RNA–Protein interactions for RNA: ENST00000464786.5

TSPAN1-202, Transcript of tetraspanin 1, humanhuman

TSL 5

Gene TSPAN1, Length 872 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-202ENST00000464786 ITGB4P16144 1822 aa17.65■□□□□ 0.42
TSPAN1-202ENST00000464786 CEMIPQ8WUJ3 1361 aa17.65■□□□□ 0.42
TSPAN1-202ENST00000464786 PALLDQ8WX93 1383 aa17.65■□□□□ 0.42
TSPAN1-202ENST00000464786 RGPD3A6NKT7 1758 aaPredicted RBP17.63■□□□□ 0.41
TSPAN1-202ENST00000464786 RGPD4Q7Z3J3 1758 aa17.63■□□□□ 0.41
TSPAN1-202ENST00000464786 LOC102724428A0A0B4J2F2 783 aa17.63■□□□□ 0.41
TSPAN1-202ENST00000464786 SIK1P57059 783 aa17.63■□□□□ 0.41
TSPAN1-202ENST00000464786 MCM10Q7L590 875 aa17.63■□□□□ 0.41
TSPAN1-202ENST00000464786 SCN11AQ9UI33 1791 aa17.63■□□□□ 0.41
TSPAN1-202ENST00000464786 TAF7Q15545 349 aaPredicted RBP17.62■□□□□ 0.41
TSPAN1-202ENST00000464786 LRRC4BQ9NT99 713 aa17.62■□□□□ 0.41
TSPAN1-202ENST00000464786 TOGARAM1Q9Y4F4 1720 aa17.61■□□□□ 0.41
TSPAN1-202ENST00000464786 BTBD11A6QL63 1104 aa17.61■□□□□ 0.41
TSPAN1-202ENST00000464786 APAF1O14727 1248 aa17.61■□□□□ 0.41
TSPAN1-202ENST00000464786 TTC5Q8N0Z6 440 aa17.61■□□□□ 0.41
TSPAN1-202ENST00000464786 RBM42Q9BTD8 480 aaKnown RBP17.61■□□□□ 0.41
TSPAN1-202ENST00000464786 STK32BQ9NY57 414 aa17.61■□□□□ 0.41
TSPAN1-202ENST00000464786 ATP6V1AP38606 617 aa17.6■□□□□ 0.41
TSPAN1-202ENST00000464786 DCTN1Q14203 1278 aa17.6■□□□□ 0.41
TSPAN1-202ENST00000464786 NEUROD2Q15784 382 aa17.6■□□□□ 0.41
TSPAN1-202ENST00000464786 NCBP3Q53F19 620 aaKnown RBP17.6■□□□□ 0.41
TSPAN1-202ENST00000464786 FAM9BQ8IZU0 186 aa17.6■□□□□ 0.41
TSPAN1-202ENST00000464786 ADAMTS7Q9UKP4 1686 aa17.59■□□□□ 0.41
TSPAN1-202ENST00000464786 PTCD1O75127 700 aaKnown RBP17.59■□□□□ 0.41
TSPAN1-202ENST00000464786 ZNF790Q6PG37 636 aa17.59■□□□□ 0.41
TSPAN1-202ENST00000464786 RRP7AQ9Y3A4 280 aaKnown RBP17.59■□□□□ 0.41
TSPAN1-202ENST00000464786 MRC1P22897 1456 aa17.58■□□□□ 0.41
TSPAN1-202ENST00000464786 SLC39A6Q13433 755 aa17.58■□□□□ 0.4
TSPAN1-202ENST00000464786 SLC15A2Q16348 729 aa17.58■□□□□ 0.4
TSPAN1-202ENST00000464786 VSIG10Q8N0Z9 540 aa17.58■□□□□ 0.4
TSPAN1-202ENST00000464786 NGEFQ8N5V2 710 aa17.58■□□□□ 0.4
TSPAN1-202ENST00000464786 BABAM1Q9NWV8 329 aa17.58■□□□□ 0.4
TSPAN1-202ENST00000464786 CALD1Q05682 793 aaKnown RBP17.57■□□□□ 0.4
TSPAN1-202ENST00000464786 MIER1Q8N108 512 aa17.57■□□□□ 0.4
TSPAN1-202ENST00000464786 RREB1Q92766 1687 aa17.56■□□□□ 0.4
TSPAN1-202ENST00000464786 KCNQ4P56696 695 aa17.56■□□□□ 0.4
TSPAN1-202ENST00000464786 AKT1S1Q96B36 256 aa17.56■□□□□ 0.4
TSPAN1-202ENST00000464786 FMNL2Q96PY5 1086 aa17.56■□□□□ 0.4
TSPAN1-202ENST00000464786 TEX13AQ9BXU3 409 aaPredicted RBP17.56■□□□□ 0.4
TSPAN1-202ENST00000464786 TRIM35Q9UPQ4 493 aa17.56■□□□□ 0.4
TSPAN1-202ENST00000464786 LY75O60449 1722 aa17.55■□□□□ 0.4
TSPAN1-202ENST00000464786 R3HDM1Q15032 1099 aaKnown RBP17.55■□□□□ 0.4
TSPAN1-202ENST00000464786 RC3H1Q5TC82 1133 aaKnown RBP17.55■□□□□ 0.4
TSPAN1-202ENST00000464786 CCDC27Q2M243 656 aa17.54■□□□□ 0.4
TSPAN1-202ENST00000464786 FLAD1Q8NFF5 587 aa17.54■□□□□ 0.4
TSPAN1-202ENST00000464786 THUMPD2Q9BTF0 503 aaKnown RBP17.54■□□□□ 0.4
TSPAN1-202ENST00000464786 TFCP2L1Q9NZI6 479 aa17.54■□□□□ 0.4
TSPAN1-202ENST00000464786 DLG5Q8TDM6 1919 aa17.53■□□□□ 0.4
TSPAN1-202ENST00000464786 ITPK1Q13572 414 aa17.53■□□□□ 0.4
TSPAN1-202ENST00000464786 SLC4A9Q96Q91 983 aa17.53■□□□□ 0.4
TSPAN1-202ENST00000464786 ANO8Q9HCE9 1232 aaPredicted RBP17.53■□□□□ 0.4
TSPAN1-202ENST00000464786 VIRMAQ69YN4 1812 aaKnown RBP17.53■□□□□ 0.4
TSPAN1-202ENST00000464786 STARD3NLO95772 234 aa17.52■□□□□ 0.4
TSPAN1-202ENST00000464786 ZNF496Q96IT1 587 aaPredicted RBP17.52■□□□□ 0.4
TSPAN1-202ENST00000464786 AK7Q96M32 723 aa17.52■□□□□ 0.4
TSPAN1-202ENST00000464786 NUP188Q5SRE5 1749 aa17.52■□□□□ 0.39
TSPAN1-202ENST00000464786 PSDA5PKW4 1024 aaPredicted RBP17.51■□□□□ 0.39
TSPAN1-202ENST00000464786 CHL1O00533 1208 aa17.51■□□□□ 0.39
TSPAN1-202ENST00000464786 LINC00116Q8NCU8 138 aa17.51■□□□□ 0.39
TSPAN1-202ENST00000464786 MIS18AQ9NYP9 233 aa17.51■□□□□ 0.39
TSPAN1-202ENST00000464786 TSPYL4Q9UJ04 414 aa17.51■□□□□ 0.39
TSPAN1-202ENST00000464786 KCNQ3O43525 872 aa17.5■□□□□ 0.39
TSPAN1-202ENST00000464786 SNRPA1P09661 255 aaKnown RBP17.5■□□□□ 0.39
TSPAN1-202ENST00000464786 ZNF827Q17R98 1081 aa17.5■□□□□ 0.39
TSPAN1-202ENST00000464786 HEG1Q9ULI3 1381 aa17.5■□□□□ 0.39
TSPAN1-202ENST00000464786 CNTNAP4Q9C0A0 1308 aa17.49■□□□□ 0.39
TSPAN1-202ENST00000464786 GNAI1P63096 354 aa17.49■□□□□ 0.39
TSPAN1-202ENST00000464786 WWC1Q8IX03 1113 aa17.49■□□□□ 0.39
TSPAN1-202ENST00000464786 DNAJC10Q8IXB1 793 aa17.49■□□□□ 0.39
TSPAN1-202ENST00000464786 CFAP44Q96MT7 982 aa17.49■□□□□ 0.39
TSPAN1-202ENST00000464786 ZNF831Q5JPB2 1677 aa17.48■□□□□ 0.39
TSPAN1-202ENST00000464786 SIPA1L3O60292 1781 aaPredicted RBP17.48■□□□□ 0.39
TSPAN1-202ENST00000464786 RPS6KA4O75676 772 aa17.48■□□□□ 0.39
TSPAN1-202ENST00000464786 CYP19A1P11511 503 aaPredicted RBP17.48■□□□□ 0.39
TSPAN1-202ENST00000464786 SLC16A10Q8TF71 515 aa17.48■□□□□ 0.39
TSPAN1-202ENST00000464786 IFT57Q9NWB7 429 aa17.48■□□□□ 0.39
TSPAN1-202ENST00000464786 RTCBQ9Y3I0 505 aaKnown RBP17.48■□□□□ 0.39
TSPAN1-202ENST00000464786 LAS1LQ9Y4W2 734 aaKnown RBP17.48■□□□□ 0.39
TSPAN1-202ENST00000464786 SSFA2P28290 1259 aa17.47■□□□□ 0.39
TSPAN1-202ENST00000464786 CRKLP46109 303 aaKnown RBP17.47■□□□□ 0.39
TSPAN1-202ENST00000464786 EIF4A1P60842 406 aaKnown RBP17.47■□□□□ 0.39
TSPAN1-202ENST00000464786 WDR63Q8IWG1 891 aa17.47■□□□□ 0.39
TSPAN1-202ENST00000464786 GNPATO15228 680 aa17.46■□□□□ 0.39
TSPAN1-202ENST00000464786 ADRA2BP18089 450 aa17.46■□□□□ 0.39
TSPAN1-202ENST00000464786 TRAPPC3LQ5T215 181 aa17.46■□□□□ 0.39
TSPAN1-202ENST00000464786 CCDC87Q9NVE4 849 aa17.46■□□□□ 0.39
TSPAN1-202ENST00000464786 KCPQ6ZWJ8 1503 aa17.46■□□□□ 0.39
TSPAN1-202ENST00000464786 IL16Q14005 1332 aa17.46■□□□□ 0.38
TSPAN1-202ENST00000464786 ZNF853P0CG23 659 aa17.45■□□□□ 0.38
TSPAN1-202ENST00000464786 PAPPAQ13219 1627 aa17.45■□□□□ 0.38
TSPAN1-202ENST00000464786 PNPLA7Q6ZV29 1317 aa17.45■□□□□ 0.38
TSPAN1-202ENST00000464786 MSH5O43196 834 aa17.44■□□□□ 0.38
TSPAN1-202ENST00000464786 GIGYF1O75420 1035 aaPredicted RBP17.44■□□□□ 0.38
TSPAN1-202ENST00000464786 INTS5Q6P9B9 1019 aaKnown RBP17.44■□□□□ 0.38
TSPAN1-202ENST00000464786 SALL2Q9Y467 1007 aaPredicted RBP17.44■□□□□ 0.38
TSPAN1-202ENST00000464786 USP16Q9Y5T5 823 aa17.44■□□□□ 0.38
TSPAN1-202ENST00000464786 C5P01031 1676 aa17.44■□□□□ 0.38
TSPAN1-202ENST00000464786 TAF1LQ8IZX4 1826 aa17.44■□□□□ 0.38
TSPAN1-202ENST00000464786 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.43■□□□□ 0.38
TSPAN1-202ENST00000464786 COL23A1Q86Y22 540 aaPredicted RBP17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms