RNA–Protein interactions for RNA: ENST00000462616.1

PMPCA-205, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 2

Gene PMPCA, Length 3,341 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-205ENST00000462616 PNPLA6Q8IY17 1366 aa16.04■□□□□ 0.16
PMPCA-205ENST00000462616 PPLO60437 1756 aa16.04■□□□□ 0.16
PMPCA-205ENST00000462616 HCLS1P14317 486 aaPredicted RBP16.04■□□□□ 0.16
PMPCA-205ENST00000462616 RIMS1Q86UR5 1692 aaKnown RBP16.04■□□□□ 0.16
PMPCA-205ENST00000462616 PIK3R4Q99570 1358 aa16.04■□□□□ 0.16
PMPCA-205ENST00000462616 G2E3Q7L622 706 aa16.03■□□□□ 0.16
PMPCA-205ENST00000462616 CBX1P83916 185 aa16.03■□□□□ 0.16
PMPCA-205ENST00000462616 BCL11BQ9C0K0 894 aaPredicted RBP16.03■□□□□ 0.16
PMPCA-205ENST00000462616 CHMP3Q9Y3E7 222 aa16.03■□□□□ 0.16
PMPCA-205ENST00000462616 YTHDC2Q9H6S0 1430 aaKnown RBP16.02■□□□□ 0.16
PMPCA-205ENST00000462616 BRD1O95696 1058 aa16.02■□□□□ 0.16
PMPCA-205ENST00000462616 IL1RAPL2Q9NP60 686 aa16.02■□□□□ 0.16
PMPCA-205ENST00000462616 FIBPO43427 364 aa16.02■□□□□ 0.15
PMPCA-205ENST00000462616 MCM5P33992 734 aa16.02■□□□□ 0.15
PMPCA-205ENST00000462616 ZNF142P52746 1687 aaPredicted RBP16.02■□□□□ 0.15
PMPCA-205ENST00000462616 USP32Q8NFA0 1604 aa16.02■□□□□ 0.15
PMPCA-205ENST00000462616 RTL1A6NKG5 1358 aa16.01■□□□□ 0.15
PMPCA-205ENST00000462616 ESYT1Q9BSJ8 1104 aa16.01■□□□□ 0.15
PMPCA-205ENST00000462616 ADCY5O95622 1261 aa16.01■□□□□ 0.15
PMPCA-205ENST00000462616 SPC24Q8NBT2 197 aa16.01■□□□□ 0.15
PMPCA-205ENST00000462616 CNPY2Q9Y2B0 182 aa16.01■□□□□ 0.15
PMPCA-205ENST00000462616 RIMS2Q9UQ26 1411 aa16.01■□□□□ 0.15
PMPCA-205ENST00000462616 SLC52A1Q9NWF4 448 aa16■□□□□ 0.15
PMPCA-205ENST00000462616 PHF14O94880 888 aa15.99■□□□□ 0.15
PMPCA-205ENST00000462616 NOLC1Q14978 699 aaKnown RBP eCLIP15.99■□□□□ 0.15
PMPCA-205ENST00000462616 CD163L1Q9NR16 1453 aa15.99■□□□□ 0.15
PMPCA-205ENST00000462616 MX1P20591 662 aa15.99■□□□□ 0.15
PMPCA-205ENST00000462616 UNC5CLQ8IV45 518 aa15.99■□□□□ 0.15
PMPCA-205ENST00000462616 PRDM4Q9UKN5 801 aa15.99■□□□□ 0.15
PMPCA-205ENST00000462616 UBR1Q8IWV7 1749 aa15.99■□□□□ 0.15
PMPCA-205ENST00000462616 FOXO3O43524 673 aa15.98■□□□□ 0.15
PMPCA-205ENST00000462616 NUTM1Q86Y26 1132 aa15.98■□□□□ 0.15
PMPCA-205ENST00000462616 LRRCC1Q9C099 1032 aa15.98■□□□□ 0.15
PMPCA-205ENST00000462616 FKBP5Q13451 457 aaPredicted RBP15.98■□□□□ 0.15
PMPCA-205ENST00000462616 TXNDC2Q86VQ3 553 aa15.98■□□□□ 0.15
PMPCA-205ENST00000462616 GIMAP6Q6P9H5 292 aa15.97■□□□□ 0.15
PMPCA-205ENST00000462616 DDX54Q8TDD1 881 aaKnown RBP15.97■□□□□ 0.15
PMPCA-205ENST00000462616 TSPYL4Q9UJ04 414 aa15.97■□□□□ 0.15
PMPCA-205ENST00000462616 ZFYVE9O95405 1425 aa15.97■□□□□ 0.15
PMPCA-205ENST00000462616 ATP10DQ9P241 1426 aa15.97■□□□□ 0.15
PMPCA-205ENST00000462616 NEXMIFQ5QGS0 1516 aa15.97■□□□□ 0.15
PMPCA-205ENST00000462616 MYO5BQ9ULV0 1848 aa15.97■□□□□ 0.15
PMPCA-205ENST00000462616 SPDYE4A6NLX3 237 aa15.97■□□□□ 0.15
PMPCA-205ENST00000462616 MTERF4Q7Z6M4 381 aaKnown RBP15.97■□□□□ 0.15
PMPCA-205ENST00000462616 GNAI2P04899 355 aa15.97■□□□□ 0.15
PMPCA-205ENST00000462616 MCM2P49736 904 aa15.97■□□□□ 0.15
PMPCA-205ENST00000462616 ARHGEF28Q8N1W1 1705 aaKnown RBP15.97■□□□□ 0.15
PMPCA-205ENST00000462616 PNMA6EA0A0J9YXQ4 647 aa15.96■□□□□ 0.15
PMPCA-205ENST00000462616 CPA1P15085 419 aa15.96■□□□□ 0.15
PMPCA-205ENST00000462616 CHMLP26374 656 aa15.96■□□□□ 0.15
PMPCA-205ENST00000462616 SRCIN1Q9C0H9 1055 aa15.96■□□□□ 0.15
PMPCA-205ENST00000462616 HAP1P54257 671 aaPredicted RBP15.96■□□□□ 0.15
PMPCA-205ENST00000462616 IGSF3O75054 1194 aa15.96■□□□□ 0.14
PMPCA-205ENST00000462616 RTF1Q92541 710 aaKnown RBP15.96■□□□□ 0.14
PMPCA-205ENST00000462616 WDR33Q9C0J8 1336 aaKnown RBP15.96■□□□□ 0.14
PMPCA-205ENST00000462616 MYRIPQ8NFW9 859 aa15.95■□□□□ 0.14
PMPCA-205ENST00000462616 PPP4R3BQ5MIZ7 849 aa15.95■□□□□ 0.14
PMPCA-205ENST00000462616 IL25Q9H293 177 aa15.95■□□□□ 0.14
PMPCA-205ENST00000462616 STK31Q9BXU1 1019 aa15.94■□□□□ 0.14
PMPCA-205ENST00000462616 EIF4A2Q14240 407 aaKnown RBP15.94■□□□□ 0.14
PMPCA-205ENST00000462616 HSP90AB2PQ58FF8 381 aa15.94■□□□□ 0.14
PMPCA-205ENST00000462616 CCDC94Q9BW85 323 aaPredicted RBP15.94■□□□□ 0.14
PMPCA-205ENST00000462616 TNRQ92752 1358 aa15.94■□□□□ 0.14
PMPCA-205ENST00000462616 CHL1O00533 1208 aa15.94■□□□□ 0.14
PMPCA-205ENST00000462616 MLECQ14165 292 aa15.94■□□□□ 0.14
PMPCA-205ENST00000462616 ESF1Q9H501 851 aaKnown RBP15.94■□□□□ 0.14
PMPCA-205ENST00000462616 KIF3AQ9Y496 699 aa15.93■□□□□ 0.14
PMPCA-205ENST00000462616 CUL4AQ13619 759 aa15.93■□□□□ 0.14
PMPCA-205ENST00000462616 CCDC183Q5T5S1 534 aa15.93■□□□□ 0.14
PMPCA-205ENST00000462616 PIBF1Q8WXW3 757 aa15.93■□□□□ 0.14
PMPCA-205ENST00000462616 KNDC1Q76NI1 1749 aa15.93■□□□□ 0.14
PMPCA-205ENST00000462616 NUDT16Q96DE0 195 aaKnown RBP15.93■□□□□ 0.14
PMPCA-205ENST00000462616 LRRFIP2Q9Y608 721 aaKnown RBP15.93■□□□□ 0.14
PMPCA-205ENST00000462616 A2ML1A8K2U0 1454 aa15.92■□□□□ 0.14
PMPCA-205ENST00000462616 PTPRCP08575 1304 aa15.92■□□□□ 0.14
PMPCA-205ENST00000462616 VPS37CA5D8V6 355 aaPredicted RBP15.92■□□□□ 0.14
PMPCA-205ENST00000462616 SPG7Q9UQ90 795 aa15.92■□□□□ 0.14
PMPCA-205ENST00000462616 SMC3Q9UQE7 1217 aa15.92■□□□□ 0.14
PMPCA-205ENST00000462616 PTPRMP28827 1452 aa15.91■□□□□ 0.14
PMPCA-205ENST00000462616 SMAP1Q8IYB5 467 aaPredicted RBP15.91■□□□□ 0.14
PMPCA-205ENST00000462616 INTS4Q96HW7 963 aaKnown RBP15.91■□□□□ 0.14
PMPCA-205ENST00000462616 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.91■□□□□ 0.14
PMPCA-205ENST00000462616 CCT4P50991 539 aaKnown RBP15.91■□□□□ 0.14
PMPCA-205ENST00000462616 HMGN5P82970 282 aaKnown RBP15.91■□□□□ 0.14
PMPCA-205ENST00000462616 CWC27Q6UX04 472 aaKnown RBP15.91■□□□□ 0.14
PMPCA-205ENST00000462616 ZNF710Q8N1W2 664 aa15.91■□□□□ 0.14
PMPCA-205ENST00000462616 MAP2P11137 1827 aaKnown RBP15.91■□□□□ 0.14
PMPCA-205ENST00000462616 SURF6O75683 361 aaKnown RBP15.9■□□□□ 0.14
PMPCA-205ENST00000462616 CHAF1AQ13111 956 aaPredicted RBP15.9■□□□□ 0.14
PMPCA-205ENST00000462616 CAMK4Q16566 473 aa15.9■□□□□ 0.14
PMPCA-205ENST00000462616 DRC7Q8IY82 874 aa15.9■□□□□ 0.14
PMPCA-205ENST00000462616 SLIT1O75093 1534 aa15.9■□□□□ 0.14
PMPCA-205ENST00000462616 FAM184AQ8NB25 1140 aa15.9■□□□□ 0.14
PMPCA-205ENST00000462616 WASLO00401 505 aaPredicted RBP15.89■□□□□ 0.13
PMPCA-205ENST00000462616 SYT1P21579 422 aa15.89■□□□□ 0.13
PMPCA-205ENST00000462616 CCDC83Q8IWF9 413 aa15.89■□□□□ 0.13
PMPCA-205ENST00000462616 STX6O43752 255 aa15.89■□□□□ 0.13
PMPCA-205ENST00000462616 DNM1Q05193 864 aaKnown RBP15.89■□□□□ 0.13
PMPCA-205ENST00000462616 FERMT3Q86UX7 667 aa15.89■□□□□ 0.13
PMPCA-205ENST00000462616 OSBPL3Q9H4L5 887 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms