RNA–Protein interactions for RNA: ENST00000460826.1

HDLBP-229, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 442 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-229ENST00000460826 NFATC2IPQ8NCF5 419 aa18.52■□□□□ 0.56
HDLBP-229ENST00000460826 RRP7AQ9Y3A4 280 aaKnown RBP18.52■□□□□ 0.56
HDLBP-229ENST00000460826 CEMIPQ8WUJ3 1361 aa18.52■□□□□ 0.55
HDLBP-229ENST00000460826 TMPOP42166 694 aaKnown RBP18.51■□□□□ 0.55
HDLBP-229ENST00000460826 FAM9BQ8IZU0 186 aa18.51■□□□□ 0.55
HDLBP-229ENST00000460826 SLC52A2Q9HAB3 445 aa18.51■□□□□ 0.55
HDLBP-229ENST00000460826 PAPPAQ13219 1627 aa18.51■□□□□ 0.55
HDLBP-229ENST00000460826 ASAP1Q9ULH1 1129 aa18.5■□□□□ 0.55
HDLBP-229ENST00000460826 RIPK4P57078 832 aa18.49■□□□□ 0.55
HDLBP-229ENST00000460826 TXNRD1Q16881 649 aa18.49■□□□□ 0.55
HDLBP-229ENST00000460826 ATG3Q9NT62 314 aa18.49■□□□□ 0.55
HDLBP-229ENST00000460826 PALLDQ8WX93 1383 aa18.49■□□□□ 0.55
HDLBP-229ENST00000460826 SENP3-EIF4A1A0A087X0R7 540 aa18.48■□□□□ 0.55
HDLBP-229ENST00000460826 APAF1O14727 1248 aa18.48■□□□□ 0.55
HDLBP-229ENST00000460826 HTATSF1O43719 755 aaKnown RBP18.48■□□□□ 0.55
HDLBP-229ENST00000460826 NEUROD2Q15784 382 aa18.48■□□□□ 0.55
HDLBP-229ENST00000460826 RTF1Q92541 710 aaKnown RBP18.48■□□□□ 0.55
HDLBP-229ENST00000460826 THUMPD2Q9BTF0 503 aaKnown RBP18.48■□□□□ 0.55
HDLBP-229ENST00000460826 TAF1LQ8IZX4 1826 aa18.48■□□□□ 0.55
HDLBP-229ENST00000460826 KCNQ4P56696 695 aa18.47■□□□□ 0.55
HDLBP-229ENST00000460826 UBR2Q8IWV8 1755 aa18.46■□□□□ 0.55
HDLBP-229ENST00000460826 TEFQ10587 303 aa18.46■□□□□ 0.55
HDLBP-229ENST00000460826 SMARCC1Q92922 1105 aaPredicted RBP18.46■□□□□ 0.55
HDLBP-229ENST00000460826 LRRC4BQ9NT99 713 aa18.46■□□□□ 0.55
HDLBP-229ENST00000460826 TRIM35Q9UPQ4 493 aa18.46■□□□□ 0.55
HDLBP-229ENST00000460826 SLC39A6Q13433 755 aa18.45■□□□□ 0.54
HDLBP-229ENST00000460826 C5P01031 1676 aa18.44■□□□□ 0.54
HDLBP-229ENST00000460826 KCPQ6ZWJ8 1503 aa18.44■□□□□ 0.54
HDLBP-229ENST00000460826 KDM3BQ7LBC6 1761 aa18.43■□□□□ 0.54
HDLBP-229ENST00000460826 SLC4A9Q96Q91 983 aa18.43■□□□□ 0.54
HDLBP-229ENST00000460826 CCNL1Q9UK58 526 aaPredicted RBP18.43■□□□□ 0.54
HDLBP-229ENST00000460826 ZNF831Q5JPB2 1677 aa18.42■□□□□ 0.54
HDLBP-229ENST00000460826 TJP1Q07157 1748 aa18.42■□□□□ 0.54
HDLBP-229ENST00000460826 TUBGCP6Q96RT7 1819 aa18.42■□□□□ 0.54
HDLBP-229ENST00000460826 LOC102724428A0A0B4J2F2 783 aa18.41■□□□□ 0.54
HDLBP-229ENST00000460826 KCNQ3O43525 872 aa18.41■□□□□ 0.54
HDLBP-229ENST00000460826 SIK1P57059 783 aa18.41■□□□□ 0.54
HDLBP-229ENST00000460826 LMOD3Q0VAK6 560 aa18.41■□□□□ 0.54
HDLBP-229ENST00000460826 SLC27A3Q5K4L6 730 aa18.41■□□□□ 0.54
HDLBP-229ENST00000460826 RBM42Q9BTD8 480 aaKnown RBP18.41■□□□□ 0.54
HDLBP-229ENST00000460826 ANO8Q9HCE9 1232 aaPredicted RBP18.41■□□□□ 0.54
HDLBP-229ENST00000460826 COL5A3P25940 1745 aaPredicted RBP18.4■□□□□ 0.54
HDLBP-229ENST00000460826 PTCD1O75127 700 aaKnown RBP18.4■□□□□ 0.54
HDLBP-229ENST00000460826 MIS18AQ9NYP9 233 aa18.4■□□□□ 0.54
HDLBP-229ENST00000460826 CICQ96RK0 1608 aaPredicted RBP18.39■□□□□ 0.53
HDLBP-229ENST00000460826 BTBD11A6QL63 1104 aa18.39■□□□□ 0.53
HDLBP-229ENST00000460826 ITPK1Q13572 414 aa18.39■□□□□ 0.53
HDLBP-229ENST00000460826 TAF7Q15545 349 aaPredicted RBP18.39■□□□□ 0.53
HDLBP-229ENST00000460826 MYH14Q7Z406 1995 aaKnown RBP18.39■□□□□ 0.53
HDLBP-229ENST00000460826 C4BP0C0L5 1744 aa18.38■□□□□ 0.53
HDLBP-229ENST00000460826 ATP6V1AP38606 617 aa18.38■□□□□ 0.53
HDLBP-229ENST00000460826 ZNF790Q6PG37 636 aa18.38■□□□□ 0.53
HDLBP-229ENST00000460826 ZNF827Q17R98 1081 aa18.37■□□□□ 0.53
HDLBP-229ENST00000460826 TTC5Q8N0Z6 440 aa18.36■□□□□ 0.53
HDLBP-229ENST00000460826 LINC00116Q8NCU8 138 aa18.36■□□□□ 0.53
HDLBP-229ENST00000460826 ZNF496Q96IT1 587 aaPredicted RBP18.36■□□□□ 0.53
HDLBP-229ENST00000460826 SALL2Q9Y467 1007 aaPredicted RBP18.36■□□□□ 0.53
HDLBP-229ENST00000460826 UBR3Q6ZT12 1888 aa18.35■□□□□ 0.53
HDLBP-229ENST00000460826 PSDA5PKW4 1024 aaPredicted RBP18.35■□□□□ 0.53
HDLBP-229ENST00000460826 NBPF14Q5TI25 921 aa18.35■□□□□ 0.53
HDLBP-229ENST00000460826 AKT1S1Q96B36 256 aa18.35■□□□□ 0.53
HDLBP-229ENST00000460826 QSER1Q2KHR3 1735 aa18.35■□□□□ 0.53
HDLBP-229ENST00000460826 R3HDM1Q15032 1099 aaKnown RBP18.34■□□□□ 0.53
HDLBP-229ENST00000460826 CCDC27Q2M243 656 aa18.34■□□□□ 0.53
HDLBP-229ENST00000460826 DNAJC10Q8IXB1 793 aa18.34■□□□□ 0.53
HDLBP-229ENST00000460826 STK32BQ9NY57 414 aa18.34■□□□□ 0.53
HDLBP-229ENST00000460826 HEG1Q9ULI3 1381 aa18.33■□□□□ 0.53
HDLBP-229ENST00000460826 SLC15A2Q16348 729 aa18.33■□□□□ 0.52
HDLBP-229ENST00000460826 WWC1Q8IX03 1113 aa18.33■□□□□ 0.52
HDLBP-229ENST00000460826 NCBP3Q53F19 620 aaKnown RBP18.32■□□□□ 0.52
HDLBP-229ENST00000460826 FMNL2Q96PY5 1086 aa18.32■□□□□ 0.52
HDLBP-229ENST00000460826 TSPYL4Q9UJ04 414 aa18.32■□□□□ 0.52
HDLBP-229ENST00000460826 LAS1LQ9Y4W2 734 aaKnown RBP18.32■□□□□ 0.52
HDLBP-229ENST00000460826 PRAMEF22A3QJZ6 481 aa18.31■□□□□ 0.52
HDLBP-229ENST00000460826 CHL1O00533 1208 aa18.31■□□□□ 0.52
HDLBP-229ENST00000460826 VSIG10Q8N0Z9 540 aa18.31■□□□□ 0.52
HDLBP-229ENST00000460826 CASZ1Q86V15 1759 aa18.31■□□□□ 0.52
HDLBP-229ENST00000460826 LAMB4A4D0S4 1761 aa18.3■□□□□ 0.52
HDLBP-229ENST00000460826 ZNF853P0CG23 659 aa18.3■□□□□ 0.52
HDLBP-229ENST00000460826 EIF4A1P60842 406 aaKnown RBP18.3■□□□□ 0.52
HDLBP-229ENST00000460826 AMIGO3Q86WK7 504 aa18.3■□□□□ 0.52
HDLBP-229ENST00000460826 SMIM5Q71RC9 77 aa18.29■□□□□ 0.52
HDLBP-229ENST00000460826 CFAP44Q96MT7 982 aa18.29■□□□□ 0.52
HDLBP-229ENST00000460826 PDGFDQ9GZP0 370 aaPredicted RBP18.29■□□□□ 0.52
HDLBP-229ENST00000460826 BABAM1Q9NWV8 329 aa18.29■□□□□ 0.52
HDLBP-229ENST00000460826 CYP19A1P11511 503 aaPredicted RBP18.28■□□□□ 0.52
HDLBP-229ENST00000460826 AK7Q96M32 723 aa18.28■□□□□ 0.52
HDLBP-229ENST00000460826 MBIPQ9NS73 344 aa18.28■□□□□ 0.52
HDLBP-229ENST00000460826 IFT57Q9NWB7 429 aa18.28■□□□□ 0.52
HDLBP-229ENST00000460826 PNPLA7Q6ZV29 1317 aa18.27■□□□□ 0.52
HDLBP-229ENST00000460826 CNTNAP4Q9C0A0 1308 aa18.27■□□□□ 0.52
HDLBP-229ENST00000460826 CRKLP46109 303 aaKnown RBP18.27■□□□□ 0.52
HDLBP-229ENST00000460826 GNAI1P63096 354 aa18.27■□□□□ 0.52
HDLBP-229ENST00000460826 CALD1Q05682 793 aaKnown RBP18.27■□□□□ 0.52
HDLBP-229ENST00000460826 TFCP2L1Q9NZI6 479 aa18.27■□□□□ 0.52
HDLBP-229ENST00000460826 USP16Q9Y5T5 823 aa18.27■□□□□ 0.52
HDLBP-229ENST00000460826 ZNF521Q96K83 1311 aa18.26■□□□□ 0.51
HDLBP-229ENST00000460826 GNPATO15228 680 aa18.26■□□□□ 0.51
HDLBP-229ENST00000460826 KRT24Q2M2I5 525 aa18.26■□□□□ 0.51
HDLBP-229ENST00000460826 RC3H1Q5TC82 1133 aaKnown RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms