RNA–Protein interactions for RNA: ENST00000464710.1

IL6-208, Transcript of interleukin 6, human

TSL 4

Gene IL6, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IL6-208	ENST00000464710	WWC1	Q8IX03	1113 aa		10.91	□□□□□ -0.66
IL6-208	ENST00000464710	BCL9	O00512	1426 aa		10.91	□□□□□ -0.66
IL6-208	ENST00000464710	WNK3	Q9BYP7	1800 aa		10.91	□□□□□ -0.66
IL6-208	ENST00000464710	PLSCR1	O15162	318 aa		10.9	□□□□□ -0.66
IL6-208	ENST00000464710	EZH2	Q15910	746 aa	Known RBP	10.9	□□□□□ -0.66
IL6-208	ENST00000464710	NGEF	Q8N5V2	710 aa		10.9	□□□□□ -0.66
IL6-208	ENST00000464710	TSPYL4	Q9UJ04	414 aa		10.9	□□□□□ -0.66
IL6-208	ENST00000464710	KDM6A	O15550	1401 aa	Predicted RBP	10.9	□□□□□ -0.66
IL6-208	ENST00000464710	PKD1L3	Q7Z443	1732 aa		10.89	□□□□□ -0.67
IL6-208	ENST00000464710	SOCS7	O14512	581 aa		10.89	□□□□□ -0.67
IL6-208	ENST00000464710	KCNQ3	O43525	872 aa		10.89	□□□□□ -0.67
IL6-208	ENST00000464710	ATP6V1A	P38606	617 aa		10.89	□□□□□ -0.67
IL6-208	ENST00000464710	KCNQ4	P56696	695 aa		10.89	□□□□□ -0.67
IL6-208	ENST00000464710	CCDC27	Q2M243	656 aa		10.89	□□□□□ -0.67
IL6-208	ENST00000464710	YTHDC1	Q96MU7	727 aa	Known RBP	10.89	□□□□□ -0.67
IL6-208	ENST00000464710	GNAI1	P63096	354 aa		10.88	□□□□□ -0.67
IL6-208	ENST00000464710	TXNRD1	Q16881	649 aa		10.88	□□□□□ -0.67
IL6-208	ENST00000464710	NCBP3	Q53F19	620 aa	Known RBP	10.88	□□□□□ -0.67
IL6-208	ENST00000464710	ZNF790	Q6PG37	636 aa		10.88	□□□□□ -0.67
IL6-208	ENST00000464710	WDR63	Q8IWG1	891 aa		10.88	□□□□□ -0.67
IL6-208	ENST00000464710	CCNL1	Q9UK58	526 aa	Predicted RBP	10.88	□□□□□ -0.67
IL6-208	ENST00000464710	CEMIP	Q8WUJ3	1361 aa		10.88	□□□□□ -0.67
IL6-208	ENST00000464710	LOC102724428	A0A0B4J2F2	783 aa		10.87	□□□□□ -0.67
IL6-208	ENST00000464710	SIK1	P57059	783 aa		10.87	□□□□□ -0.67
IL6-208	ENST00000464710	CFAP44	Q96MT7	982 aa		10.87	□□□□□ -0.67
IL6-208	ENST00000464710	FMNL2	Q96PY5	1086 aa		10.87	□□□□□ -0.67
IL6-208	ENST00000464710	CAMKK2	Q96RR4	588 aa		10.87	□□□□□ -0.67
IL6-208	ENST00000464710	PALLD	Q8WX93	1383 aa		10.87	□□□□□ -0.67
IL6-208	ENST00000464710	SHANK3	Q9BYB0	1731 aa		10.87	□□□□□ -0.67
IL6-208	ENST00000464710	CHL1	O00533	1208 aa		10.86	□□□□□ -0.67
IL6-208	ENST00000464710	GOLGA2	Q08379	1002 aa		10.86	□□□□□ -0.67
IL6-208	ENST00000464710	PROM2	Q8N271	834 aa		10.86	□□□□□ -0.67
IL6-208	ENST00000464710	IFT57	Q9NWB7	429 aa		10.86	□□□□□ -0.67
IL6-208	ENST00000464710	BABAM1	Q9NWV8	329 aa		10.86	□□□□□ -0.67
IL6-208	ENST00000464710	ELL2	O00472	640 aa	Predicted RBP	10.85	□□□□□ -0.67
IL6-208	ENST00000464710	HMGB2	P26583	209 aa	Known RBP	10.85	□□□□□ -0.67
IL6-208	ENST00000464710	SLC27A3	Q5K4L6	730 aa		10.85	□□□□□ -0.67
IL6-208	ENST00000464710	NBPF14	Q5TI25	921 aa		10.85	□□□□□ -0.67
IL6-208	ENST00000464710	ZNF496	Q96IT1	587 aa	Predicted RBP	10.85	□□□□□ -0.67
IL6-208	ENST00000464710	SNRPA1	P09661	255 aa	Known RBP	10.84	□□□□□ -0.67
IL6-208	ENST00000464710	EIF2S2	P20042	333 aa	Known RBP	10.84	□□□□□ -0.67
IL6-208	ENST00000464710	EIF4A1	P60842	406 aa	Known RBP	10.84	□□□□□ -0.67
IL6-208	ENST00000464710	DNAJC10	Q8IXB1	793 aa		10.84	□□□□□ -0.67
IL6-208	ENST00000464710	TSR2	Q969E8	191 aa	Known RBP	10.84	□□□□□ -0.67
IL6-208	ENST00000464710	TEX13A	Q9BXU3	409 aa	Predicted RBP	10.84	□□□□□ -0.67
IL6-208	ENST00000464710	MYH16	Q9H6N6	1097 aa		10.84	□□□□□ -0.67
IL6-208	ENST00000464710	MBIP	Q9NS73	344 aa		10.84	□□□□□ -0.67
IL6-208	ENST00000464710	LRRC4B	Q9NT99	713 aa		10.84	□□□□□ -0.67
IL6-208	ENST00000464710	DOT1L	Q8TEK3	1739 aa		10.84	□□□□□ -0.67
IL6-208	ENST00000464710	ZNF853	P0CG23	659 aa		10.83	□□□□□ -0.68
IL6-208	ENST00000464710	CDCA7L	Q96GN5	454 aa		10.83	□□□□□ -0.68
IL6-208	ENST00000464710	IL16	Q14005	1332 aa		10.83	□□□□□ -0.68
IL6-208	ENST00000464710		E9PSI1	815 aa		10.82	□□□□□ -0.68
IL6-208	ENST00000464710	MSH5	O43196	834 aa		10.82	□□□□□ -0.68
IL6-208	ENST00000464710	STARD3NL	O95772	234 aa		10.82	□□□□□ -0.68
IL6-208	ENST00000464710	ITPK1	Q13572	414 aa		10.82	□□□□□ -0.68
IL6-208	ENST00000464710	NPM2	Q86SE8	214 aa	Known RBP	10.82	□□□□□ -0.68
IL6-208	ENST00000464710	VSIG10	Q8N0Z9	540 aa		10.82	□□□□□ -0.68
IL6-208	ENST00000464710	NECTIN2	Q92692	538 aa		10.82	□□□□□ -0.68
IL6-208	ENST00000464710	SLC4A9	Q96Q91	983 aa		10.82	□□□□□ -0.68
IL6-208	ENST00000464710	ARX	Q96QS3	562 aa		10.82	□□□□□ -0.68
IL6-208	ENST00000464710	SPINK5	Q9NQ38	1064 aa	Predicted RBP	10.82	□□□□□ -0.68
IL6-208	ENST00000464710	STK32B	Q9NY57	414 aa		10.82	□□□□□ -0.68
IL6-208	ENST00000464710	USP16	Q9Y5T5	823 aa		10.82	□□□□□ -0.68
IL6-208	ENST00000464710	DLG5	Q8TDM6	1919 aa		10.82	□□□□□ -0.68
IL6-208	ENST00000464710	SBF2	Q86WG5	1849 aa		10.81	□□□□□ -0.68
IL6-208	ENST00000464710	SCN11A	Q9UI33	1791 aa		10.81	□□□□□ -0.68
IL6-208	ENST00000464710	PRAMEF22	A3QJZ6	481 aa		10.81	□□□□□ -0.68
IL6-208	ENST00000464710	CANX	P27824	592 aa	Known RBP	10.81	□□□□□ -0.68
IL6-208	ENST00000464710	SLFN5	Q08AF3	891 aa		10.81	□□□□□ -0.68
IL6-208	ENST00000464710	KRT24	Q2M2I5	525 aa		10.81	□□□□□ -0.68
IL6-208	ENST00000464710	AK7	Q96M32	723 aa		10.81	□□□□□ -0.68
IL6-208	ENST00000464710	TFCP2L1	Q9NZI6	479 aa		10.81	□□□□□ -0.68
IL6-208	ENST00000464710	NHS	Q6T4R5	1651 aa		10.81	□□□□□ -0.68
IL6-208	ENST00000464710	ITGB4	P16144	1822 aa		10.81	□□□□□ -0.68
IL6-208	ENST00000464710	HEG1	Q9ULI3	1381 aa		10.8	□□□□□ -0.68
IL6-208	ENST00000464710	GIGYF1	O75420	1035 aa	Predicted RBP	10.8	□□□□□ -0.68
IL6-208	ENST00000464710	A1BG	P04217	495 aa		10.8	□□□□□ -0.68
IL6-208	ENST00000464710	EXOSC9	Q06265	439 aa	Known RBP	10.8	□□□□□ -0.68
IL6-208	ENST00000464710	DUSP27	Q5VZP5	1158 aa		10.8	□□□□□ -0.68
IL6-208	ENST00000464710	C8orf58	Q8NAV2	365 aa		10.8	□□□□□ -0.68
IL6-208	ENST00000464710	LINC00116	Q8NCU8	138 aa		10.8	□□□□□ -0.68
IL6-208	ENST00000464710	ZNF330	Q9Y3S2	320 aa	Predicted RBP	10.8	□□□□□ -0.68
IL6-208	ENST00000464710	TOGARAM1	Q9Y4F4	1720 aa		10.8	□□□□□ -0.68
IL6-208	ENST00000464710	ZNF521	Q96K83	1311 aa		10.8	□□□□□ -0.68
IL6-208	ENST00000464710	PHF14	O94880	888 aa		10.79	□□□□□ -0.68
IL6-208	ENST00000464710	CYP19A1	P11511	503 aa	Predicted RBP	10.79	□□□□□ -0.68
IL6-208	ENST00000464710	CRKL	P46109	303 aa	Known RBP	10.79	□□□□□ -0.68
IL6-208	ENST00000464710	SLC15A2	Q16348	729 aa		10.79	□□□□□ -0.68
IL6-208	ENST00000464710	MRC1	P22897	1456 aa		10.79	□□□□□ -0.68
IL6-208	ENST00000464710	FANCI	Q9NVI1	1328 aa		10.79	□□□□□ -0.68
IL6-208	ENST00000464710	BTAF1	O14981	1849 aa		10.79	□□□□□ -0.68
IL6-208	ENST00000464710	TCERG1	O14776	1098 aa	Known RBP	10.78	□□□□□ -0.68
IL6-208	ENST00000464710	GNPAT	O15228	680 aa		10.78	□□□□□ -0.68
IL6-208	ENST00000464710	MYL6B	P14649	208 aa		10.78	□□□□□ -0.68
IL6-208	ENST00000464710	PIP4K2A	P48426	406 aa	Predicted RBP	10.78	□□□□□ -0.68
IL6-208	ENST00000464710	TWISTNB	Q3B726	338 aa	Predicted RBP	10.78	□□□□□ -0.68
IL6-208	ENST00000464710	TRAPPC3L	Q5T215	181 aa		10.78	□□□□□ -0.68
IL6-208	ENST00000464710	SMIM5	Q71RC9	77 aa		10.78	□□□□□ -0.68
IL6-208	ENST00000464710	TSPYL6	Q8N831	410 aa		10.78	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms