RNA–Protein interactions for RNA: ENST00000462523.5

XPA-202, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

TSL 5

Gene XPA, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-202ENST00000462523 RGPD4Q7Z3J3 1758 aa25.27■■□□□ 1.64
XPA-202ENST00000462523 APBA3O96018 575 aa25.27■■□□□ 1.64
XPA-202ENST00000462523 LMOD3Q0VAK6 560 aa25.27■■□□□ 1.64
XPA-202ENST00000462523 LY75O60449 1722 aa25.26■■□□□ 1.63
XPA-202ENST00000462523 CCDC125Q86Z20 511 aa25.26■■□□□ 1.63
XPA-202ENST00000462523 ASAP1Q9ULH1 1129 aa25.26■■□□□ 1.63
XPA-202ENST00000462523 TEFQ10587 303 aa25.25■■□□□ 1.63
XPA-202ENST00000462523 ATG3Q9NT62 314 aa25.24■■□□□ 1.63
XPA-202ENST00000462523 SALL2Q9Y467 1007 aaPredicted RBP25.24■■□□□ 1.63
XPA-202ENST00000462523 CCDC27Q2M243 656 aa25.23■■□□□ 1.63
XPA-202ENST00000462523 NCBP3Q53F19 620 aaKnown RBP25.23■■□□□ 1.63
XPA-202ENST00000462523 DEFB132Q7Z7B7 95 aa25.23■■□□□ 1.63
XPA-202ENST00000462523 UBR2Q8IWV8 1755 aa25.23■■□□□ 1.63
XPA-202ENST00000462523 KDM3BQ7LBC6 1761 aa25.23■■□□□ 1.63
XPA-202ENST00000462523 PLSCR1O15162 318 aa25.22■■□□□ 1.63
XPA-202ENST00000462523 SLC39A6Q13433 755 aa25.22■■□□□ 1.63
XPA-202ENST00000462523 WWC1Q8IX03 1113 aa25.22■■□□□ 1.63
XPA-202ENST00000462523 EN1Q05925 392 aaPredicted RBP25.21■■□□□ 1.63
XPA-202ENST00000462523 SF3B2Q13435 895 aaKnown RBP25.21■■□□□ 1.63
XPA-202ENST00000462523 PALLDQ8WX93 1383 aa25.21■■□□□ 1.63
XPA-202ENST00000462523 KCPQ6ZWJ8 1503 aa25.2■■□□□ 1.63
XPA-202ENST00000462523 RREB1Q92766 1687 aa25.2■■□□□ 1.62
XPA-202ENST00000462523 SOCS7O14512 581 aa25.19■■□□□ 1.62
XPA-202ENST00000462523 TAF7Q15545 349 aaPredicted RBP25.19■■□□□ 1.62
XPA-202ENST00000462523 PROM2Q8N271 834 aa25.19■■□□□ 1.62
XPA-202ENST00000462523 CAMKK2Q96RR4 588 aa25.19■■□□□ 1.62
XPA-202ENST00000462523 MIS18AQ9NYP9 233 aa25.19■■□□□ 1.62
XPA-202ENST00000462523 BAG6P46379 1132 aa25.18■■□□□ 1.62
XPA-202ENST00000462523 ZNF521Q96K83 1311 aa25.18■■□□□ 1.62
XPA-202ENST00000462523 BTBD11A6QL63 1104 aa25.18■■□□□ 1.62
XPA-202ENST00000462523 KCNQ3O43525 872 aa25.18■■□□□ 1.62
XPA-202ENST00000462523 EZH2Q15910 746 aaKnown RBP25.18■■□□□ 1.62
XPA-202ENST00000462523 ZNF790Q6PG37 636 aa25.16■■□□□ 1.62
XPA-202ENST00000462523 NGEFQ8N5V2 710 aa25.16■■□□□ 1.62
XPA-202ENST00000462523 SMARCC1Q92922 1105 aaPredicted RBP25.15■■□□□ 1.62
XPA-202ENST00000462523 SLC4A9Q96Q91 983 aa25.15■■□□□ 1.62
XPA-202ENST00000462523 NUP188Q5SRE5 1749 aa25.15■■□□□ 1.62
XPA-202ENST00000462523 ZNF831Q5JPB2 1677 aa25.15■■□□□ 1.62
XPA-202ENST00000462523 KCNQ4P56696 695 aa25.14■■□□□ 1.62
XPA-202ENST00000462523 TJP1Q07157 1748 aa25.14■■□□□ 1.61
XPA-202ENST00000462523 ZNF853P0CG23 659 aa25.14■■□□□ 1.61
XPA-202ENST00000462523 TXNRD1Q16881 649 aa25.14■■□□□ 1.61
XPA-202ENST00000462523 LRRC4BQ9NT99 713 aa25.14■■□□□ 1.61
XPA-202ENST00000462523 TAF1LQ8IZX4 1826 aa25.13■■□□□ 1.61
XPA-202ENST00000462523 CHL1O00533 1208 aa25.13■■□□□ 1.61
XPA-202ENST00000462523 PTCD1O75127 700 aaKnown RBP25.13■■□□□ 1.61
XPA-202ENST00000462523 CICQ96RK0 1608 aaPredicted RBP25.13■■□□□ 1.61
XPA-202ENST00000462523 LOC102724428A0A0B4J2F2 783 aa25.12■■□□□ 1.61
XPA-202ENST00000462523 SIK1P57059 783 aa25.12■■□□□ 1.61
XPA-202ENST00000462523 ZNF496Q96IT1 587 aaPredicted RBP25.11■■□□□ 1.61
XPA-202ENST00000462523 CFAP44Q96MT7 982 aa25.11■■□□□ 1.61
XPA-202ENST00000462523 C5P01031 1676 aa25.1■■□□□ 1.61
XPA-202ENST00000462523 HNRNPUQ00839 825 aaKnown RBP eCLIP25.1■■□□□ 1.61
XPA-202ENST00000462523 RBM42Q9BTD8 480 aaKnown RBP25.1■■□□□ 1.61
XPA-202ENST00000462523 SPINK5Q9NQ38 1064 aaPredicted RBP25.1■■□□□ 1.61
XPA-202ENST00000462523 IFT57Q9NWB7 429 aa25.1■■□□□ 1.61
XPA-202ENST00000462523 TSPYL4Q9UJ04 414 aa25.1■■□□□ 1.61
XPA-202ENST00000462523 LAS1LQ9Y4W2 734 aaKnown RBP25.1■■□□□ 1.61
XPA-202ENST00000462523 CALD1Q05682 793 aaKnown RBP25.1■■□□□ 1.61
XPA-202ENST00000462523 WDR63Q8IWG1 891 aa25.1■■□□□ 1.61
XPA-202ENST00000462523 TTC5Q8N0Z6 440 aa25.1■■□□□ 1.61
XPA-202ENST00000462523 BABAM1Q9NWV8 329 aa25.1■■□□□ 1.61
XPA-202ENST00000462523 CCNL1Q9UK58 526 aaPredicted RBP25.1■■□□□ 1.61
XPA-202ENST00000462523 COL5A3P25940 1745 aaPredicted RBP25.09■■□□□ 1.61
XPA-202ENST00000462523 ITPK1Q13572 414 aa25.09■■□□□ 1.61
XPA-202ENST00000462523 MBIPQ9NS73 344 aa25.09■■□□□ 1.61
XPA-202ENST00000462523 IL16Q14005 1332 aa25.08■■□□□ 1.61
XPA-202ENST00000462523 SLC27A3Q5K4L6 730 aa25.08■■□□□ 1.61
XPA-202ENST00000462523 HEG1Q9ULI3 1381 aa25.07■■□□□ 1.6
XPA-202ENST00000462523 ATP6V1AP38606 617 aa25.06■■□□□ 1.6
XPA-202ENST00000462523 EIF4A1P60842 406 aaKnown RBP25.06■■□□□ 1.6
XPA-202ENST00000462523 GNAI1P63096 354 aa25.06■■□□□ 1.6
XPA-202ENST00000462523 FMNL2Q96PY5 1086 aa25.05■■□□□ 1.6
XPA-202ENST00000462523 TSR2Q969E8 191 aaKnown RBP25.05■■□□□ 1.6
XPA-202ENST00000462523 PRAMEF22A3QJZ6 481 aa25.04■■□□□ 1.6
XPA-202ENST00000462523 KRT24Q2M2I5 525 aa25.04■■□□□ 1.6
XPA-202ENST00000462523 C4BP0C0L5 1744 aa25.03■■□□□ 1.6
XPA-202ENST00000462523 VSIG10Q8N0Z9 540 aa25.03■■□□□ 1.6
XPA-202ENST00000462523 LINC00116Q8NCU8 138 aa25.03■■□□□ 1.6
XPA-202ENST00000462523 DNAJC10Q8IXB1 793 aa25.02■■□□□ 1.6
XPA-202ENST00000462523 LAMB4A4D0S4 1761 aa25.02■■□□□ 1.6
XPA-202ENST00000462523 CDCA7LQ96GN5 454 aa25.01■■□□□ 1.59
XPA-202ENST00000462523 ANO8Q9HCE9 1232 aaPredicted RBP25.01■■□□□ 1.59
XPA-202ENST00000462523 FANCIQ9NVI1 1328 aa25.01■■□□□ 1.59
XPA-202ENST00000462523 MYH14Q7Z406 1995 aaKnown RBP25.01■■□□□ 1.59
XPA-202ENST00000462523 GOLGA2Q08379 1002 aa25.01■■□□□ 1.59
XPA-202ENST00000462523 GIGYF1O75420 1035 aaPredicted RBP25■■□□□ 1.59
XPA-202ENST00000462523 TUBGCP6Q96RT7 1819 aa24.99■■□□□ 1.59
XPA-202ENST00000462523 ZBED9Q6R2W3 1325 aa24.99■■□□□ 1.59
XPA-202ENST00000462523 SNRPA1P09661 255 aaKnown RBP24.98■■□□□ 1.59
XPA-202ENST00000462523 ZNF827Q17R98 1081 aa24.98■■□□□ 1.59
XPA-202ENST00000462523 CYP19A1P11511 503 aaPredicted RBP24.97■■□□□ 1.59
XPA-202ENST00000462523 SLFN5Q08AF3 891 aa24.97■■□□□ 1.59
XPA-202ENST00000462523 USP16Q9Y5T5 823 aa24.97■■□□□ 1.59
XPA-202ENST00000462523 AKT1S1Q96B36 256 aa24.97■■□□□ 1.59
XPA-202ENST00000462523 UBR3Q6ZT12 1888 aa24.96■■□□□ 1.59
XPA-202ENST00000462523 C8orf58Q8NAV2 365 aa24.96■■□□□ 1.59
XPA-202ENST00000462523 E9PSI1 815 aa24.95■■□□□ 1.58
XPA-202ENST00000462523 AMIGO3Q86WK7 504 aa24.95■■□□□ 1.58
XPA-202ENST00000462523 TRMT2AQ8IZ69 625 aaKnown RBP24.95■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms