 1812 aaKnown RBP13.09□□□□□ -0.31
ZC3HC1-204ENST00000467642 PNPLA7Q6ZV29 1317 aa13.08□□□□□ -0.31
ZC3HC1-204ENST00000467642 MAPK8IP3Q9UPT6 1336 aa13.08□□□□□ -0.31
ZC3HC1-204ENST00000467642 SLC39A6Q13433 755 aa13.08□□□□□ -0.32
ZC3HC1-204ENST00000467642 WDR43Q15061 677 aaKnown RBP eCLIP13.08□□□□□ -0.32
ZC3HC1-204ENST00000467642 PLEKHF1Q96S99 279 aa13.08□□□□□ -0.32
ZC3HC1-204ENST00000467642 MTFR1LQ9H019 292 aa13.08□□□□□ -0.32
ZC3HC1-204ENST00000467642 PPP1R1BQ9UD71 204 aaPredicted RBP13.08□□□□□ -0.32
ZC3HC1-204ENST00000467642 TAF1LQ8IZX4 1826 aa13.08□□□□□ -0.32
ZC3HC1-204ENST00000467642 LRP5O75197 1615 aa13.08□□□□□ -0.32
ZC3HC1-204ENST00000467642 ERICH6Q7L0X2 663 aa13.07□□□□□ -0.32
ZC3HC1-204ENST00000467642 SLC4A9Q96Q91 983 aa13.07□□□□□ -0.32
ZC3HC1-204ENST00000467642 CASZ1Q86V15 1759 aa13.07□□□□□ -0.32
ZC3HC1-204ENST00000467642 MCM10Q7L590 875 aa13.07□□□□□ -0.32
ZC3HC1-204ENST00000467642 TTC5Q8N0Z6 440 aa13.07□□□□□ -0.32
ZC3HC1-204ENST00000467642 PHF14O94880 888 aa13.06□□□□□ -0.32
ZC3HC1-204ENST00000467642 C4BP0C0L5 1744 aa13.06□□□□□ -0.32
ZC3HC1-204ENST00000467642 COL23A1Q86Y22 540 aaPredicted RBP13.06□□□□□ -0.32
ZC3HC1-204ENST00000467642 FLAD1Q8NFF5 587 aa13.06□□□□□ -0.32
ZC3HC1-204ENST00000467642 SLC16A10Q8TF71 515 aa13.06□□□□□ -0.32
ZC3HC1-204ENST00000467642 MRC1P22897 1456 aa13.06□□□□□ -0.32
ZC3HC1-204ENST00000467642 ADAMTS7Q9UKP4 1686 aa13.06□□□□□ -0.32
ZC3HC1-204ENST00000467642 GNPATO15228 680 aa13.05□□□□□ -0.32
ZC3HC1-204ENST00000467642 HTATSF1O43719 755 aaKnown RBP13.05□□□□□ -0.32
ZC3HC1-204ENST00000467642 DCTN1Q14203 1278 aa13.05□□□□□ -0.32
ZC3HC1-204ENST00000467642 CEMIPQ8WUJ3 1361 aa13.05□□□□□ -0.32
ZC3HC1-204ENST00000467642 QSER1Q2KHR3 1735 aa13.04□□□□□ -0.32
ZC3HC1-204ENST00000467642 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.04□□□□□ -0.32
ZC3HC1-204ENST00000467642 BTBD11A6QL63 1104 aa13.04□□□□□ -0.32
ZC3HC1-204ENST00000467642 NFE2L2Q16236 605 aa13.04□□□□□ -0.32
ZC3HC1-204ENST00000467642 ZNF790Q6PG37 636 aa13.04□□□□□ -0.32
ZC3HC1-204ENST00000467642 SMIM5Q71RC9 77 aa13.04□□□□□ -0.32
ZC3HC1-204ENST00000467642 ADAMTS8Q9UP79 889 aa13.04□□□□□ -0.32
ZC3HC1-204ENST00000467642 TUBGCP6Q96RT7 1819 aa13.04□□□□□ -0.32
ZC3HC1-204ENST00000467642 PTGER2P43116 358 aa13.03□□□□□ -0.32
ZC3HC1-204ENST00000467642 AMIGO3Q86WK7 504 aa13.03□□□□□ -0.32
ZC3HC1-204ENST00000467642 CCDC146Q8IYE0 955 aa13.03□□□□□ -0.32
ZC3HC1-204ENST00000467642 RTCBQ9Y3I0 505 aaKnown RBP13.03□□□□□ -0.32
ZC3HC1-204ENST00000467642 SSFA2P28290 1259 aa13.03□□□□□ -0.32
ZC3HC1-204ENST00000467642 RC3H1Q5TC82 1133 aaKnown RBP13.03□□□□□ -0.32
ZC3HC1-204ENST00000467642 PPP4R2Q9NY27 417 aa13.03□□□□□ -0.32
ZC3HC1-204ENST00000467642 ZNF831Q5JPB2 1677 aa13.03□□□□□ -0.32
ZC3HC1-204ENST00000467642 POLD1P28340 1107 aa13.02□□□□□ -0.32
ZC3HC1-204ENST00000467642 RIPK4P57078 832 aa13.02□□□□□ -0.32
ZC3HC1-204ENST00000467642 DNAJC10Q8IXB1 793 aa13.02□□□□□ -0.32
ZC3HC1-204ENST00000467642 CRKLP46109 303 aaKnown RBP13.01□□□□□ -0.33
ZC3HC1-204ENST00000467642 NEUROD2Q15784 382 aa13.01□□□□□ -0.33
ZC3HC1-204ENST00000467642 TRAPPC3LQ5T215 181 aa13.01□□□□□ -0.33
ZC3HC1-204ENST00000467642 VSIG10Q8N0Z9 540 aa13.01□□□□□ -0.33
ZC3HC1-204ENST00000467642 RUNDC1Q96C34 613 aa13.01□□□□□ -0.33
ZC3HC1-204ENST00000467642 CNTNAP4Q9C0A0 1308 aa13.01□□□□□ -0.33
ZC3HC1-204ENST00000467642 TAF7Q15545 349 aaPredicted RBP13.01□□□□□ -0.33
ZC3HC1-204ENST00000467642 MSL1Q68DK7 614 aa13.01□□□□□ -0.33
ZC3HC1-204ENST00000467642 ZNF496Q96IT1 587 aaPredicted RBP13.01□□□□□ -0.33
ZC3HC1-204ENST00000467642 UBR3Q6ZT12 1888 aa13.01□□□□□ -0.33
ZC3HC1-204ENST00000467642 DLG5Q8TDM6 1919 aa13□□□□□ -0.33
ZC3HC1-204ENST00000467642 SIPA1L3O60292 1781 aaPredicted RBP13□□□□□ -0.33
ZC3HC1-204ENST00000467642 RPS6KA4O75676 772 aa13□□□□□ -0.33
ZC3HC1-204ENST00000467642 TMPOP42166 694 aaKnown RBP13□□□□□ -0.33
ZC3HC1-204ENST00000467642 CCDC184Q52MB2 194 aa13□□□□□ -0.33
ZC3HC1-204ENST00000467642 FMNL2Q96PY5 1086 aa13□□□□□ -0.33
ZC3HC1-204ENST00000467642 ARXQ96QS3 562 aa13□□□□□ -0.33
ZC3HC1-204ENST00000467642 SGIP1Q9BQI5 828 aa13□□□□□ -0.33
ZC3HC1-204ENST00000467642 COL5A3P25940 1745 aaPredicted RBP13□□□□□ -0.33
ZC3HC1-204ENST00000467642 KCPQ6ZWJ8 1503 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms