RNA–Protein interactions for RNA: ENST00000465108.5

UBA3-207, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 804 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-207ENST00000465108 IL17REQ8NFR9 667 aa18.34■□□□□ 0.53
UBA3-207ENST00000465108 SMARCC1Q92922 1105 aaPredicted RBP18.34■□□□□ 0.53
UBA3-207ENST00000465108 VIRMAQ69YN4 1812 aaKnown RBP18.34■□□□□ 0.53
UBA3-207ENST00000465108 DCTN1Q14203 1278 aa18.33■□□□□ 0.52
UBA3-207ENST00000465108 MCM10Q7L590 875 aa18.33■□□□□ 0.52
UBA3-207ENST00000465108 FAM9BQ8IZU0 186 aa18.33■□□□□ 0.52
UBA3-207ENST00000465108 PROM2Q8N271 834 aa18.33■□□□□ 0.52
UBA3-207ENST00000465108 PNISRQ8TF01 805 aaKnown RBP18.33■□□□□ 0.52
UBA3-207ENST00000465108 SLC52A2Q9HAB3 445 aa18.33■□□□□ 0.52
UBA3-207ENST00000465108 ASAP1Q9ULH1 1129 aa18.33■□□□□ 0.52
UBA3-207ENST00000465108 RRP7AQ9Y3A4 280 aaKnown RBP18.33■□□□□ 0.52
UBA3-207ENST00000465108 PALLDQ8WX93 1383 aa18.32■□□□□ 0.52
UBA3-207ENST00000465108 KCNQ4P56696 695 aa18.32■□□□□ 0.52
UBA3-207ENST00000465108 RIPK4P57078 832 aa18.32■□□□□ 0.52
UBA3-207ENST00000465108 DCAF8L1A6NGE4 600 aa18.31■□□□□ 0.52
UBA3-207ENST00000465108 NBPF14Q5TI25 921 aa18.31■□□□□ 0.52
UBA3-207ENST00000465108 RBM42Q9BTD8 480 aaKnown RBP18.31■□□□□ 0.52
UBA3-207ENST00000465108 ATG3Q9NT62 314 aa18.31■□□□□ 0.52
UBA3-207ENST00000465108 CCNL1Q9UK58 526 aaPredicted RBP18.31■□□□□ 0.52
UBA3-207ENST00000465108 DLG5Q8TDM6 1919 aa18.3■□□□□ 0.52
UBA3-207ENST00000465108 HTATSF1O43719 755 aaKnown RBP18.3■□□□□ 0.52
UBA3-207ENST00000465108 TMPOP42166 694 aaKnown RBP18.3■□□□□ 0.52
UBA3-207ENST00000465108 SENP3-EIF4A1A0A087X0R7 540 aa18.29■□□□□ 0.52
UBA3-207ENST00000465108 SLC27A3Q5K4L6 730 aa18.29■□□□□ 0.52
UBA3-207ENST00000465108 RGPD3A6NKT7 1758 aaPredicted RBP18.29■□□□□ 0.52
UBA3-207ENST00000465108 RGPD4Q7Z3J3 1758 aa18.29■□□□□ 0.52
UBA3-207ENST00000465108 APAF1O14727 1248 aa18.28■□□□□ 0.52
UBA3-207ENST00000465108 PTCD1O75127 700 aaKnown RBP18.28■□□□□ 0.52
UBA3-207ENST00000465108 SLC39A6Q13433 755 aa18.28■□□□□ 0.52
UBA3-207ENST00000465108 MIER1Q8N108 512 aa18.28■□□□□ 0.52
UBA3-207ENST00000465108 LRRC4BQ9NT99 713 aa18.28■□□□□ 0.52
UBA3-207ENST00000465108 THUMPD2Q9BTF0 503 aaKnown RBP18.27■□□□□ 0.52
UBA3-207ENST00000465108 RREB1Q92766 1687 aa18.27■□□□□ 0.52
UBA3-207ENST00000465108 LOC102724428A0A0B4J2F2 783 aa18.26■□□□□ 0.51
UBA3-207ENST00000465108 PSDA5PKW4 1024 aaPredicted RBP18.26■□□□□ 0.51
UBA3-207ENST00000465108 ATP6V1AP38606 617 aa18.26■□□□□ 0.51
UBA3-207ENST00000465108 SIK1P57059 783 aa18.26■□□□□ 0.51
UBA3-207ENST00000465108 LMOD3Q0VAK6 560 aa18.26■□□□□ 0.51
UBA3-207ENST00000465108 TTC5Q8N0Z6 440 aa18.26■□□□□ 0.51
UBA3-207ENST00000465108 STK32BQ9NY57 414 aa18.26■□□□□ 0.51
UBA3-207ENST00000465108 LY75O60449 1722 aa18.26■□□□□ 0.51
UBA3-207ENST00000465108 NUP188Q5SRE5 1749 aa18.26■□□□□ 0.51
UBA3-207ENST00000465108 BTBD11A6QL63 1104 aa18.25■□□□□ 0.51
UBA3-207ENST00000465108 CCER2I3L3R5 266 aa18.25■□□□□ 0.51
UBA3-207ENST00000465108 R3HDM1Q15032 1099 aaKnown RBP18.25■□□□□ 0.51
UBA3-207ENST00000465108 CEMIPQ8WUJ3 1361 aa18.25■□□□□ 0.51
UBA3-207ENST00000465108 ADAMTS7Q9UKP4 1686 aa18.25■□□□□ 0.51
UBA3-207ENST00000465108 MRC1P22897 1456 aa18.24■□□□□ 0.51
UBA3-207ENST00000465108 TAF7Q15545 349 aaPredicted RBP18.23■□□□□ 0.51
UBA3-207ENST00000465108 ANO8Q9HCE9 1232 aaPredicted RBP18.23■□□□□ 0.51
UBA3-207ENST00000465108 MIS18AQ9NYP9 233 aa18.22■□□□□ 0.51
UBA3-207ENST00000465108 SALL2Q9Y467 1007 aaPredicted RBP18.22■□□□□ 0.51
UBA3-207ENST00000465108 SLC15A2Q16348 729 aa18.21■□□□□ 0.51
UBA3-207ENST00000465108 ZNF790Q6PG37 636 aa18.21■□□□□ 0.51
UBA3-207ENST00000465108 LAS1LQ9Y4W2 734 aaKnown RBP18.21■□□□□ 0.51
UBA3-207ENST00000465108 KCNQ3O43525 872 aa18.2■□□□□ 0.5
UBA3-207ENST00000465108 HMGB2P26583 209 aaKnown RBP18.2■□□□□ 0.5
UBA3-207ENST00000465108 ITPK1Q13572 414 aa18.2■□□□□ 0.5
UBA3-207ENST00000465108 TRIM35Q9UPQ4 493 aa18.2■□□□□ 0.5
UBA3-207ENST00000465108 SIPA1L3O60292 1781 aaPredicted RBP18.19■□□□□ 0.5
UBA3-207ENST00000465108 ZNF827Q17R98 1081 aa18.19■□□□□ 0.5
UBA3-207ENST00000465108 AK7Q96M32 723 aa18.19■□□□□ 0.5
UBA3-207ENST00000465108 SLC4A9Q96Q91 983 aa18.19■□□□□ 0.5
UBA3-207ENST00000465108 TFCP2L1Q9NZI6 479 aa18.19■□□□□ 0.5
UBA3-207ENST00000465108 LINC00116Q8NCU8 138 aa18.18■□□□□ 0.5
UBA3-207ENST00000465108 FMNL2Q96PY5 1086 aa18.18■□□□□ 0.5
UBA3-207ENST00000465108 TAF1LQ8IZX4 1826 aa18.17■□□□□ 0.5
UBA3-207ENST00000465108 DNAJC10Q8IXB1 793 aa18.17■□□□□ 0.5
UBA3-207ENST00000465108 AKT1S1Q96B36 256 aa18.17■□□□□ 0.5
UBA3-207ENST00000465108 ZNF496Q96IT1 587 aaPredicted RBP18.17■□□□□ 0.5
UBA3-207ENST00000465108 C5P01031 1676 aa18.17■□□□□ 0.5
UBA3-207ENST00000465108 TSPYL4Q9UJ04 414 aa18.16■□□□□ 0.5
UBA3-207ENST00000465108 PAPPAQ13219 1627 aa18.16■□□□□ 0.5
UBA3-207ENST00000465108 KCPQ6ZWJ8 1503 aa18.14■□□□□ 0.49
UBA3-207ENST00000465108 GNPATO15228 680 aa18.14■□□□□ 0.49
UBA3-207ENST00000465108 PHF14O94880 888 aa18.14■□□□□ 0.49
UBA3-207ENST00000465108 C4BP0C0L5 1744 aa18.13■□□□□ 0.49
UBA3-207ENST00000465108 CALD1Q05682 793 aaKnown RBP18.13■□□□□ 0.49
UBA3-207ENST00000465108 SMIM5Q71RC9 77 aa18.13■□□□□ 0.49
UBA3-207ENST00000465108 VSIG10Q8N0Z9 540 aa18.13■□□□□ 0.49
UBA3-207ENST00000465108 HEG1Q9ULI3 1381 aa18.13■□□□□ 0.49
UBA3-207ENST00000465108 STARD3NLO95772 234 aa18.12■□□□□ 0.49
UBA3-207ENST00000465108 CRKLP46109 303 aaKnown RBP18.12■□□□□ 0.49
UBA3-207ENST00000465108 PDGFDQ9GZP0 370 aaPredicted RBP18.12■□□□□ 0.49
UBA3-207ENST00000465108 UBR2Q8IWV8 1755 aa18.12■□□□□ 0.49
UBA3-207ENST00000465108 SNRPA1P09661 255 aaKnown RBP18.11■□□□□ 0.49
UBA3-207ENST00000465108 WWC1Q8IX03 1113 aa18.11■□□□□ 0.49
UBA3-207ENST00000465108 TEX13AQ9BXU3 409 aaPredicted RBP18.11■□□□□ 0.49
UBA3-207ENST00000465108 TJP1Q07157 1748 aa18.1■□□□□ 0.49
UBA3-207ENST00000465108 ZNF831Q5JPB2 1677 aa18.1■□□□□ 0.49
UBA3-207ENST00000465108 PNPLA7Q6ZV29 1317 aa18.1■□□□□ 0.49
UBA3-207ENST00000465108 CYP19A1P11511 503 aaPredicted RBP18.1■□□□□ 0.49
UBA3-207ENST00000465108 EIF4A1P60842 406 aaKnown RBP18.1■□□□□ 0.49
UBA3-207ENST00000465108 CCDC27Q2M243 656 aa18.1■□□□□ 0.49
UBA3-207ENST00000465108 RC3H1Q5TC82 1133 aaKnown RBP18.1■□□□□ 0.49
UBA3-207ENST00000465108 RTCBQ9Y3I0 505 aaKnown RBP18.1■□□□□ 0.49
UBA3-207ENST00000465108 CNTNAP4Q9C0A0 1308 aa18.09■□□□□ 0.49
UBA3-207ENST00000465108 PRAMEF22A3QJZ6 481 aa18.09■□□□□ 0.49
UBA3-207ENST00000465108 CHL1O00533 1208 aa18.09■□□□□ 0.49
UBA3-207ENST00000465108 CANXP27824 592 aaKnown RBP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms