RNA–Protein interactions for RNA: ENST00000466541.1

SHROOM3-202, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 628 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-202ENST00000466541 RTF1Q92541 710 aaKnown RBP15.95■□□□□ 0.14
SHROOM3-202ENST00000466541 ADAMTS8Q9UP79 889 aa15.95■□□□□ 0.14
SHROOM3-202ENST00000466541 DLG5Q8TDM6 1919 aa15.94■□□□□ 0.14
SHROOM3-202ENST00000466541 PTCD1O75127 700 aaKnown RBP15.94■□□□□ 0.14
SHROOM3-202ENST00000466541 DCTN1Q14203 1278 aa15.94■□□□□ 0.14
SHROOM3-202ENST00000466541 MCM10Q7L590 875 aa15.94■□□□□ 0.14
SHROOM3-202ENST00000466541 IL17REQ8NFR9 667 aa15.94■□□□□ 0.14
SHROOM3-202ENST00000466541 PLEKHF1Q96S99 279 aa15.94■□□□□ 0.14
SHROOM3-202ENST00000466541 SLC52A2Q9HAB3 445 aa15.94■□□□□ 0.14
SHROOM3-202ENST00000466541 MRS2Q9HD23 443 aa15.94■□□□□ 0.14
SHROOM3-202ENST00000466541 TEFQ10587 303 aa15.93■□□□□ 0.14
SHROOM3-202ENST00000466541 SLC39A6Q13433 755 aa15.93■□□□□ 0.14
SHROOM3-202ENST00000466541 NEUROD2Q15784 382 aa15.93■□□□□ 0.14
SHROOM3-202ENST00000466541 LOC102724428A0A0B4J2F2 783 aa15.92■□□□□ 0.14
SHROOM3-202ENST00000466541 ATP6V1AP38606 617 aa15.92■□□□□ 0.14
SHROOM3-202ENST00000466541 SIK1P57059 783 aa15.92■□□□□ 0.14
SHROOM3-202ENST00000466541 SLC15A2Q16348 729 aa15.92■□□□□ 0.14
SHROOM3-202ENST00000466541 ZNF827Q17R98 1081 aa15.92■□□□□ 0.14
SHROOM3-202ENST00000466541 RRP7AQ9Y3A4 280 aaKnown RBP15.92■□□□□ 0.14
SHROOM3-202ENST00000466541 NFE2L2Q16236 605 aa15.91■□□□□ 0.14
SHROOM3-202ENST00000466541 TFCP2L1Q9NZI6 479 aa15.91■□□□□ 0.14
SHROOM3-202ENST00000466541 C5P01031 1676 aa15.9■□□□□ 0.14
SHROOM3-202ENST00000466541 SENP3-EIF4A1A0A087X0R7 540 aa15.9■□□□□ 0.14
SHROOM3-202ENST00000466541 MSH5O43196 834 aa15.9■□□□□ 0.14
SHROOM3-202ENST00000466541 PDGFDQ9GZP0 370 aaPredicted RBP15.9■□□□□ 0.14
SHROOM3-202ENST00000466541 TAF1LQ8IZX4 1826 aa15.89■□□□□ 0.13
SHROOM3-202ENST00000466541 RIPK4P57078 832 aa15.89■□□□□ 0.13
SHROOM3-202ENST00000466541 RUNDC1Q96C34 613 aa15.89■□□□□ 0.13
SHROOM3-202ENST00000466541 THUMPD2Q9BTF0 503 aaKnown RBP15.89■□□□□ 0.13
SHROOM3-202ENST00000466541 PAPPAQ13219 1627 aa15.88■□□□□ 0.13
SHROOM3-202ENST00000466541 ITPK1Q13572 414 aa15.88■□□□□ 0.13
SHROOM3-202ENST00000466541 TTC5Q8N0Z6 440 aa15.88■□□□□ 0.13
SHROOM3-202ENST00000466541 LINC00116Q8NCU8 138 aa15.88■□□□□ 0.13
SHROOM3-202ENST00000466541 ADAMTS7Q9UKP4 1686 aa15.88■□□□□ 0.13
SHROOM3-202ENST00000466541 BTBD11A6QL63 1104 aa15.87■□□□□ 0.13
SHROOM3-202ENST00000466541 SMIM5Q71RC9 77 aa15.87■□□□□ 0.13
SHROOM3-202ENST00000466541 AKT1S1Q96B36 256 aa15.87■□□□□ 0.13
SHROOM3-202ENST00000466541 AK7Q96M32 723 aa15.87■□□□□ 0.13
SHROOM3-202ENST00000466541 SLC4A9Q96Q91 983 aa15.87■□□□□ 0.13
SHROOM3-202ENST00000466541 TUBGCP6Q96RT7 1819 aa15.87■□□□□ 0.13
SHROOM3-202ENST00000466541 MRC1P22897 1456 aa15.86■□□□□ 0.13
SHROOM3-202ENST00000466541 SIPA1L3O60292 1781 aaPredicted RBP15.86■□□□□ 0.13
SHROOM3-202ENST00000466541 ZBTB7AO95365 584 aa15.86■□□□□ 0.13
SHROOM3-202ENST00000466541 TMPOP42166 694 aaKnown RBP15.86■□□□□ 0.13
SHROOM3-202ENST00000466541 MIS18AQ9NYP9 233 aa15.86■□□□□ 0.13
SHROOM3-202ENST00000466541 C4BP0C0L5 1744 aa15.85■□□□□ 0.13
SHROOM3-202ENST00000466541 KCNQ3O43525 872 aa15.85■□□□□ 0.13
SHROOM3-202ENST00000466541 HTATSF1O43719 755 aaKnown RBP15.85■□□□□ 0.13
SHROOM3-202ENST00000466541 PHF14O94880 888 aa15.85■□□□□ 0.13
SHROOM3-202ENST00000466541 CEMIPQ8WUJ3 1361 aa15.85■□□□□ 0.13
SHROOM3-202ENST00000466541 GNPATO15228 680 aa15.84■□□□□ 0.13
SHROOM3-202ENST00000466541 FAM9BQ8IZU0 186 aa15.84■□□□□ 0.13
SHROOM3-202ENST00000466541 ATF5Q9Y2D1 282 aaPredicted RBP15.84■□□□□ 0.13
SHROOM3-202ENST00000466541 APAF1O14727 1248 aa15.83■□□□□ 0.12
SHROOM3-202ENST00000466541 DIEXFQ68CQ4 756 aaKnown RBP15.83■□□□□ 0.12
SHROOM3-202ENST00000466541 ZNF790Q6PG37 636 aa15.83■□□□□ 0.12
SHROOM3-202ENST00000466541 DNAJC10Q8IXB1 793 aa15.83■□□□□ 0.12
SHROOM3-202ENST00000466541 PNISRQ8TF01 805 aaKnown RBP15.83■□□□□ 0.12
SHROOM3-202ENST00000466541 SRCAPQ6ZRS2 3230 aa15.83■□□□□ 0.12
SHROOM3-202ENST00000466541 HMGB2P26583 209 aaKnown RBP15.82■□□□□ 0.12
SHROOM3-202ENST00000466541 TAF7Q15545 349 aaPredicted RBP15.82■□□□□ 0.12
SHROOM3-202ENST00000466541 LAS1LQ9Y4W2 734 aaKnown RBP15.82■□□□□ 0.12
SHROOM3-202ENST00000466541 PNPLA7Q6ZV29 1317 aa15.82■□□□□ 0.12
SHROOM3-202ENST00000466541 TJP1Q07157 1748 aa15.81■□□□□ 0.12
SHROOM3-202ENST00000466541 LMOD3Q0VAK6 560 aa15.81■□□□□ 0.12
SHROOM3-202ENST00000466541 KCPQ6ZWJ8 1503 aa15.81■□□□□ 0.12
SHROOM3-202ENST00000466541 CASZ1Q86V15 1759 aa15.81■□□□□ 0.12
SHROOM3-202ENST00000466541 AMIGO3Q86WK7 504 aa15.81■□□□□ 0.12
SHROOM3-202ENST00000466541 COL23A1Q86Y22 540 aaPredicted RBP15.81■□□□□ 0.12
SHROOM3-202ENST00000466541 ZNF496Q96IT1 587 aaPredicted RBP15.81■□□□□ 0.12
SHROOM3-202ENST00000466541 CRKLP46109 303 aaKnown RBP15.8■□□□□ 0.12
SHROOM3-202ENST00000466541 FMNL2Q96PY5 1086 aa15.8■□□□□ 0.12
SHROOM3-202ENST00000466541 UBR3Q6ZT12 1888 aa15.8■□□□□ 0.12
SHROOM3-202ENST00000466541 UBR2Q8IWV8 1755 aa15.8■□□□□ 0.12
SHROOM3-202ENST00000466541 COL5A3P25940 1745 aaPredicted RBP15.8■□□□□ 0.12
SHROOM3-202ENST00000466541 MYH14Q7Z406 1995 aaKnown RBP15.79■□□□□ 0.12
SHROOM3-202ENST00000466541 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.79■□□□□ 0.12
SHROOM3-202ENST00000466541 MSL1Q68DK7 614 aa15.79■□□□□ 0.12
SHROOM3-202ENST00000466541 SPON1Q9HCB6 807 aa15.79■□□□□ 0.12
SHROOM3-202ENST00000466541 TRIM35Q9UPQ4 493 aa15.79■□□□□ 0.12
SHROOM3-202ENST00000466541 SALL2Q9Y467 1007 aaPredicted RBP15.79■□□□□ 0.12
SHROOM3-202ENST00000466541 QSER1Q2KHR3 1735 aa15.79■□□□□ 0.12
SHROOM3-202ENST00000466541 PPP1R1BQ9UD71 204 aaPredicted RBP15.78■□□□□ 0.12
SHROOM3-202ENST00000466541 RTCBQ9Y3I0 505 aaKnown RBP15.78■□□□□ 0.12
SHROOM3-202ENST00000466541 ZNF831Q5JPB2 1677 aa15.78■□□□□ 0.12
SHROOM3-202ENST00000466541 PRAMEF22A3QJZ6 481 aa15.77■□□□□ 0.12
SHROOM3-202ENST00000466541 TSPYL4Q9UJ04 414 aa15.77■□□□□ 0.12
SHROOM3-202ENST00000466541 HEG1Q9ULI3 1381 aa15.76■□□□□ 0.11
SHROOM3-202ENST00000466541 CNTNAP4Q9C0A0 1308 aa15.76■□□□□ 0.11
SHROOM3-202ENST00000466541 STARD3NLO95772 234 aa15.76■□□□□ 0.11
SHROOM3-202ENST00000466541 CYP19A1P11511 503 aaPredicted RBP15.76■□□□□ 0.11
SHROOM3-202ENST00000466541 CANXP27824 592 aaKnown RBP15.76■□□□□ 0.11
SHROOM3-202ENST00000466541 TRAPPC3LQ5T215 181 aa15.76■□□□□ 0.11
SHROOM3-202ENST00000466541 RC3H1Q5TC82 1133 aaKnown RBP15.76■□□□□ 0.11
SHROOM3-202ENST00000466541 VSIG10Q8N0Z9 540 aa15.76■□□□□ 0.11
SHROOM3-202ENST00000466541 FLAD1Q8NFF5 587 aa15.76■□□□□ 0.11
SHROOM3-202ENST00000466541 MTFR1LQ9H019 292 aa15.76■□□□□ 0.11
SHROOM3-202ENST00000466541 CCDC87Q9NVE4 849 aa15.76■□□□□ 0.11
SHROOM3-202ENST00000466541 ZNF330Q9Y3S2 320 aaPredicted RBP15.76■□□□□ 0.11
SHROOM3-202ENST00000466541 INTS5Q6P9B9 1019 aaKnown RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms