RNA–Protein interactions for RNA: ENST00000466425.1

PSMB4-202, Transcript of proteasome subunit beta 4, humanhuman

TSL 2

Gene PSMB4, Length 665 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-202ENST00000466425 THSD4Q6ZMP0 1018 aa8.44□□□□□ -1.06
PSMB4-202ENST00000466425 CHD2O14647 1828 aaKnown RBP8.44□□□□□ -1.06
PSMB4-202ENST00000466425 ROBO2Q9HCK4 1378 aa8.44□□□□□ -1.06
PSMB4-202ENST00000466425 PTCH1Q13635 1447 aa8.44□□□□□ -1.06
PSMB4-202ENST00000466425 PPM1GO15355 546 aaPredicted RBP8.43□□□□□ -1.06
PSMB4-202ENST00000466425 BCAR3O75815 825 aa8.43□□□□□ -1.06
PSMB4-202ENST00000466425 RIPK4P57078 832 aa8.43□□□□□ -1.06
PSMB4-202ENST00000466425 PMFBP1Q8TBY8 1022 aa8.43□□□□□ -1.06
PSMB4-202ENST00000466425 AMOTL2Q9Y2J4 779 aa8.43□□□□□ -1.06
PSMB4-202ENST00000466425 TTC21AQ8NDW8 1320 aa8.43□□□□□ -1.06
PSMB4-202ENST00000466425 DIP2AQ14689 1571 aa8.43□□□□□ -1.06
PSMB4-202ENST00000466425 NRXN3Q9Y4C0 1643 aa8.43□□□□□ -1.06
PSMB4-202ENST00000466425 KNDC1Q76NI1 1749 aa8.43□□□□□ -1.06
PSMB4-202ENST00000466425 IPO8O15397 1037 aaKnown RBP8.42□□□□□ -1.06
PSMB4-202ENST00000466425 NFE2L2Q16236 605 aa8.42□□□□□ -1.06
PSMB4-202ENST00000466425 CLUAP1Q96AJ1 413 aa8.42□□□□□ -1.06
PSMB4-202ENST00000466425 CHMP4BQ9H444 224 aaKnown RBP8.42□□□□□ -1.06
PSMB4-202ENST00000466425 TTC21BQ7Z4L5 1316 aa8.42□□□□□ -1.06
PSMB4-202ENST00000466425 KDM2BQ8NHM5 1336 aa8.42□□□□□ -1.06
PSMB4-202ENST00000466425 CDK12Q9NYV4 1490 aaPredicted RBP8.42□□□□□ -1.06
PSMB4-202ENST00000466425 SHPRHQ149N8 1683 aa8.42□□□□□ -1.06
PSMB4-202ENST00000466425 SETD1AO15047 1707 aaKnown RBP8.42□□□□□ -1.06
PSMB4-202ENST00000466425 STRCP1A6NGW2 1772 aa8.42□□□□□ -1.06
PSMB4-202ENST00000466425 XIRP1Q702N8 1843 aaKnown RBP8.41□□□□□ -1.06
PSMB4-202ENST00000466425 ADGRB2O60241 1585 aa8.41□□□□□ -1.06
PSMB4-202ENST00000466425 KIF16BQ96L93 1317 aa8.41□□□□□ -1.06
PSMB4-202ENST00000466425 EVI5O60447 810 aa8.41□□□□□ -1.06
PSMB4-202ENST00000466425 PRKAR2BP31323 418 aa8.41□□□□□ -1.06
PSMB4-202ENST00000466425 IL13P35225 146 aa8.41□□□□□ -1.06
PSMB4-202ENST00000466425 PPP4R3BQ5MIZ7 849 aa8.41□□□□□ -1.06
PSMB4-202ENST00000466425 ZKSCAN2Q63HK3 967 aa8.41□□□□□ -1.06
PSMB4-202ENST00000466425 NME9Q86XW9 330 aa8.41□□□□□ -1.06
PSMB4-202ENST00000466425 FRAT1Q92837 279 aaPredicted RBP8.41□□□□□ -1.06
PSMB4-202ENST00000466425 SLC26A8Q96RN1 970 aa8.41□□□□□ -1.06
PSMB4-202ENST00000466425 ANP32EQ9BTT0 268 aa8.41□□□□□ -1.06
PSMB4-202ENST00000466425 RSPH6AQ9H0K4 717 aa8.41□□□□□ -1.06
PSMB4-202ENST00000466425 EMILIN3Q9NT22 766 aa8.41□□□□□ -1.06
PSMB4-202ENST00000466425 ACEP12821 1306 aa8.4□□□□□ -1.06
PSMB4-202ENST00000466425 GNAI1P63096 354 aa8.4□□□□□ -1.06
PSMB4-202ENST00000466425 ALDH1L2Q3SY69 923 aa8.4□□□□□ -1.06
PSMB4-202ENST00000466425 ANKLE2Q86XL3 938 aa8.4□□□□□ -1.06
PSMB4-202ENST00000466425 FTSJ3Q8IY81 847 aaKnown RBP8.4□□□□□ -1.06
PSMB4-202ENST00000466425 ANKARQ7Z5J8 1434 aa8.39□□□□□ -1.07
PSMB4-202ENST00000466425 PRR36Q9H6K5 1346 aa8.39□□□□□ -1.07
PSMB4-202ENST00000466425 DPYSL4O14531 572 aa8.39□□□□□ -1.07
PSMB4-202ENST00000466425 DZIP1LQ8IYY4 767 aaKnown RBP8.39□□□□□ -1.07
PSMB4-202ENST00000466425 ZNF454Q8N9F8 522 aa8.39□□□□□ -1.07
PSMB4-202ENST00000466425 NGDNQ8NEJ9 315 aaKnown RBP8.39□□□□□ -1.07
PSMB4-202ENST00000466425 BACH2Q9BYV9 841 aa8.39□□□□□ -1.07
PSMB4-202ENST00000466425 RWDD1Q9H446 243 aaPredicted RBP8.39□□□□□ -1.07
PSMB4-202ENST00000466425 SMC4Q9NTJ3 1288 aa8.39□□□□□ -1.07
PSMB4-202ENST00000466425 IFT57Q9NWB7 429 aa8.39□□□□□ -1.07
PSMB4-202ENST00000466425 EMILIN1Q9Y6C2 1016 aa8.39□□□□□ -1.07
PSMB4-202ENST00000466425 ANKRD26Q9UPS8 1709 aa8.39□□□□□ -1.07
PSMB4-202ENST00000466425 USP6P35125 1406 aa8.38□□□□□ -1.07
PSMB4-202ENST00000466425 BRPF1P55201 1214 aaPredicted RBP8.38□□□□□ -1.07
PSMB4-202ENST00000466425 EXOSC9Q06265 439 aaKnown RBP8.38□□□□□ -1.07
PSMB4-202ENST00000466425 IPO9Q96P70 1041 aaKnown RBP8.38□□□□□ -1.07
PSMB4-202ENST00000466425 DDX19BQ9UMR2 479 aa8.38□□□□□ -1.07
PSMB4-202ENST00000466425 COG6Q9Y2V7 657 aa8.38□□□□□ -1.07
PSMB4-202ENST00000466425 LTBP4Q8N2S1 1624 aa8.38□□□□□ -1.07
PSMB4-202ENST00000466425 NPHP4O75161 1426 aaPredicted RBP8.37□□□□□ -1.07
PSMB4-202ENST00000466425 PTPRUQ92729 1446 aa8.37□□□□□ -1.07
PSMB4-202ENST00000466425 USP31Q70CQ4 1352 aa8.37□□□□□ -1.07
PSMB4-202ENST00000466425 MVPQ14764 893 aaKnown RBP8.37□□□□□ -1.07
PSMB4-202ENST00000466425 E2F4Q16254 413 aa8.37□□□□□ -1.07
PSMB4-202ENST00000466425 FAM161AQ3B820 660 aa8.37□□□□□ -1.07
PSMB4-202ENST00000466425 PANK1Q8TE04 598 aa8.37□□□□□ -1.07
PSMB4-202ENST00000466425 DDRGK1Q96HY6 314 aa8.37□□□□□ -1.07
PSMB4-202ENST00000466425 KIF24Q5T7B8 1368 aa8.36□□□□□ -1.07
PSMB4-202ENST00000466425 NWD1Q149M9 1564 aa8.36□□□□□ -1.07
PSMB4-202ENST00000466425 HMOX1P09601 288 aa8.36□□□□□ -1.07
PSMB4-202ENST00000466425 RRS1Q15050 365 aaKnown RBP8.36□□□□□ -1.07
PSMB4-202ENST00000466425 ATF7IPQ6VMQ6 1270 aa8.36□□□□□ -1.07
PSMB4-202ENST00000466425 ARHGAP45Q92619 1136 aa8.36□□□□□ -1.07
PSMB4-202ENST00000466425 TSR2Q969E8 191 aaKnown RBP8.36□□□□□ -1.07
PSMB4-202ENST00000466425 NOP58Q9Y2X3 529 aaKnown RBP8.36□□□□□ -1.07
PSMB4-202ENST00000466425 OVOS2A0A0J9YW53 1432 aa8.36□□□□□ -1.07
PSMB4-202ENST00000466425 OVOS2Q6IE36 1432 aa8.36□□□□□ -1.07
PSMB4-202ENST00000466425 KIF20BQ96Q89 1820 aa8.36□□□□□ -1.07
PSMB4-202ENST00000466425 GOLGA8CPA6NN73 597 aa8.35□□□□□ -1.07
PSMB4-202ENST00000466425 SSH1Q8WYL5 1049 aa8.35□□□□□ -1.07
PSMB4-202ENST00000466425 WNT2BQ93097 391 aa8.35□□□□□ -1.07
PSMB4-202ENST00000466425 VPS9D1Q9Y2B5 631 aa8.35□□□□□ -1.07
PSMB4-202ENST00000466425 SSH2Q76I76 1423 aa8.35□□□□□ -1.07
PSMB4-202ENST00000466425 NRG2O14511 850 aaPredicted RBP8.34□□□□□ -1.07
PSMB4-202ENST00000466425 ITGBL1O95965 494 aaPredicted RBP8.34□□□□□ -1.07
PSMB4-202ENST00000466425 ZNF853P0CG23 659 aa8.34□□□□□ -1.07
PSMB4-202ENST00000466425 CAMK2BQ13554 666 aa8.34□□□□□ -1.07
PSMB4-202ENST00000466425 EIF4A2Q14240 407 aaKnown RBP8.34□□□□□ -1.07
PSMB4-202ENST00000466425 KCNK17Q96T54 332 aa8.34□□□□□ -1.07
PSMB4-202ENST00000466425 BCL2L13Q9BXK5 485 aa8.34□□□□□ -1.07
PSMB4-202ENST00000466425 SBNO1A3KN83 1393 aa8.34□□□□□ -1.07
PSMB4-202ENST00000466425 ARHGEF10O15013 1369 aa8.34□□□□□ -1.07
PSMB4-202ENST00000466425 FLT4P35916 1363 aa8.34□□□□□ -1.07
PSMB4-202ENST00000466425 LRRC7Q96NW7 1537 aa8.34□□□□□ -1.08
PSMB4-202ENST00000466425 TRIM27P14373 513 aa8.33□□□□□ -1.08
PSMB4-202ENST00000466425 KCNA6P17658 529 aa8.33□□□□□ -1.08
PSMB4-202ENST00000466425 FBLN1P23142 703 aa8.33□□□□□ -1.08
PSMB4-202ENST00000466425 AMPHP49418 695 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms