RNA–Protein interactions for RNA: ENST00000466861.1

SUMO3-205, Transcript of small ubiquitin-like modifier 3, humanhuman

TSL 2

Gene SUMO3, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-205ENST00000466861 CEMIPQ8WUJ3 1361 aa30.89■■■□□ 2.54
SUMO3-205ENST00000466861 IL17REQ8NFR9 667 aa30.87■■■□□ 2.53
SUMO3-205ENST00000466861 STK32BQ9NY57 414 aa30.87■■■□□ 2.53
SUMO3-205ENST00000466861 RTF1Q92541 710 aaKnown RBP30.86■■■□□ 2.53
SUMO3-205ENST00000466861 TAF1LQ8IZX4 1826 aa30.85■■■□□ 2.53
SUMO3-205ENST00000466861 LOC102724428A0A0B4J2F2 783 aa30.85■■■□□ 2.53
SUMO3-205ENST00000466861 SIK1P57059 783 aa30.85■■■□□ 2.53
SUMO3-205ENST00000466861 R3HDM1Q15032 1099 aaKnown RBP30.85■■■□□ 2.53
SUMO3-205ENST00000466861 NFE2L2Q16236 605 aa30.85■■■□□ 2.53
SUMO3-205ENST00000466861 SLC15A2Q16348 729 aa30.85■■■□□ 2.53
SUMO3-205ENST00000466861 ANO8Q9HCE9 1232 aaPredicted RBP30.85■■■□□ 2.53
SUMO3-205ENST00000466861 DLG5Q8TDM6 1919 aa30.85■■■□□ 2.53
SUMO3-205ENST00000466861 TEFQ10587 303 aa30.83■■■□□ 2.53
SUMO3-205ENST00000466861 ADAMTS8Q9UP79 889 aa30.83■■■□□ 2.53
SUMO3-205ENST00000466861 SIPA1L3O60292 1781 aaPredicted RBP30.83■■■□□ 2.53
SUMO3-205ENST00000466861 C5P01031 1676 aa30.82■■■□□ 2.52
SUMO3-205ENST00000466861 QSER1Q2KHR3 1735 aa30.81■■■□□ 2.52
SUMO3-205ENST00000466861 AKT1S1Q96B36 256 aa30.81■■■□□ 2.52
SUMO3-205ENST00000466861 RUNDC1Q96C34 613 aa30.81■■■□□ 2.52
SUMO3-205ENST00000466861 PSDA5PKW4 1024 aaPredicted RBP30.8■■■□□ 2.52
SUMO3-205ENST00000466861 CICQ96RK0 1608 aaPredicted RBP30.78■■■□□ 2.52
SUMO3-205ENST00000466861 ATP6V1AP38606 617 aa30.76■■■□□ 2.51
SUMO3-205ENST00000466861 MRS2Q9HD23 443 aa30.76■■■□□ 2.51
SUMO3-205ENST00000466861 TMPOP42166 694 aaKnown RBP30.75■■■□□ 2.51
SUMO3-205ENST00000466861 KCNQ4P56696 695 aa30.75■■■□□ 2.51
SUMO3-205ENST00000466861 LMOD3Q0VAK6 560 aa30.75■■■□□ 2.51
SUMO3-205ENST00000466861 CCDC184Q52MB2 194 aa30.75■■■□□ 2.51
SUMO3-205ENST00000466861 UBR2Q8IWV8 1755 aa30.74■■■□□ 2.51
SUMO3-205ENST00000466861 ZNF827Q17R98 1081 aa30.74■■■□□ 2.51
SUMO3-205ENST00000466861 PNISRQ8TF01 805 aaKnown RBP30.74■■■□□ 2.51
SUMO3-205ENST00000466861 RBM42Q9BTD8 480 aaKnown RBP30.74■■■□□ 2.51
SUMO3-205ENST00000466861 C4BP0C0L5 1744 aa30.73■■■□□ 2.51
SUMO3-205ENST00000466861 MCM10Q7L590 875 aa30.73■■■□□ 2.51
SUMO3-205ENST00000466861 CASZ1Q86V15 1759 aa30.73■■■□□ 2.51
SUMO3-205ENST00000466861 RIPK4P57078 832 aa30.71■■■□□ 2.51
SUMO3-205ENST00000466861 ITPK1Q13572 414 aa30.71■■■□□ 2.51
SUMO3-205ENST00000466861 TTC5Q8N0Z6 440 aa30.71■■■□□ 2.51
SUMO3-205ENST00000466861 VSIG10Q8N0Z9 540 aa30.71■■■□□ 2.51
SUMO3-205ENST00000466861 SLC4A9Q96Q91 983 aa30.71■■■□□ 2.51
SUMO3-205ENST00000466861 KCPQ6ZWJ8 1503 aa30.7■■■□□ 2.51
SUMO3-205ENST00000466861 PTCD1O75127 700 aaKnown RBP30.7■■■□□ 2.51
SUMO3-205ENST00000466861 ZNF790Q6PG37 636 aa30.7■■■□□ 2.51
SUMO3-205ENST00000466861 CCDC146Q8IYE0 955 aa30.7■■■□□ 2.51
SUMO3-205ENST00000466861 FLAD1Q8NFF5 587 aa30.7■■■□□ 2.51
SUMO3-205ENST00000466861 TFCP2L1Q9NZI6 479 aa30.7■■■□□ 2.51
SUMO3-205ENST00000466861 COL5A3P25940 1745 aaPredicted RBP30.7■■■□□ 2.5
SUMO3-205ENST00000466861 TUBGCP6Q96RT7 1819 aa30.69■■■□□ 2.5
SUMO3-205ENST00000466861 TAF7Q15545 349 aaPredicted RBP30.69■■■□□ 2.5
SUMO3-205ENST00000466861 RC3H1Q5TC82 1133 aaKnown RBP30.69■■■□□ 2.5
SUMO3-205ENST00000466861 BTBD11A6QL63 1104 aa30.68■■■□□ 2.5
SUMO3-205ENST00000466861 SLC39A6Q13433 755 aa30.68■■■□□ 2.5
SUMO3-205ENST00000466861 DCTN1Q14203 1278 aa30.68■■■□□ 2.5
SUMO3-205ENST00000466861 LINC00116Q8NCU8 138 aa30.68■■■□□ 2.5
SUMO3-205ENST00000466861 AK7Q96M32 723 aa30.67■■■□□ 2.5
SUMO3-205ENST00000466861 CNTNAP4Q9C0A0 1308 aa30.67■■■□□ 2.5
SUMO3-205ENST00000466861 LRP5O75197 1615 aa30.66■■■□□ 2.5
SUMO3-205ENST00000466861 UBR3Q6ZT12 1888 aa30.66■■■□□ 2.5
SUMO3-205ENST00000466861 SLC16A10Q8TF71 515 aa30.66■■■□□ 2.5
SUMO3-205ENST00000466861 TJP1Q07157 1748 aa30.65■■■□□ 2.5
SUMO3-205ENST00000466861 PNPLA7Q6ZV29 1317 aa30.65■■■□□ 2.5
SUMO3-205ENST00000466861 FMNL2Q96PY5 1086 aa30.63■■■□□ 2.49
SUMO3-205ENST00000466861 TEX13AQ9BXU3 409 aaPredicted RBP30.63■■■□□ 2.49
SUMO3-205ENST00000466861 BABAM1Q9NWV8 329 aa30.63■■■□□ 2.49
SUMO3-205ENST00000466861 SSFA2P28290 1259 aa30.62■■■□□ 2.49
SUMO3-205ENST00000466861 HEG1Q9ULI3 1381 aa30.62■■■□□ 2.49
SUMO3-205ENST00000466861 NCBP3Q53F19 620 aaKnown RBP30.61■■■□□ 2.49
SUMO3-205ENST00000466861 ZNF496Q96IT1 587 aaPredicted RBP30.61■■■□□ 2.49
SUMO3-205ENST00000466861 MYH14Q7Z406 1995 aaKnown RBP30.61■■■□□ 2.49
SUMO3-205ENST00000466861 SPON1Q9HCB6 807 aa30.6■■■□□ 2.49
SUMO3-205ENST00000466861 KDM3BQ7LBC6 1761 aa30.59■■■□□ 2.49
SUMO3-205ENST00000466861 APAF1O14727 1248 aa30.59■■■□□ 2.49
SUMO3-205ENST00000466861 MTFR1LQ9H019 292 aa30.59■■■□□ 2.49
SUMO3-205ENST00000466861 TRIM35Q9UPQ4 493 aa30.59■■■□□ 2.49
SUMO3-205ENST00000466861 CCER2I3L3R5 266 aa30.58■■■□□ 2.49
SUMO3-205ENST00000466861 ADRA2BP18089 450 aa30.58■■■□□ 2.49
SUMO3-205ENST00000466861 RRP7AQ9Y3A4 280 aaKnown RBP30.58■■■□□ 2.49
SUMO3-205ENST00000466861 GNPATO15228 680 aa30.57■■■□□ 2.48
SUMO3-205ENST00000466861 NEUROD2Q15784 382 aa30.57■■■□□ 2.48
SUMO3-205ENST00000466861 DNAJC10Q8IXB1 793 aa30.57■■■□□ 2.48
SUMO3-205ENST00000466861 PDGFDQ9GZP0 370 aaPredicted RBP30.57■■■□□ 2.48
SUMO3-205ENST00000466861 RTCBQ9Y3I0 505 aaKnown RBP30.57■■■□□ 2.48
SUMO3-205ENST00000466861 RPS6KA4O75676 772 aa30.56■■■□□ 2.48
SUMO3-205ENST00000466861 STARD3NLO95772 234 aa30.56■■■□□ 2.48
SUMO3-205ENST00000466861 CYP19A1P11511 503 aaPredicted RBP30.56■■■□□ 2.48
SUMO3-205ENST00000466861 CRKLP46109 303 aaKnown RBP30.56■■■□□ 2.48
SUMO3-205ENST00000466861 DIEXFQ68CQ4 756 aaKnown RBP30.56■■■□□ 2.48
SUMO3-205ENST00000466861 COL23A1Q86Y22 540 aaPredicted RBP30.56■■■□□ 2.48
SUMO3-205ENST00000466861 THUMPD2Q9BTF0 503 aaKnown RBP30.56■■■□□ 2.48
SUMO3-205ENST00000466861 COL24A1Q17RW2 1714 aa30.55■■■□□ 2.48
SUMO3-205ENST00000466861 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP30.54■■■□□ 2.48
SUMO3-205ENST00000466861 KCNQ3O43525 872 aa30.54■■■□□ 2.48
SUMO3-205ENST00000466861 CALD1Q05682 793 aaKnown RBP30.53■■■□□ 2.48
SUMO3-205ENST00000466861 CCDC87Q9NVE4 849 aa30.53■■■□□ 2.48
SUMO3-205ENST00000466861 SNRPA1P09661 255 aaKnown RBP30.52■■■□□ 2.48
SUMO3-205ENST00000466861 CCDC27Q2M243 656 aa30.52■■■□□ 2.48
SUMO3-205ENST00000466861 INTS5Q6P9B9 1019 aaKnown RBP30.52■■■□□ 2.48
SUMO3-205ENST00000466861 ZBTB7AO95365 584 aa30.5■■■□□ 2.47
SUMO3-205ENST00000466861 TRAPPC3LQ5T215 181 aa30.5■■■□□ 2.47
SUMO3-205ENST00000466861 NGEFQ8N5V2 710 aa30.5■■■□□ 2.47
SUMO3-205ENST00000466861 AMIGO3Q86WK7 504 aa30.49■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms