RNA–Protein interactions for RNA: ENST00000465003.5

APTX-213, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,991 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-213ENST00000465003 CCDC125Q86Z20 511 aa15.7■□□□□ 0.1
APTX-213ENST00000465003 PROM2Q8N271 834 aa15.7■□□□□ 0.1
APTX-213ENST00000465003 CAMKK2Q96RR4 588 aa15.7■□□□□ 0.1
APTX-213ENST00000465003 ADAMTS7Q9UKP4 1686 aa15.7■□□□□ 0.1
APTX-213ENST00000465003 RTF1Q92541 710 aaKnown RBP15.69■□□□□ 0.1
APTX-213ENST00000465003 SLC52A2Q9HAB3 445 aa15.69■□□□□ 0.1
APTX-213ENST00000465003 PALLDQ8WX93 1383 aa15.68■□□□□ 0.1
APTX-213ENST00000465003 ERVV-2B6SEH9 535 aa15.68■□□□□ 0.1
APTX-213ENST00000465003 PNNQ9H307 717 aaKnown RBP15.68■□□□□ 0.1
APTX-213ENST00000465003 MIS18AQ9NYP9 233 aa15.68■□□□□ 0.1
APTX-213ENST00000465003 TXNRD1Q16881 649 aa15.67■□□□□ 0.1
APTX-213ENST00000465003 ATG3Q9NT62 314 aa15.67■□□□□ 0.1
APTX-213ENST00000465003 LRRC4BQ9NT99 713 aa15.67■□□□□ 0.1
APTX-213ENST00000465003 MRC1P22897 1456 aa15.67■□□□□ 0.1
APTX-213ENST00000465003 PTCD1O75127 700 aaKnown RBP15.67■□□□□ 0.1
APTX-213ENST00000465003 TEFQ10587 303 aa15.67■□□□□ 0.1
APTX-213ENST00000465003 CEMIPQ8WUJ3 1361 aa15.67■□□□□ 0.1
APTX-213ENST00000465003 RREB1Q92766 1687 aa15.66■□□□□ 0.1
APTX-213ENST00000465003 NUP188Q5SRE5 1749 aa15.66■□□□□ 0.1
APTX-213ENST00000465003 SIPA1L3O60292 1781 aaPredicted RBP15.66■□□□□ 0.1
APTX-213ENST00000465003 LY75O60449 1722 aa15.66■□□□□ 0.1
APTX-213ENST00000465003 CCER2I3L3R5 266 aa15.66■□□□□ 0.1
APTX-213ENST00000465003 KCNQ3O43525 872 aa15.66■□□□□ 0.1
APTX-213ENST00000465003 RBM42Q9BTD8 480 aaKnown RBP15.66■□□□□ 0.1
APTX-213ENST00000465003 TRIM35Q9UPQ4 493 aa15.66■□□□□ 0.1
APTX-213ENST00000465003 PLSCR1O15162 318 aa15.65■□□□□ 0.1
APTX-213ENST00000465003 ANO8Q9HCE9 1232 aaPredicted RBP15.64■□□□□ 0.09
APTX-213ENST00000465003 CCNL1Q9UK58 526 aaPredicted RBP15.64■□□□□ 0.09
APTX-213ENST00000465003 SLC4A9Q96Q91 983 aa15.64■□□□□ 0.09
APTX-213ENST00000465003 RGPD3A6NKT7 1758 aaPredicted RBP15.63■□□□□ 0.09
APTX-213ENST00000465003 RGPD4Q7Z3J3 1758 aa15.63■□□□□ 0.09
APTX-213ENST00000465003 PAPPAQ13219 1627 aa15.63■□□□□ 0.09
APTX-213ENST00000465003 PSDA5PKW4 1024 aaPredicted RBP15.62■□□□□ 0.09
APTX-213ENST00000465003 SMIM5Q71RC9 77 aa15.62■□□□□ 0.09
APTX-213ENST00000465003 LAS1LQ9Y4W2 734 aaKnown RBP15.62■□□□□ 0.09
APTX-213ENST00000465003 LOC102724428A0A0B4J2F2 783 aa15.62■□□□□ 0.09
APTX-213ENST00000465003 BTBD11A6QL63 1104 aa15.62■□□□□ 0.09
APTX-213ENST00000465003 SIK1P57059 783 aa15.62■□□□□ 0.09
APTX-213ENST00000465003 ITPK1Q13572 414 aa15.61■□□□□ 0.09
APTX-213ENST00000465003 KCPQ6ZWJ8 1503 aa15.6■□□□□ 0.09
APTX-213ENST00000465003 ATP6V1AP38606 617 aa15.6■□□□□ 0.09
APTX-213ENST00000465003 ZNF827Q17R98 1081 aa15.6■□□□□ 0.09
APTX-213ENST00000465003 C5P01031 1676 aa15.6■□□□□ 0.09
APTX-213ENST00000465003 PRAMEF22A3QJZ6 481 aa15.6■□□□□ 0.09
APTX-213ENST00000465003 HTATSF1O43719 755 aaKnown RBP15.6■□□□□ 0.09
APTX-213ENST00000465003 TAF1LQ8IZX4 1826 aa15.59■□□□□ 0.09
APTX-213ENST00000465003 R3HDM1Q15032 1099 aaKnown RBP15.59■□□□□ 0.09
APTX-213ENST00000465003 ZNF790Q6PG37 636 aa15.59■□□□□ 0.09
APTX-213ENST00000465003 SMARCC1Q92922 1105 aaPredicted RBP15.59■□□□□ 0.09
APTX-213ENST00000465003 ZNF496Q96IT1 587 aaPredicted RBP15.59■□□□□ 0.09
APTX-213ENST00000465003 UBR2Q8IWV8 1755 aa15.59■□□□□ 0.09
APTX-213ENST00000465003 TTC5Q8N0Z6 440 aa15.58■□□□□ 0.09
APTX-213ENST00000465003 LINC00116Q8NCU8 138 aa15.58■□□□□ 0.09
APTX-213ENST00000465003 PDGFDQ9GZP0 370 aaPredicted RBP15.58■□□□□ 0.09
APTX-213ENST00000465003 TAF7Q15545 349 aaPredicted RBP15.58■□□□□ 0.08
APTX-213ENST00000465003 AMIGO3Q86WK7 504 aa15.58■□□□□ 0.08
APTX-213ENST00000465003 TJP1Q07157 1748 aa15.57■□□□□ 0.08
APTX-213ENST00000465003 LMOD3Q0VAK6 560 aa15.57■□□□□ 0.08
APTX-213ENST00000465003 KDM3BQ7LBC6 1761 aa15.57■□□□□ 0.08
APTX-213ENST00000465003 KRT24Q2M2I5 525 aa15.56■□□□□ 0.08
APTX-213ENST00000465003 DNAJC10Q8IXB1 793 aa15.56■□□□□ 0.08
APTX-213ENST00000465003 TUBGCP6Q96RT7 1819 aa15.56■□□□□ 0.08
APTX-213ENST00000465003 SLC27A3Q5K4L6 730 aa15.56■□□□□ 0.08
APTX-213ENST00000465003 WWC1Q8IX03 1113 aa15.56■□□□□ 0.08
APTX-213ENST00000465003 TSPYL4Q9UJ04 414 aa15.56■□□□□ 0.08
APTX-213ENST00000465003 C4BP0C0L5 1744 aa15.56■□□□□ 0.08
APTX-213ENST00000465003 PIP4K2AP48426 406 aaPredicted RBP15.55■□□□□ 0.08
APTX-213ENST00000465003 PHF14O94880 888 aa15.55■□□□□ 0.08
APTX-213ENST00000465003 COL5A3P25940 1745 aaPredicted RBP15.54■□□□□ 0.08
APTX-213ENST00000465003 MYH14Q7Z406 1995 aaKnown RBP15.54■□□□□ 0.08
APTX-213ENST00000465003 TSR2Q969E8 191 aaKnown RBP15.53■□□□□ 0.08
APTX-213ENST00000465003 SPINK5Q9NQ38 1064 aaPredicted RBP15.53■□□□□ 0.08
APTX-213ENST00000465003 HEG1Q9ULI3 1381 aa15.53■□□□□ 0.08
APTX-213ENST00000465003 SLC15A2Q16348 729 aa15.53■□□□□ 0.08
APTX-213ENST00000465003 MBIPQ9NS73 344 aa15.53■□□□□ 0.08
APTX-213ENST00000465003 TFCP2L1Q9NZI6 479 aa15.53■□□□□ 0.08
APTX-213ENST00000465003 NBPF14Q5TI25 921 aa15.52■□□□□ 0.07
APTX-213ENST00000465003 AKT1S1Q96B36 256 aa15.52■□□□□ 0.07
APTX-213ENST00000465003 FMNL2Q96PY5 1086 aa15.52■□□□□ 0.07
APTX-213ENST00000465003 STK32BQ9NY57 414 aa15.52■□□□□ 0.07
APTX-213ENST00000465003 GNPATO15228 680 aa15.51■□□□□ 0.07
APTX-213ENST00000465003 CRKLP46109 303 aaKnown RBP15.51■□□□□ 0.07
APTX-213ENST00000465003 EIF4A1P60842 406 aaKnown RBP15.51■□□□□ 0.07
APTX-213ENST00000465003 NECTIN2Q92692 538 aa15.51■□□□□ 0.07
APTX-213ENST00000465003 USP16Q9Y5T5 823 aa15.51■□□□□ 0.07
APTX-213ENST00000465003 AK7Q96M32 723 aa15.51■□□□□ 0.07
APTX-213ENST00000465003 GOLGB1Q14789 3259 aaKnown RBP15.5■□□□□ 0.07
APTX-213ENST00000465003 ELL2O00472 640 aaPredicted RBP15.5■□□□□ 0.07
APTX-213ENST00000465003 CHL1O00533 1208 aa15.5■□□□□ 0.07
APTX-213ENST00000465003 CFAP44Q96MT7 982 aa15.5■□□□□ 0.07
APTX-213ENST00000465003 ZNF330Q9Y3S2 320 aaPredicted RBP15.5■□□□□ 0.07
APTX-213ENST00000465003 UBR3Q6ZT12 1888 aa15.5■□□□□ 0.07
APTX-213ENST00000465003 HNRNPUQ00839 825 aaKnown RBP eCLIP15.49■□□□□ 0.07
APTX-213ENST00000465003 CCDC27Q2M243 656 aa15.49■□□□□ 0.07
APTX-213ENST00000465003 ZBTB1Q9Y2K1 713 aa15.49■□□□□ 0.07
APTX-213ENST00000465003 A1BGP04217 495 aa15.49■□□□□ 0.07
APTX-213ENST00000465003 CYP19A1P11511 503 aaPredicted RBP15.49■□□□□ 0.07
APTX-213ENST00000465003 PNPLA7Q6ZV29 1317 aa15.49■□□□□ 0.07
APTX-213ENST00000465003 ZNF831Q5JPB2 1677 aa15.48■□□□□ 0.07
APTX-213ENST00000465003 MSH5O43196 834 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms