RNA–Protein interactions for RNA: ENST00000463315.1

SEMA3D-203, Transcript of semaphorin 3D, humanhuman

TSL 2

Gene SEMA3D, Length 1,257 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-203ENST00000463315 NEFMP07197 916 aa18.25■□□□□ 0.51
SEMA3D-203ENST00000463315 NUP188Q5SRE5 1749 aa18.24■□□□□ 0.51
SEMA3D-203ENST00000463315 ITGB4P16144 1822 aa18.24■□□□□ 0.51
SEMA3D-203ENST00000463315 ANP32CO43423 234 aa18.24■□□□□ 0.51
SEMA3D-203ENST00000463315 GNAT3A8MTJ3 354 aa18.23■□□□□ 0.51
SEMA3D-203ENST00000463315 PHACTR3Q96KR7 559 aa18.23■□□□□ 0.51
SEMA3D-203ENST00000463315 ADAMTS7Q9UKP4 1686 aa18.22■□□□□ 0.51
SEMA3D-203ENST00000463315 MAP3K5Q99683 1374 aa18.22■□□□□ 0.51
SEMA3D-203ENST00000463315 CABP4P57796 275 aa18.22■□□□□ 0.51
SEMA3D-203ENST00000463315 LY75O60449 1722 aa18.22■□□□□ 0.51
SEMA3D-203ENST00000463315 PALLDQ8WX93 1383 aa18.21■□□□□ 0.51
SEMA3D-203ENST00000463315 RNMTO43148 476 aaKnown RBP18.21■□□□□ 0.51
SEMA3D-203ENST00000463315 HTATSF1O43719 755 aaKnown RBP18.21■□□□□ 0.51
SEMA3D-203ENST00000463315 PLEKHF1Q96S99 279 aa18.21■□□□□ 0.51
SEMA3D-203ENST00000463315 MRC1P22897 1456 aa18.2■□□□□ 0.5
SEMA3D-203ENST00000463315 SCN11AQ9UI33 1791 aa18.2■□□□□ 0.5
SEMA3D-203ENST00000463315 SLC52A2Q9HAB3 445 aa18.2■□□□□ 0.5
SEMA3D-203ENST00000463315 POLA2Q14181 598 aa18.19■□□□□ 0.5
SEMA3D-203ENST00000463315 WDR43Q15061 677 aaKnown RBP eCLIP18.19■□□□□ 0.5
SEMA3D-203ENST00000463315 NFATC2IPQ8NCF5 419 aa18.19■□□□□ 0.5
SEMA3D-203ENST00000463315 LGR6Q9HBX8 967 aa18.19■□□□□ 0.5
SEMA3D-203ENST00000463315 LRRC4BQ9NT99 713 aa18.19■□□□□ 0.5
SEMA3D-203ENST00000463315 CEMIPQ8WUJ3 1361 aa18.18■□□□□ 0.5
SEMA3D-203ENST00000463315 ATG3Q9NT62 314 aa18.18■□□□□ 0.5
SEMA3D-203ENST00000463315 CCNL1Q9UK58 526 aaPredicted RBP18.18■□□□□ 0.5
SEMA3D-203ENST00000463315 PAPPAQ13219 1627 aa18.17■□□□□ 0.5
SEMA3D-203ENST00000463315 SLC15A2Q16348 729 aa18.17■□□□□ 0.5
SEMA3D-203ENST00000463315 STK32BQ9NY57 414 aa18.17■□□□□ 0.5
SEMA3D-203ENST00000463315 ASAP1Q9ULH1 1129 aa18.17■□□□□ 0.5
SEMA3D-203ENST00000463315 ZNF831Q5JPB2 1677 aa18.16■□□□□ 0.5
SEMA3D-203ENST00000463315 LOC102724428A0A0B4J2F2 783 aa18.16■□□□□ 0.5
SEMA3D-203ENST00000463315 SIK1P57059 783 aa18.16■□□□□ 0.5
SEMA3D-203ENST00000463315 IL17REQ8NFR9 667 aa18.16■□□□□ 0.5
SEMA3D-203ENST00000463315 MAPK8IP3Q9UPT6 1336 aa18.16■□□□□ 0.5
SEMA3D-203ENST00000463315 R3HDM1Q15032 1099 aaKnown RBP18.15■□□□□ 0.5
SEMA3D-203ENST00000463315 RTF1Q92541 710 aaKnown RBP18.15■□□□□ 0.5
SEMA3D-203ENST00000463315 ANO8Q9HCE9 1232 aaPredicted RBP18.15■□□□□ 0.5
SEMA3D-203ENST00000463315 TEFQ10587 303 aa18.14■□□□□ 0.49
SEMA3D-203ENST00000463315 NFE2L2Q16236 605 aa18.14■□□□□ 0.49
SEMA3D-203ENST00000463315 AKT1S1Q96B36 256 aa18.14■□□□□ 0.49
SEMA3D-203ENST00000463315 ADAMTS8Q9UP79 889 aa18.14■□□□□ 0.49
SEMA3D-203ENST00000463315 RUNDC1Q96C34 613 aa18.13■□□□□ 0.49
SEMA3D-203ENST00000463315 PSDA5PKW4 1024 aaPredicted RBP18.11■□□□□ 0.49
SEMA3D-203ENST00000463315 VIRMAQ69YN4 1812 aaKnown RBP18.1■□□□□ 0.49
SEMA3D-203ENST00000463315 ATP6V1AP38606 617 aa18.1■□□□□ 0.49
SEMA3D-203ENST00000463315 LMOD3Q0VAK6 560 aa18.1■□□□□ 0.49
SEMA3D-203ENST00000463315 C5P01031 1676 aa18.09■□□□□ 0.49
SEMA3D-203ENST00000463315 CICQ96RK0 1608 aaPredicted RBP18.09■□□□□ 0.49
SEMA3D-203ENST00000463315 SRCAPQ6ZRS2 3230 aa18.09■□□□□ 0.49
SEMA3D-203ENST00000463315 VSIG10Q8N0Z9 540 aa18.09■□□□□ 0.49
SEMA3D-203ENST00000463315 FLAD1Q8NFF5 587 aa18.09■□□□□ 0.49
SEMA3D-203ENST00000463315 QSER1Q2KHR3 1735 aa18.09■□□□□ 0.49
SEMA3D-203ENST00000463315 TAF1LQ8IZX4 1826 aa18.08■□□□□ 0.48
SEMA3D-203ENST00000463315 TMPOP42166 694 aaKnown RBP18.08■□□□□ 0.48
SEMA3D-203ENST00000463315 KCNQ4P56696 695 aa18.08■□□□□ 0.48
SEMA3D-203ENST00000463315 ZNF827Q17R98 1081 aa18.08■□□□□ 0.48
SEMA3D-203ENST00000463315 RC3H1Q5TC82 1133 aaKnown RBP18.08■□□□□ 0.48
SEMA3D-203ENST00000463315 ZNF790Q6PG37 636 aa18.08■□□□□ 0.48
SEMA3D-203ENST00000463315 PNISRQ8TF01 805 aaKnown RBP18.08■□□□□ 0.48
SEMA3D-203ENST00000463315 SLC16A10Q8TF71 515 aa18.08■□□□□ 0.48
SEMA3D-203ENST00000463315 RBM42Q9BTD8 480 aaKnown RBP18.08■□□□□ 0.48
SEMA3D-203ENST00000463315 SIPA1L3O60292 1781 aaPredicted RBP18.07■□□□□ 0.48
SEMA3D-203ENST00000463315 MCM10Q7L590 875 aa18.07■□□□□ 0.48
SEMA3D-203ENST00000463315 TTC5Q8N0Z6 440 aa18.07■□□□□ 0.48
SEMA3D-203ENST00000463315 SLC4A9Q96Q91 983 aa18.07■□□□□ 0.48
SEMA3D-203ENST00000463315 MRS2Q9HD23 443 aa18.07■□□□□ 0.48
SEMA3D-203ENST00000463315 TFCP2L1Q9NZI6 479 aa18.07■□□□□ 0.48
SEMA3D-203ENST00000463315 PTCD1O75127 700 aaKnown RBP18.06■□□□□ 0.48
SEMA3D-203ENST00000463315 ATXN8OSP0DMR3 200 aa18.06■□□□□ 0.48
SEMA3D-203ENST00000463315 RIPK4P57078 832 aa18.06■□□□□ 0.48
SEMA3D-203ENST00000463315 ITPK1Q13572 414 aa18.06■□□□□ 0.48
SEMA3D-203ENST00000463315 TAF7Q15545 349 aaPredicted RBP18.06■□□□□ 0.48
SEMA3D-203ENST00000463315 C4BP0C0L5 1744 aa18.06■□□□□ 0.48
SEMA3D-203ENST00000463315 CNTNAP4Q9C0A0 1308 aa18.05■□□□□ 0.48
SEMA3D-203ENST00000463315 KCPQ6ZWJ8 1503 aa18.05■□□□□ 0.48
SEMA3D-203ENST00000463315 BTBD11A6QL63 1104 aa18.05■□□□□ 0.48
SEMA3D-203ENST00000463315 CCDC184Q52MB2 194 aa18.05■□□□□ 0.48
SEMA3D-203ENST00000463315 LINC00116Q8NCU8 138 aa18.05■□□□□ 0.48
SEMA3D-203ENST00000463315 TEX13AQ9BXU3 409 aaPredicted RBP18.05■□□□□ 0.48
SEMA3D-203ENST00000463315 BABAM1Q9NWV8 329 aa18.05■□□□□ 0.48
SEMA3D-203ENST00000463315 CASZ1Q86V15 1759 aa18.04■□□□□ 0.48
SEMA3D-203ENST00000463315 DLG5Q8TDM6 1919 aa18.04■□□□□ 0.48
SEMA3D-203ENST00000463315 SSFA2P28290 1259 aa18.04■□□□□ 0.48
SEMA3D-203ENST00000463315 SLC39A6Q13433 755 aa18.04■□□□□ 0.48
SEMA3D-203ENST00000463315 AK7Q96M32 723 aa18.04■□□□□ 0.48
SEMA3D-203ENST00000463315 UBR2Q8IWV8 1755 aa18.04■□□□□ 0.48
SEMA3D-203ENST00000463315 PNPLA7Q6ZV29 1317 aa18.03■□□□□ 0.48
SEMA3D-203ENST00000463315 LRP5O75197 1615 aa18.03■□□□□ 0.48
SEMA3D-203ENST00000463315 DCTN1Q14203 1278 aa18.03■□□□□ 0.48
SEMA3D-203ENST00000463315 CCDC146Q8IYE0 955 aa18.03■□□□□ 0.48
SEMA3D-203ENST00000463315 FMNL2Q96PY5 1086 aa18.03■□□□□ 0.48
SEMA3D-203ENST00000463315 SPON1Q9HCB6 807 aa18.03■□□□□ 0.48
SEMA3D-203ENST00000463315 MTFR1LQ9H019 292 aa18.02■□□□□ 0.48
SEMA3D-203ENST00000463315 COL5A3P25940 1745 aaPredicted RBP18.01■□□□□ 0.47
SEMA3D-203ENST00000463315 ZNF496Q96IT1 587 aaPredicted RBP18.01■□□□□ 0.47
SEMA3D-203ENST00000463315 HEG1Q9ULI3 1381 aa18.01■□□□□ 0.47
SEMA3D-203ENST00000463315 RTCBQ9Y3I0 505 aaKnown RBP18■□□□□ 0.47
SEMA3D-203ENST00000463315 TJP1Q07157 1748 aa17.99■□□□□ 0.47
SEMA3D-203ENST00000463315 RPS6KA4O75676 772 aa17.99■□□□□ 0.47
SEMA3D-203ENST00000463315 STARD3NLO95772 234 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms