RNA–Protein interactions for RNA: ENST00000461426.1

SIGMAR1-204, Transcript of sigma non-opioid intracellular receptor 1, humanhuman

TSL 1 (best)

Gene SIGMAR1, Length 939 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIGMAR1-204ENST00000461426 IL17REQ8NFR9 667 aa35.29■■■■□ 3.24
SIGMAR1-204ENST00000461426 ZNF827Q17R98 1081 aa35.27■■■■□ 3.24
SIGMAR1-204ENST00000461426 SCN11AQ9UI33 1791 aa35.27■■■■□ 3.24
SIGMAR1-204ENST00000461426 PAPPAQ13219 1627 aa35.26■■■■□ 3.24
SIGMAR1-204ENST00000461426 HTATSF1O43719 755 aaKnown RBP35.26■■■■□ 3.24
SIGMAR1-204ENST00000461426 WDR43Q15061 677 aaKnown RBP eCLIP35.26■■■■□ 3.24
SIGMAR1-204ENST00000461426 ATP6V1AP38606 617 aa35.24■■■■□ 3.23
SIGMAR1-204ENST00000461426 RTF1Q92541 710 aaKnown RBP35.24■■■■□ 3.23
SIGMAR1-204ENST00000461426 MAPK8IP3Q9UPT6 1336 aa35.24■■■■□ 3.23
SIGMAR1-204ENST00000461426 TEFQ10587 303 aa35.23■■■■□ 3.23
SIGMAR1-204ENST00000461426 TFCP2L1Q9NZI6 479 aa35.23■■■■□ 3.23
SIGMAR1-204ENST00000461426 ADAMTS7Q9UKP4 1686 aa35.22■■■■□ 3.23
SIGMAR1-204ENST00000461426 RBM42Q9BTD8 480 aaKnown RBP35.22■■■■□ 3.23
SIGMAR1-204ENST00000461426 MRC1P22897 1456 aa35.22■■■■□ 3.23
SIGMAR1-204ENST00000461426 SRCAPQ6ZRS2 3230 aa35.21■■■■□ 3.23
SIGMAR1-204ENST00000461426 CEMIPQ8WUJ3 1361 aa35.2■■■■□ 3.23
SIGMAR1-204ENST00000461426 NFE2L2Q16236 605 aa35.19■■■■□ 3.22
SIGMAR1-204ENST00000461426 PTCD1O75127 700 aaKnown RBP35.18■■■■□ 3.22
SIGMAR1-204ENST00000461426 ITPK1Q13572 414 aa35.18■■■■□ 3.22
SIGMAR1-204ENST00000461426 ADAMTS8Q9UP79 889 aa35.18■■■■□ 3.22
SIGMAR1-204ENST00000461426 SLC4A9Q96Q91 983 aa35.17■■■■□ 3.22
SIGMAR1-204ENST00000461426 PDGFDQ9GZP0 370 aaPredicted RBP35.17■■■■□ 3.22
SIGMAR1-204ENST00000461426 SLC39A6Q13433 755 aa35.15■■■■□ 3.22
SIGMAR1-204ENST00000461426 LINC00116Q8NCU8 138 aa35.15■■■■□ 3.22
SIGMAR1-204ENST00000461426 MCM10Q7L590 875 aa35.14■■■■□ 3.22
SIGMAR1-204ENST00000461426 SPON1Q9HCB6 807 aa35.14■■■■□ 3.22
SIGMAR1-204ENST00000461426 AK7Q96M32 723 aa35.13■■■■□ 3.21
SIGMAR1-204ENST00000461426 PNPLA7Q6ZV29 1317 aa35.12■■■■□ 3.21
SIGMAR1-204ENST00000461426 FLAD1Q8NFF5 587 aa35.12■■■■□ 3.21
SIGMAR1-204ENST00000461426 RUNDC1Q96C34 613 aa35.12■■■■□ 3.21
SIGMAR1-204ENST00000461426 TTC5Q8N0Z6 440 aa35.11■■■■□ 3.21
SIGMAR1-204ENST00000461426 SLC16A10Q8TF71 515 aa35.11■■■■□ 3.21
SIGMAR1-204ENST00000461426 C5P01031 1676 aa35.11■■■■□ 3.21
SIGMAR1-204ENST00000461426 DCTN1Q14203 1278 aa35.1■■■■□ 3.21
SIGMAR1-204ENST00000461426 ZBTB7AO95365 584 aa35.09■■■■□ 3.21
SIGMAR1-204ENST00000461426 RC3H1Q5TC82 1133 aaKnown RBP35.09■■■■□ 3.21
SIGMAR1-204ENST00000461426 VIRMAQ69YN4 1812 aaKnown RBP35.09■■■■□ 3.21
SIGMAR1-204ENST00000461426 ZNF831Q5JPB2 1677 aa35.08■■■■□ 3.21
SIGMAR1-204ENST00000461426 BTBD11A6QL63 1104 aa35.08■■■■□ 3.21
SIGMAR1-204ENST00000461426 ZNF790Q6PG37 636 aa35.08■■■■□ 3.21
SIGMAR1-204ENST00000461426 CCDC146Q8IYE0 955 aa35.08■■■■□ 3.21
SIGMAR1-204ENST00000461426 MTFR1LQ9H019 292 aa35.08■■■■□ 3.21
SIGMAR1-204ENST00000461426 TAF1LQ8IZX4 1826 aa35.08■■■■□ 3.21
SIGMAR1-204ENST00000461426 CASZ1Q86V15 1759 aa35.08■■■■□ 3.21
SIGMAR1-204ENST00000461426 TMPOP42166 694 aaKnown RBP35.07■■■■□ 3.2
SIGMAR1-204ENST00000461426 RIPK4P57078 832 aa35.07■■■■□ 3.2
SIGMAR1-204ENST00000461426 CCDC184Q52MB2 194 aa35.07■■■■□ 3.2
SIGMAR1-204ENST00000461426 VSIG10Q8N0Z9 540 aa35.07■■■■□ 3.2
SIGMAR1-204ENST00000461426 C4BP0C0L5 1744 aa35.06■■■■□ 3.2
SIGMAR1-204ENST00000461426 COL23A1Q86Y22 540 aaPredicted RBP35.06■■■■□ 3.2
SIGMAR1-204ENST00000461426 TAF7Q15545 349 aaPredicted RBP35.05■■■■□ 3.2
SIGMAR1-204ENST00000461426 MRS2Q9HD23 443 aa35.04■■■■□ 3.2
SIGMAR1-204ENST00000461426 CNTNAP4Q9C0A0 1308 aa35.04■■■■□ 3.2
SIGMAR1-204ENST00000461426 QSER1Q2KHR3 1735 aa35.03■■■■□ 3.2
SIGMAR1-204ENST00000461426 LRP5O75197 1615 aa35.03■■■■□ 3.2
SIGMAR1-204ENST00000461426 GNPATO15228 680 aa35.03■■■■□ 3.2
SIGMAR1-204ENST00000461426 MSH5O43196 834 aa35.03■■■■□ 3.2
SIGMAR1-204ENST00000461426 SSFA2P28290 1259 aa35.03■■■■□ 3.2
SIGMAR1-204ENST00000461426 LMOD3Q0VAK6 560 aa35.03■■■■□ 3.2
SIGMAR1-204ENST00000461426 ATF5Q9Y2D1 282 aaPredicted RBP35.03■■■■□ 3.2
SIGMAR1-204ENST00000461426 ZNF496Q96IT1 587 aaPredicted RBP35.01■■■■□ 3.2
SIGMAR1-204ENST00000461426 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP35■■■■□ 3.19
SIGMAR1-204ENST00000461426 DNAJC10Q8IXB1 793 aa35■■■■□ 3.19
SIGMAR1-204ENST00000461426 PNISRQ8TF01 805 aaKnown RBP35■■■■□ 3.19
SIGMAR1-204ENST00000461426 FMNL2Q96PY5 1086 aa35■■■■□ 3.19
SIGMAR1-204ENST00000461426 RTCBQ9Y3I0 505 aaKnown RBP35■■■■□ 3.19
SIGMAR1-204ENST00000461426 KCPQ6ZWJ8 1503 aa35■■■■□ 3.19
SIGMAR1-204ENST00000461426 SIPA1L3O60292 1781 aaPredicted RBP34.98■■■■□ 3.19
SIGMAR1-204ENST00000461426 CRKLP46109 303 aaKnown RBP34.98■■■■□ 3.19
SIGMAR1-204ENST00000461426 AMIGO3Q86WK7 504 aa34.98■■■■□ 3.19
SIGMAR1-204ENST00000461426 TEX13AQ9BXU3 409 aaPredicted RBP34.98■■■■□ 3.19
SIGMAR1-204ENST00000461426 RPS6KA4O75676 772 aa34.97■■■■□ 3.19
SIGMAR1-204ENST00000461426 PHF14O94880 888 aa34.97■■■■□ 3.19
SIGMAR1-204ENST00000461426 RRP7AQ9Y3A4 280 aaKnown RBP34.97■■■■□ 3.19
SIGMAR1-204ENST00000461426 KCNQ3O43525 872 aa34.96■■■■□ 3.19
SIGMAR1-204ENST00000461426 PTGER2P43116 358 aa34.96■■■■□ 3.19
SIGMAR1-204ENST00000461426 NEUROD2Q15784 382 aa34.96■■■■□ 3.19
SIGMAR1-204ENST00000461426 TRAPPC3LQ5T215 181 aa34.96■■■■□ 3.19
SIGMAR1-204ENST00000461426 THUMPD2Q9BTF0 503 aaKnown RBP34.96■■■■□ 3.19
SIGMAR1-204ENST00000461426 DLG5Q8TDM6 1919 aa34.95■■■■□ 3.19
SIGMAR1-204ENST00000461426 STARD3NLO95772 234 aa34.95■■■■□ 3.19
SIGMAR1-204ENST00000461426 CYP19A1P11511 503 aaPredicted RBP34.95■■■■□ 3.19
SIGMAR1-204ENST00000461426 ADRA2BP18089 450 aa34.95■■■■□ 3.19
SIGMAR1-204ENST00000461426 HEG1Q9ULI3 1381 aa34.95■■■■□ 3.19
SIGMAR1-204ENST00000461426 PPP1R1BQ9UD71 204 aaPredicted RBP34.94■■■■□ 3.18
SIGMAR1-204ENST00000461426 TUBGCP6Q96RT7 1819 aa34.94■■■■□ 3.18
SIGMAR1-204ENST00000461426 INTS5Q6P9B9 1019 aaKnown RBP34.93■■■■□ 3.18
SIGMAR1-204ENST00000461426 SMIM5Q71RC9 77 aa34.93■■■■□ 3.18
SIGMAR1-204ENST00000461426 SGIP1Q9BQI5 828 aa34.93■■■■□ 3.18
SIGMAR1-204ENST00000461426 CCDC87Q9NVE4 849 aa34.93■■■■□ 3.18
SIGMAR1-204ENST00000461426 CICQ96RK0 1608 aaPredicted RBP34.92■■■■□ 3.18
SIGMAR1-204ENST00000461426 MIS18AQ9NYP9 233 aa34.92■■■■□ 3.18
SIGMAR1-204ENST00000461426 UBR2Q8IWV8 1755 aa34.91■■■■□ 3.18
SIGMAR1-204ENST00000461426 COL5A3P25940 1745 aaPredicted RBP34.91■■■■□ 3.18
SIGMAR1-204ENST00000461426 UBR3Q6ZT12 1888 aa34.9■■■■□ 3.18
SIGMAR1-204ENST00000461426 APAF1O14727 1248 aa34.9■■■■□ 3.18
SIGMAR1-204ENST00000461426 POLD1P28340 1107 aa34.9■■■■□ 3.18
SIGMAR1-204ENST00000461426 TRIM35Q9UPQ4 493 aa34.9■■■■□ 3.18
SIGMAR1-204ENST00000461426 BABAM1Q9NWV8 329 aa34.89■■■■□ 3.18
SIGMAR1-204ENST00000461426 TJP1Q07157 1748 aa34.89■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 146.9 ms