RNA–Protein interactions for RNA: ENST00000462970.5

PSMD4-208, Transcript of proteasome 26S subunit, non-ATPase 4, humanhuman

TSL 5

Gene PSMD4, Length 900 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4-208ENST00000462970 ANP32CO43423 234 aa12.77□□□□□ -0.37
PSMD4-208ENST00000462970 NFATC2IPQ8NCF5 419 aa12.77□□□□□ -0.37
PSMD4-208ENST00000462970 C5P01031 1676 aa12.77□□□□□ -0.37
PSMD4-208ENST00000462970 TAF1LQ8IZX4 1826 aa12.76□□□□□ -0.37
PSMD4-208ENST00000462970 SLC15A2Q16348 729 aa12.76□□□□□ -0.37
PSMD4-208ENST00000462970 CNKSR2Q8WXI2 1034 aa12.76□□□□□ -0.37
PSMD4-208ENST00000462970 ATG3Q9NT62 314 aa12.76□□□□□ -0.37
PSMD4-208ENST00000462970 MAPK8IP3Q9UPT6 1336 aa12.76□□□□□ -0.37
PSMD4-208ENST00000462970 DLG5Q8TDM6 1919 aa12.76□□□□□ -0.37
PSMD4-208ENST00000462970 PTCD1O75127 700 aaKnown RBP12.75□□□□□ -0.37
PSMD4-208ENST00000462970 TEFQ10587 303 aa12.75□□□□□ -0.37
PSMD4-208ENST00000462970 ZNF827Q17R98 1081 aa12.75□□□□□ -0.37
PSMD4-208ENST00000462970 RTF1Q92541 710 aaKnown RBP12.75□□□□□ -0.37
PSMD4-208ENST00000462970 TFCP2L1Q9NZI6 479 aa12.75□□□□□ -0.37
PSMD4-208ENST00000462970 TUBGCP6Q96RT7 1819 aa12.74□□□□□ -0.37
PSMD4-208ENST00000462970 LRP5O75197 1615 aa12.74□□□□□ -0.37
PSMD4-208ENST00000462970 PAPPAQ13219 1627 aa12.74□□□□□ -0.37
PSMD4-208ENST00000462970 LOC102724428A0A0B4J2F2 783 aa12.74□□□□□ -0.37
PSMD4-208ENST00000462970 ATP6V1AP38606 617 aa12.74□□□□□ -0.37
PSMD4-208ENST00000462970 SIK1P57059 783 aa12.74□□□□□ -0.37
PSMD4-208ENST00000462970 CCDC146Q8IYE0 955 aa12.74□□□□□ -0.37
PSMD4-208ENST00000462970 PNNQ9H307 717 aaKnown RBP12.74□□□□□ -0.37
PSMD4-208ENST00000462970 SLC52A2Q9HAB3 445 aa12.74□□□□□ -0.37
PSMD4-208ENST00000462970 PDGFDQ9GZP0 370 aaPredicted RBP12.73□□□□□ -0.37
PSMD4-208ENST00000462970 NPM3O75607 178 aaKnown RBP12.72□□□□□ -0.37
PSMD4-208ENST00000462970 ZBTB7AO95365 584 aa12.72□□□□□ -0.37
PSMD4-208ENST00000462970 SLC39A6Q13433 755 aa12.72□□□□□ -0.37
PSMD4-208ENST00000462970 DCTN1Q14203 1278 aa12.72□□□□□ -0.37
PSMD4-208ENST00000462970 MCM10Q7L590 875 aa12.72□□□□□ -0.37
PSMD4-208ENST00000462970 IL17REQ8NFR9 667 aa12.72□□□□□ -0.37
PSMD4-208ENST00000462970 AK7Q96M32 723 aa12.72□□□□□ -0.37
PSMD4-208ENST00000462970 C4BP0C0L5 1744 aa12.71□□□□□ -0.37
PSMD4-208ENST00000462970 ADAMTS7Q9UKP4 1686 aa12.71□□□□□ -0.37
PSMD4-208ENST00000462970 ITPK1Q13572 414 aa12.71□□□□□ -0.37
PSMD4-208ENST00000462970 AKT1S1Q96B36 256 aa12.71□□□□□ -0.37
PSMD4-208ENST00000462970 CASZ1Q86V15 1759 aa12.71□□□□□ -0.38
PSMD4-208ENST00000462970 MRC1P22897 1456 aa12.71□□□□□ -0.38
PSMD4-208ENST00000462970 PHF14O94880 888 aa12.7□□□□□ -0.38
PSMD4-208ENST00000462970 NEUROD2Q15784 382 aa12.7□□□□□ -0.38
PSMD4-208ENST00000462970 NFE2L2Q16236 605 aa12.7□□□□□ -0.38
PSMD4-208ENST00000462970 TTC5Q8N0Z6 440 aa12.7□□□□□ -0.38
PSMD4-208ENST00000462970 LINC00116Q8NCU8 138 aa12.7□□□□□ -0.38
PSMD4-208ENST00000462970 PLEKHF1Q96S99 279 aa12.7□□□□□ -0.38
PSMD4-208ENST00000462970 ATF5Q9Y2D1 282 aaPredicted RBP12.7□□□□□ -0.38
PSMD4-208ENST00000462970 RRP7AQ9Y3A4 280 aaKnown RBP12.7□□□□□ -0.38
PSMD4-208ENST00000462970 SIPA1L3O60292 1781 aaPredicted RBP12.7□□□□□ -0.38
PSMD4-208ENST00000462970 QSER1Q2KHR3 1735 aa12.69□□□□□ -0.38
PSMD4-208ENST00000462970 HMGB2P26583 209 aaKnown RBP12.69□□□□□ -0.38
PSMD4-208ENST00000462970 CCDC184Q52MB2 194 aa12.69□□□□□ -0.38
PSMD4-208ENST00000462970 SMIM5Q71RC9 77 aa12.69□□□□□ -0.38
PSMD4-208ENST00000462970 MRS2Q9HD23 443 aa12.69□□□□□ -0.38
PSMD4-208ENST00000462970 PPP1R1BQ9UD71 204 aaPredicted RBP12.69□□□□□ -0.38
PSMD4-208ENST00000462970 ADAMTS8Q9UP79 889 aa12.69□□□□□ -0.38
PSMD4-208ENST00000462970 PNPLA7Q6ZV29 1317 aa12.68□□□□□ -0.38
PSMD4-208ENST00000462970 GNPATO15228 680 aa12.68□□□□□ -0.38
PSMD4-208ENST00000462970 SLC4A9Q96Q91 983 aa12.68□□□□□ -0.38
PSMD4-208ENST00000462970 THUMPD2Q9BTF0 503 aaKnown RBP12.68□□□□□ -0.38
PSMD4-208ENST00000462970 SPON1Q9HCB6 807 aa12.68□□□□□ -0.38
PSMD4-208ENST00000462970 COL5A3P25940 1745 aaPredicted RBP12.68□□□□□ -0.38
PSMD4-208ENST00000462970 UBR3Q6ZT12 1888 aa12.68□□□□□ -0.38
PSMD4-208ENST00000462970 BTBD11A6QL63 1104 aa12.67□□□□□ -0.38
PSMD4-208ENST00000462970 RIPK4P57078 832 aa12.67□□□□□ -0.38
PSMD4-208ENST00000462970 RUNDC1Q96C34 613 aa12.67□□□□□ -0.38
PSMD4-208ENST00000462970 TJP1Q07157 1748 aa12.67□□□□□ -0.38
PSMD4-208ENST00000462970 HTATSF1O43719 755 aaKnown RBP12.66□□□□□ -0.38
PSMD4-208ENST00000462970 MSL1Q68DK7 614 aa12.66□□□□□ -0.38
PSMD4-208ENST00000462970 COL23A1Q86Y22 540 aaPredicted RBP12.66□□□□□ -0.38
PSMD4-208ENST00000462970 DNAJC10Q8IXB1 793 aa12.66□□□□□ -0.38
PSMD4-208ENST00000462970 ZNF831Q5JPB2 1677 aa12.66□□□□□ -0.38
PSMD4-208ENST00000462970 CEMIPQ8WUJ3 1361 aa12.66□□□□□ -0.38
PSMD4-208ENST00000462970 UBR2Q8IWV8 1755 aa12.66□□□□□ -0.38
PSMD4-208ENST00000462970 MYH14Q7Z406 1995 aaKnown RBP12.65□□□□□ -0.38
PSMD4-208ENST00000462970 SENP3-EIF4A1A0A087X0R7 540 aa12.65□□□□□ -0.38
PSMD4-208ENST00000462970 KCNQ3O43525 872 aa12.65□□□□□ -0.38
PSMD4-208ENST00000462970 TMPOP42166 694 aaKnown RBP12.65□□□□□ -0.38
PSMD4-208ENST00000462970 MTFR1LQ9H019 292 aa12.65□□□□□ -0.38
PSMD4-208ENST00000462970 MIS18AQ9NYP9 233 aa12.65□□□□□ -0.38
PSMD4-208ENST00000462970 KCPQ6ZWJ8 1503 aa12.65□□□□□ -0.38
PSMD4-208ENST00000462970 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.64□□□□□ -0.39
PSMD4-208ENST00000462970 CRKLP46109 303 aaKnown RBP12.64□□□□□ -0.39
PSMD4-208ENST00000462970 LMOD3Q0VAK6 560 aa12.64□□□□□ -0.39
PSMD4-208ENST00000462970 ZNF790Q6PG37 636 aa12.64□□□□□ -0.39
PSMD4-208ENST00000462970 FLAD1Q8NFF5 587 aa12.64□□□□□ -0.39
PSMD4-208ENST00000462970 ZNF496Q96IT1 587 aaPredicted RBP12.64□□□□□ -0.39
PSMD4-208ENST00000462970 RTCBQ9Y3I0 505 aaKnown RBP12.64□□□□□ -0.39
PSMD4-208ENST00000462970 TAF7Q15545 349 aaPredicted RBP12.63□□□□□ -0.39
PSMD4-208ENST00000462970 AMIGO3Q86WK7 504 aa12.63□□□□□ -0.39
PSMD4-208ENST00000462970 KLHL34Q8N239 644 aa12.63□□□□□ -0.39
PSMD4-208ENST00000462970 FMNL2Q96PY5 1086 aa12.63□□□□□ -0.39
PSMD4-208ENST00000462970 LAS1LQ9Y4W2 734 aaKnown RBP12.63□□□□□ -0.39
PSMD4-208ENST00000462970 POLD1P28340 1107 aa12.62□□□□□ -0.39
PSMD4-208ENST00000462970 SLC16A10Q8TF71 515 aa12.62□□□□□ -0.39
PSMD4-208ENST00000462970 CCDC87Q9NVE4 849 aa12.62□□□□□ -0.39
PSMD4-208ENST00000462970 ZNF330Q9Y3S2 320 aaPredicted RBP12.62□□□□□ -0.39
PSMD4-208ENST00000462970 CNTNAP4Q9C0A0 1308 aa12.62□□□□□ -0.39
PSMD4-208ENST00000462970 HEG1Q9ULI3 1381 aa12.61□□□□□ -0.39
PSMD4-208ENST00000462970 APAF1O14727 1248 aa12.61□□□□□ -0.39
PSMD4-208ENST00000462970 CANXP27824 592 aaKnown RBP12.61□□□□□ -0.39
PSMD4-208ENST00000462970 SSFA2P28290 1259 aa12.61□□□□□ -0.39
PSMD4-208ENST00000462970 PTGER2P43116 358 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms