RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 CHMLP26374 656 aa15.28■□□□□ 0.04
CLCNKA-204ENST00000464764 PLCB2Q00722 1185 aa15.28■□□□□ 0.04
CLCNKA-204ENST00000464764 HMMRO75330 724 aa15.27■□□□□ 0.03
CLCNKA-204ENST00000464764 TXNDC2Q86VQ3 553 aa15.27■□□□□ 0.03
CLCNKA-204ENST00000464764 OSBPL3Q9H4L5 887 aa15.27■□□□□ 0.03
CLCNKA-204ENST00000464764 MYO5BQ9ULV0 1848 aa15.26■□□□□ 0.03
CLCNKA-204ENST00000464764 HCLS1P14317 486 aaPredicted RBP15.26■□□□□ 0.03
CLCNKA-204ENST00000464764 CNPY2Q9Y2B0 182 aa15.26■□□□□ 0.03
CLCNKA-204ENST00000464764 NUTM2FA1L443 756 aa15.26■□□□□ 0.03
CLCNKA-204ENST00000464764 DLG5Q8TDM6 1919 aa15.26■□□□□ 0.03
CLCNKA-204ENST00000464764 ADCY5O95622 1261 aa15.25■□□□□ 0.03
CLCNKA-204ENST00000464764 MX1P20591 662 aa15.25■□□□□ 0.03
CLCNKA-204ENST00000464764 HSP90AB2PQ58FF8 381 aa15.25■□□□□ 0.03
CLCNKA-204ENST00000464764 IL1RAPL2Q9NP60 686 aa15.25■□□□□ 0.03
CLCNKA-204ENST00000464764 KIF20BQ96Q89 1820 aa15.25■□□□□ 0.03
CLCNKA-204ENST00000464764 NUDT16Q96DE0 195 aaKnown RBP15.25■□□□□ 0.03
CLCNKA-204ENST00000464764 SRCIN1Q9C0H9 1055 aa15.25■□□□□ 0.03
CLCNKA-204ENST00000464764 PTPRCP08575 1304 aa15.25■□□□□ 0.03
CLCNKA-204ENST00000464764 NOLC1Q14978 699 aaKnown RBP eCLIP15.25■□□□□ 0.03
CLCNKA-204ENST00000464764 ZNF710Q8N1W2 664 aa15.25■□□□□ 0.03
CLCNKA-204ENST00000464764 ZHX1Q9UKY1 873 aaPredicted RBP15.25■□□□□ 0.03
CLCNKA-204ENST00000464764 WASLO00401 505 aaPredicted RBP15.24■□□□□ 0.03
CLCNKA-204ENST00000464764 LRRCC1Q9C099 1032 aa15.24■□□□□ 0.03
CLCNKA-204ENST00000464764 SALL3Q9BXA9 1300 aa15.24■□□□□ 0.03
CLCNKA-204ENST00000464764 GNAI2P04899 355 aa15.23■□□□□ 0.03
CLCNKA-204ENST00000464764 MCCP23508 829 aa15.23■□□□□ 0.03
CLCNKA-204ENST00000464764 MYRIPQ8NFW9 859 aa15.23■□□□□ 0.03
CLCNKA-204ENST00000464764 SYAP1Q96A49 352 aaPredicted RBP15.23■□□□□ 0.03
CLCNKA-204ENST00000464764 MCM2P49736 904 aa15.23■□□□□ 0.03
CLCNKA-204ENST00000464764 NUTM1Q86Y26 1132 aa15.23■□□□□ 0.03
CLCNKA-204ENST00000464764 CPS1P31327 1500 aa15.23■□□□□ 0.03
CLCNKA-204ENST00000464764 ALKQ9UM73 1620 aa15.23■□□□□ 0.03
CLCNKA-204ENST00000464764 CPA1P15085 419 aa15.23■□□□□ 0.03
CLCNKA-204ENST00000464764 INTS4Q96HW7 963 aaKnown RBP15.23■□□□□ 0.03
CLCNKA-204ENST00000464764 CDK12Q9NYV4 1490 aaPredicted RBP15.22■□□□□ 0.03
CLCNKA-204ENST00000464764 CPSF1Q10570 1443 aaKnown RBP15.22■□□□□ 0.03
CLCNKA-204ENST00000464764 TSPYL4Q9UJ04 414 aa15.22■□□□□ 0.03
CLCNKA-204ENST00000464764 AP5Z1O43299 807 aa15.21■□□□□ 0.03
CLCNKA-204ENST00000464764 FIBPO43427 364 aa15.21■□□□□ 0.03
CLCNKA-204ENST00000464764 GIMAP6Q6P9H5 292 aa15.21■□□□□ 0.03
CLCNKA-204ENST00000464764 PIBF1Q8WXW3 757 aa15.21■□□□□ 0.03
CLCNKA-204ENST00000464764 CLTCQ00610 1675 aaKnown RBP15.21■□□□□ 0.03
CLCNKA-204ENST00000464764 EDC4Q6P2E9 1401 aaKnown RBP15.21■□□□□ 0.03
CLCNKA-204ENST00000464764 CBX1P83916 185 aa15.21■□□□□ 0.03
CLCNKA-204ENST00000464764 LRRFIP2Q9Y608 721 aaKnown RBP15.2■□□□□ 0.02
CLCNKA-204ENST00000464764 A0A0U1RQG5 324 aaPredicted RBP15.2■□□□□ 0.02
CLCNKA-204ENST00000464764 AATKQ6ZMQ8 1374 aa15.2■□□□□ 0.02
CLCNKA-204ENST00000464764 KIAA0232Q92628 1395 aa15.2■□□□□ 0.02
CLCNKA-204ENST00000464764 WDR33Q9C0J8 1336 aaKnown RBP15.2■□□□□ 0.02
CLCNKA-204ENST00000464764 ATP7BP35670 1465 aa15.2■□□□□ 0.02
CLCNKA-204ENST00000464764 FKBP5Q13451 457 aaPredicted RBP15.2■□□□□ 0.02
CLCNKA-204ENST00000464764 CCDC94Q9BW85 323 aaPredicted RBP15.2■□□□□ 0.02
CLCNKA-204ENST00000464764 TCHHQ07283 1943 aa15.2■□□□□ 0.02
CLCNKA-204ENST00000464764 RPAP1Q9BWH6 1393 aaPredicted RBP15.19■□□□□ 0.02
CLCNKA-204ENST00000464764 CCT4P50991 539 aaKnown RBP15.19■□□□□ 0.02
CLCNKA-204ENST00000464764 RASEFQ8IZ41 740 aa15.19■□□□□ 0.02
CLCNKA-204ENST00000464764 DDX54Q8TDD1 881 aaKnown RBP15.19■□□□□ 0.02
CLCNKA-204ENST00000464764 CCDC61Q9Y6R9 512 aa15.19■□□□□ 0.02
CLCNKA-204ENST00000464764 TMEM131LA2VDJ0 1609 aa15.19■□□□□ 0.02
CLCNKA-204ENST00000464764 PHF14O94880 888 aa15.19■□□□□ 0.02
CLCNKA-204ENST00000464764 ANAPC15P60006 121 aa15.19■□□□□ 0.02
CLCNKA-204ENST00000464764 MTHFSDQ2M296 383 aaKnown RBP15.19■□□□□ 0.02
CLCNKA-204ENST00000464764 SPC24Q8NBT2 197 aa15.19■□□□□ 0.02
CLCNKA-204ENST00000464764 HAP1P54257 671 aaPredicted RBP15.18■□□□□ 0.02
CLCNKA-204ENST00000464764 CCDC183Q5T5S1 534 aa15.18■□□□□ 0.02
CLCNKA-204ENST00000464764 MTERF4Q7Z6M4 381 aaKnown RBP15.18■□□□□ 0.02
CLCNKA-204ENST00000464764 SMAP1Q8IYB5 467 aaPredicted RBP15.18■□□□□ 0.02
CLCNKA-204ENST00000464764 SYT1P21579 422 aa15.18■□□□□ 0.02
CLCNKA-204ENST00000464764 ATP8B2P98198 1209 aa15.18■□□□□ 0.02
CLCNKA-204ENST00000464764 ATP2B3Q16720 1220 aa15.18■□□□□ 0.02
CLCNKA-204ENST00000464764 CHMP3Q9Y3E7 222 aa15.18■□□□□ 0.02
CLCNKA-204ENST00000464764 LARGE1O95461 756 aa15.17■□□□□ 0.02
CLCNKA-204ENST00000464764 AK2P54819 239 aa15.17■□□□□ 0.02
CLCNKA-204ENST00000464764 PYCARDQ9ULZ3 195 aa15.17■□□□□ 0.02
CLCNKA-204ENST00000464764 HSPA4P34932 840 aa15.17■□□□□ 0.02
CLCNKA-204ENST00000464764 BCL11BQ9C0K0 894 aaPredicted RBP15.17■□□□□ 0.02
CLCNKA-204ENST00000464764 SPG7Q9UQ90 795 aa15.17■□□□□ 0.02
CLCNKA-204ENST00000464764 CRB1P82279 1406 aa15.17■□□□□ 0.02
CLCNKA-204ENST00000464764 PRR36Q9H6K5 1346 aa15.17■□□□□ 0.02
CLCNKA-204ENST00000464764 SPDYE4A6NLX3 237 aa15.16■□□□□ 0.02
CLCNKA-204ENST00000464764 KDM4AO75164 1064 aa15.16■□□□□ 0.02
CLCNKA-204ENST00000464764 ZSCAN22P10073 491 aaPredicted RBP15.16■□□□□ 0.02
CLCNKA-204ENST00000464764 FLIIQ13045 1269 aa15.16■□□□□ 0.02
CLCNKA-204ENST00000464764 RUFY3Q7L099 469 aa15.16■□□□□ 0.02
CLCNKA-204ENST00000464764 PPP4R3BQ5MIZ7 849 aa15.16■□□□□ 0.02
CLCNKA-204ENST00000464764 KCNF1Q9H3M0 494 aa15.16■□□□□ 0.02
CLCNKA-204ENST00000464764 SNX14Q9Y5W7 946 aa15.16■□□□□ 0.02
CLCNKA-204ENST00000464764 STX6O43752 255 aa15.15■□□□□ 0.02
CLCNKA-204ENST00000464764 ZSCAN20P17040 1043 aaPredicted RBP15.15■□□□□ 0.02
CLCNKA-204ENST00000464764 DNM1Q05193 864 aaKnown RBP15.15■□□□□ 0.02
CLCNKA-204ENST00000464764 UVSSAQ2YD98 709 aa15.15■□□□□ 0.02
CLCNKA-204ENST00000464764 FAM184AQ8NB25 1140 aa15.15■□□□□ 0.02
CLCNKA-204ENST00000464764 METP08581 1390 aa15.15■□□□□ 0.02
CLCNKA-204ENST00000464764 RTF1Q92541 710 aaKnown RBP15.15■□□□□ 0.02
CLCNKA-204ENST00000464764 BCL2L12Q9HB09 334 aa15.15■□□□□ 0.02
CLCNKA-204ENST00000464764 MAP3K19Q56UN5 1328 aa15.15■□□□□ 0.02
CLCNKA-204ENST00000464764 STK31Q9BXU1 1019 aa15.15■□□□□ 0.02
CLCNKA-204ENST00000464764 STAP2Q9UGK3 403 aa15.15■□□□□ 0.02
CLCNKA-204ENST00000464764 CWC27Q6UX04 472 aaKnown RBP15.14■□□□□ 0.01
CLCNKA-204ENST00000464764 PRIMPOLQ96LW4 560 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms